IMCISION DNAseq

Whole-exome sequencing of 32 primary head and neck squamous cell carcinoma samples prior to treatment with neoadjuvant anti-PD-1 (n=6) or anti-PD-1 + anti-CTLA-4 (n=26) immunotherapy. DNA quantity used: 50ng. Library Preparation Kit: Twist Human Core Exome Plus (Twist Bioscience). Sequencing parameters: NovaSeq 6000, 2x 100 bp. File type: fastQ.

20/09/2021
64 samples
DAC: EGAC00001002231
Technology: Illumina NovaSeq 6000

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Netherlands Cancer Institute

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001005466	IMCISION DNAseq	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size	Quality Report
EGAF00005482535	fastq.gz	3.3 GB	Report
EGAF00005482536	fastq.gz	3.5 GB	Report
EGAF00005482537	fastq.gz	4.0 GB	Report
EGAF00005482538	fastq.gz	4.1 GB	Report
EGAF00005482539	fastq.gz	11.0 GB	Report
EGAF00005482540	fastq.gz	11.1 GB	Report
EGAF00005482541	fastq.gz	9.1 GB	Report
EGAF00005482542	fastq.gz	9.2 GB	Report
EGAF00005482545	fastq.gz	8.7 GB	Report
EGAF00005482546	fastq.gz	8.8 GB	Report
EGAF00005482551	fastq.gz	3.6 GB	Report
EGAF00005482552	fastq.gz	3.7 GB	Report
EGAF00005482553	fastq.gz	3.9 GB	Report
EGAF00005482554	fastq.gz	4.0 GB	Report
EGAF00005482555	fastq.gz	11.9 GB	Report
EGAF00005482556	fastq.gz	12.1 GB	Report
EGAF00005482557	fastq.gz	4.4 GB	Report
EGAF00005482558	fastq.gz	4.5 GB	Report
EGAF00005482563	fastq.gz	3.6 GB	Report
EGAF00005482564	fastq.gz	3.8 GB	Report
EGAF00005482567	fastq.gz	3.6 GB	Report
EGAF00005482568	fastq.gz	3.7 GB	Report
EGAF00005482569	fastq.gz	4.3 GB	Report
EGAF00005482570	fastq.gz	4.4 GB	Report
EGAF00005482571	fastq.gz	3.5 GB	Report
EGAF00005482572	fastq.gz	3.6 GB	Report
EGAF00005482575	fastq.gz	10.5 GB	Report
EGAF00005482576	fastq.gz	10.7 GB	Report
EGAF00005482577	fastq.gz	3.3 GB	Report
EGAF00005482578	fastq.gz	3.4 GB	Report
EGAF00005482581	fastq.gz	10.3 GB	Report
EGAF00005482582	fastq.gz	10.4 GB	Report
EGAF00005482585	fastq.gz	3.5 GB	Report
EGAF00005482586	fastq.gz	3.6 GB	Report
EGAF00005482587	fastq.gz	3.2 GB	Report
EGAF00005482588	fastq.gz	3.3 GB	Report
EGAF00005482591	fastq.gz	5.3 GB	Report
EGAF00005482592	fastq.gz	5.5 GB	Report
EGAF00005482601	fastq.gz	4.0 GB	Report
EGAF00005482602	fastq.gz	4.1 GB	Report
EGAF00005482603	fastq.gz	4.0 GB	Report
EGAF00005482604	fastq.gz	4.2 GB	Report
EGAF00005482605	fastq.gz	3.6 GB	Report
EGAF00005482606	fastq.gz	3.8 GB	Report
EGAF00005482609	fastq.gz	3.5 GB	Report
EGAF00005482610	fastq.gz	3.6 GB	Report
EGAF00005482611	fastq.gz	7.9 GB	Report
EGAF00005482612	fastq.gz	7.9 GB	Report
EGAF00005482619	fastq.gz	3.5 GB	Report
EGAF00005482620	fastq.gz	3.7 GB	Report
EGAF00005482621	fastq.gz	5.6 GB	Report
EGAF00005482622	fastq.gz	5.8 GB	Report
EGAF00005482623	fastq.gz	11.1 GB	Report
EGAF00005482624	fastq.gz	11.3 GB	Report
EGAF00005482625	fastq.gz	4.3 GB	Report
EGAF00005482626	fastq.gz	4.5 GB	Report
EGAF00005482627	fastq.gz	11.6 GB	Report
EGAF00005482628	fastq.gz	11.8 GB	Report
EGAF00005482629	fastq.gz	9.8 GB	Report
EGAF00005482630	fastq.gz	9.9 GB	Report
EGAF00005482631	fastq.gz	11.0 GB	Report
EGAF00005482632	fastq.gz	11.1 GB	Report
EGAF00005482633	fastq.gz	11.9 GB	Report
EGAF00005482634	fastq.gz	12.6 GB	Report
EGAF00005482635	fastq.gz	9.5 GB	Report
EGAF00005482636	fastq.gz	9.6 GB	Report
EGAF00005482643	fastq.gz	4.4 GB	Report
EGAF00005482644	fastq.gz	4.6 GB	Report
EGAF00005482645	fastq.gz	11.3 GB	Report
EGAF00005482646	fastq.gz	11.4 GB	Report
EGAF00005482647	fastq.gz	10.1 GB	Report
EGAF00005482648	fastq.gz	10.3 GB	Report
EGAF00005482657	fastq.gz	9.8 GB	Report
EGAF00005482658	fastq.gz	10.0 GB	Report
EGAF00005482659	fastq.gz	3.6 GB	Report
EGAF00005482660	fastq.gz	3.8 GB	Report
EGAF00005482661	fastq.gz	3.3 GB	Report
EGAF00005482662	fastq.gz	3.4 GB	Report
EGAF00005482667	fastq.gz	3.2 GB	Report
EGAF00005482668	fastq.gz	3.3 GB	Report
EGAF00005482675	fastq.gz	11.2 GB	Report
EGAF00005482676	fastq.gz	11.3 GB	Report
EGAF00005482677	fastq.gz	4.2 GB	Report
EGAF00005482678	fastq.gz	4.3 GB	Report
EGAF00005482679	fastq.gz	3.9 GB	Report
EGAF00005482680	fastq.gz	4.1 GB	Report
EGAF00005482681	fastq.gz	14.2 GB	Report
EGAF00005482682	fastq.gz	14.4 GB	Report
EGAF00005482683	fastq.gz	3.4 GB	Report
EGAF00005482684	fastq.gz	3.6 GB	Report
EGAF00005482685	fastq.gz	11.0 GB	Report
EGAF00005482686	fastq.gz	11.1 GB	Report
EGAF00005482689	fastq.gz	8.8 GB	Report
EGAF00005482690	fastq.gz	9.0 GB	Report
EGAF00005482691	fastq.gz	8.6 GB	Report
EGAF00005482692	fastq.gz	8.7 GB	Report
EGAF00005482697	fastq.gz	3.7 GB	Report
EGAF00005482698	fastq.gz	3.8 GB	Report
EGAF00005482699	fastq.gz	3.3 GB	Report
EGAF00005482700	fastq.gz	3.4 GB	Report
EGAF00005482701	fastq.gz	8.0 GB	Report
EGAF00005482702	fastq.gz	8.3 GB	Report
EGAF00005482703	fastq.gz	10.7 GB	Report
EGAF00005482704	fastq.gz	10.8 GB	Report
EGAF00005482705	fastq.gz	7.9 GB	Report
EGAF00005482706	fastq.gz	8.2 GB	Report
EGAF00005482707	fastq.gz	9.4 GB	Report
EGAF00005482708	fastq.gz	9.6 GB	Report
EGAF00005482721	fastq.gz	9.5 GB	Report
EGAF00005482722	fastq.gz	9.7 GB	Report
EGAF00005482725	fastq.gz	11.2 GB	Report
EGAF00005482726	fastq.gz	11.5 GB	Report
EGAF00005482729	fastq.gz	9.3 GB	Report
EGAF00005482730	fastq.gz	9.4 GB	Report
EGAF00005482755	fastq.gz	4.1 GB	Report
EGAF00005482756	fastq.gz	4.3 GB	Report
EGAF00005482757	fastq.gz	10.0 GB	Report
EGAF00005482758	fastq.gz	10.1 GB	Report
EGAF00005482759	fastq.gz	11.6 GB	Report
EGAF00005482760	fastq.gz	11.7 GB	Report
EGAF00005482761	fastq.gz	12.2 GB	Report
EGAF00005482762	fastq.gz	12.5 GB	Report
EGAF00005482763	fastq.gz	3.1 GB	Report
EGAF00005482764	fastq.gz	3.3 GB	Report
EGAF00005482765	fastq.gz	9.7 GB	Report
EGAF00005482766	fastq.gz	9.8 GB	Report
EGAF00005484140	fastq.gz	5.1 GB	Report
EGAF00005484141	fastq.gz	5.2 GB	Report
128 Files (914.1 GB)