Human normal esophagus and Barrett's esophagus mtDNA sequencing

Dataset ID Technology Samples
EGAD00001008310 Illumina MiSeq 80

Dataset Description

BAM files containing paired-end mtDNA sequencing data from human esophageal samples of individuals that had progressed to dysplasia or developed Barrett's esophagus (BE) post-esophagectomy. BE biopsies and the background mucosa were analysed. Each patient (JE*) has associated mtDNA sequencing data from biopsies of stroma, BE and squamous and cardia tissue. Two technical replicates, denoted "A" and "B", were analysed for each biopsy. Libraries were sequenced via the Illumina MiSeq platform v2 (Illumina, San Diego, CA, USA) 300 cycles (150 nt paired-end).

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Queen Mary University of London Information Security Management Team
Contact person: Araripe Garboggini
Email: bcc-ismt [at] qmul [dot] ac [dot] uk
More details: EGAC00001002266


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