About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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sWGS of core biopsies from localized breast cancer patients

Paired end shallow whole genome sequencing (sWGS) data for the identification of genomewide somatic copy number alterations (SCNA) and the estimation of tumor fractions.

Request Access

DUO:0000014
version: 2019-01-07

research use only

This data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).

DUO:0000027
version: 2019-01-07

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

Liquid Biopsy Policy

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to the studies, conducted from the Liquid Biopsy group at the D&R Institute of Human Genetics (Medical University of Graz, Austria) which have been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is a Postdoctoral Fellow and is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer (ellen.heitzer@medunigraz.at) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005798 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005724133 fastq.gz 470.1 MB Report
EGAF00005724134 fastq.gz 498.1 MB Report
EGAF00005724135 fastq.gz 288.9 MB Report
EGAF00005724136 fastq.gz 301.8 MB Report
EGAF00005724137 fastq.gz 384.2 MB Report
EGAF00005724138 fastq.gz 393.4 MB Report
EGAF00005724139 fastq.gz 357.7 MB Report
EGAF00005724140 fastq.gz 370.9 MB Report
EGAF00005724141 fastq.gz 422.0 MB Report
EGAF00005724142 fastq.gz 440.6 MB Report
EGAF00005724143 fastq.gz 371.0 MB Report
EGAF00005724144 fastq.gz 386.3 MB Report
EGAF00005724145 fastq.gz 428.1 MB Report
EGAF00005724146 fastq.gz 434.1 MB Report
EGAF00005724147 fastq.gz 516.0 MB Report
EGAF00005724148 fastq.gz 537.8 MB Report
EGAF00005724149 fastq.gz 258.4 MB Report
EGAF00005724150 fastq.gz 265.5 MB Report
EGAF00005724151 fastq.gz 338.2 MB Report
EGAF00005724152 fastq.gz 351.0 MB Report
EGAF00005724153 fastq.gz 390.8 MB Report
EGAF00005724154 fastq.gz 396.9 MB Report
EGAF00005724155 fastq.gz 493.6 MB Report
EGAF00005724156 fastq.gz 520.9 MB Report
EGAF00005724157 fastq.gz 396.7 MB Report
EGAF00005724158 fastq.gz 407.0 MB Report
EGAF00005724159 fastq.gz 551.7 MB Report
EGAF00005724160 fastq.gz 570.0 MB Report
EGAF00005724161 fastq.gz 433.1 MB Report
EGAF00005724162 fastq.gz 446.2 MB Report
EGAF00005724163 fastq.gz 325.9 MB Report
EGAF00005724164 fastq.gz 338.8 MB Report
EGAF00005724165 fastq.gz 354.1 MB Report
EGAF00005724166 fastq.gz 364.1 MB Report
EGAF00005724167 fastq.gz 329.8 MB Report
EGAF00005724168 fastq.gz 342.8 MB Report
EGAF00005724169 fastq.gz 326.9 MB Report
EGAF00005724170 fastq.gz 337.0 MB Report
EGAF00005724171 fastq.gz 247.4 MB Report
EGAF00005724172 fastq.gz 256.1 MB Report
EGAF00005724173 fastq.gz 369.8 MB Report
EGAF00005724174 fastq.gz 381.0 MB Report
EGAF00005724175 fastq.gz 645.3 MB Report
EGAF00005724176 fastq.gz 688.9 MB Report
EGAF00005724177 fastq.gz 288.5 MB Report
EGAF00005724178 fastq.gz 300.4 MB Report
EGAF00005724179 fastq.gz 343.7 MB Report
EGAF00005724180 fastq.gz 359.0 MB Report
EGAF00005724181 fastq.gz 369.4 MB Report
EGAF00005724182 fastq.gz 381.7 MB Report
EGAF00005724183 fastq.gz 281.9 MB Report
EGAF00005724184 fastq.gz 289.9 MB Report
EGAF00005724185 fastq.gz 316.6 MB Report
EGAF00005724186 fastq.gz 327.1 MB Report
EGAF00005724187 fastq.gz 510.2 MB Report
EGAF00005724188 fastq.gz 522.3 MB Report
EGAF00005724189 fastq.gz 305.5 MB Report
EGAF00005724190 fastq.gz 315.8 MB Report
EGAF00005724191 fastq.gz 510.6 MB Report
EGAF00005724192 fastq.gz 529.6 MB Report
EGAF00005724193 fastq.gz 356.1 MB Report
EGAF00005724194 fastq.gz 371.8 MB Report
EGAF00005724195 fastq.gz 336.6 MB Report
EGAF00005724196 fastq.gz 345.9 MB Report
EGAF00005724197 fastq.gz 309.7 MB Report
EGAF00005724198 fastq.gz 320.8 MB Report
EGAF00005724199 fastq.gz 310.6 MB Report
EGAF00005724200 fastq.gz 320.9 MB Report
EGAF00005724201 fastq.gz 232.3 MB Report
EGAF00005724202 fastq.gz 238.3 MB Report
EGAF00005724203 fastq.gz 282.0 MB Report
EGAF00005724204 fastq.gz 293.0 MB Report
EGAF00005724205 fastq.gz 337.7 MB Report
EGAF00005724206 fastq.gz 353.0 MB Report
EGAF00005724207 fastq.gz 327.7 MB Report
EGAF00005724208 fastq.gz 336.1 MB Report
EGAF00005724209 fastq.gz 215.9 MB Report
EGAF00005724210 fastq.gz 225.3 MB Report
EGAF00005724211 fastq.gz 346.7 MB Report
EGAF00005724212 fastq.gz 357.0 MB Report
EGAF00005724213 fastq.gz 577.4 MB Report
EGAF00005724214 fastq.gz 587.4 MB Report
EGAF00005724215 fastq.gz 510.1 MB Report
EGAF00005724216 fastq.gz 540.3 MB Report
EGAF00005724217 fastq.gz 308.0 MB Report
EGAF00005724218 fastq.gz 317.5 MB Report
EGAF00005724219 fastq.gz 441.1 MB Report
EGAF00005724220 fastq.gz 455.6 MB Report
EGAF00005724221 fastq.gz 259.3 MB Report
EGAF00005724222 fastq.gz 268.1 MB Report
EGAF00005724223 fastq.gz 348.8 MB Report
EGAF00005724224 fastq.gz 358.3 MB Report
EGAF00005724225 fastq.gz 298.1 MB Report
EGAF00005724226 fastq.gz 309.2 MB Report
EGAF00005724227 fastq.gz 354.7 MB Report
EGAF00005724228 fastq.gz 366.1 MB Report
EGAF00005724229 fastq.gz 275.1 MB Report
EGAF00005724230 fastq.gz 281.7 MB Report
EGAF00005724231 fastq.gz 357.6 MB Report
EGAF00005724232 fastq.gz 373.6 MB Report
EGAF00005724233 fastq.gz 420.0 MB Report
EGAF00005724234 fastq.gz 429.6 MB Report
EGAF00005724235 fastq.gz 478.1 MB Report
EGAF00005724236 fastq.gz 491.6 MB Report
EGAF00005724237 fastq.gz 450.5 MB Report
EGAF00005724238 fastq.gz 474.5 MB Report
EGAF00005724239 fastq.gz 405.1 MB Report
EGAF00005724240 fastq.gz 421.8 MB Report
EGAF00005724241 fastq.gz 301.7 MB Report
EGAF00005724242 fastq.gz 312.6 MB Report
EGAF00005724243 fastq.gz 384.1 MB Report
EGAF00005724244 fastq.gz 402.8 MB Report
EGAF00005724245 fastq.gz 351.0 MB Report
EGAF00005724246 fastq.gz 362.2 MB Report
EGAF00005724247 fastq.gz 346.4 MB Report
EGAF00005724248 fastq.gz 360.2 MB Report
EGAF00005724249 fastq.gz 366.9 MB Report
EGAF00005724250 fastq.gz 372.9 MB Report
EGAF00005724251 fastq.gz 404.2 MB Report
EGAF00005724252 fastq.gz 418.8 MB Report
EGAF00005724253 fastq.gz 254.1 MB Report
EGAF00005724254 fastq.gz 263.7 MB Report
EGAF00005724255 fastq.gz 261.1 MB Report
EGAF00005724256 fastq.gz 270.2 MB Report
EGAF00005724257 fastq.gz 360.0 MB Report
EGAF00005724258 fastq.gz 370.2 MB Report
EGAF00005724259 fastq.gz 282.8 MB Report
EGAF00005724260 fastq.gz 293.1 MB Report
EGAF00005724261 fastq.gz 380.5 MB Report
EGAF00005724262 fastq.gz 391.6 MB Report
EGAF00005724263 fastq.gz 460.6 MB Report
EGAF00005724264 fastq.gz 492.9 MB Report
EGAF00005724265 fastq.gz 366.3 MB Report
EGAF00005724266 fastq.gz 377.8 MB Report
EGAF00005724267 fastq.gz 355.1 MB Report
EGAF00005724268 fastq.gz 369.2 MB Report
EGAF00005724269 fastq.gz 428.3 MB Report
EGAF00005724270 fastq.gz 438.9 MB Report
EGAF00005724271 fastq.gz 375.3 MB Report
EGAF00005724272 fastq.gz 393.2 MB Report
EGAF00005724273 fastq.gz 353.1 MB Report
EGAF00005724274 fastq.gz 365.1 MB Report
EGAF00005724275 fastq.gz 223.2 MB Report
EGAF00005724276 fastq.gz 231.1 MB Report
EGAF00005724277 fastq.gz 288.8 MB Report
EGAF00005724278 fastq.gz 298.4 MB Report
EGAF00005724279 fastq.gz 459.7 MB Report
EGAF00005724280 fastq.gz 475.6 MB Report
EGAF00005724281 fastq.gz 388.0 MB Report
EGAF00005724282 fastq.gz 395.2 MB Report
EGAF00005724283 fastq.gz 272.6 MB Report
EGAF00005724284 fastq.gz 279.8 MB Report
EGAF00005724285 fastq.gz 470.5 MB Report
EGAF00005724286 fastq.gz 503.5 MB Report
EGAF00005724287 fastq.gz 346.7 MB Report
EGAF00005724288 fastq.gz 355.8 MB Report
EGAF00005724289 fastq.gz 354.6 MB Report
EGAF00005724290 fastq.gz 362.3 MB Report
EGAF00005724291 fastq.gz 452.6 MB Report
EGAF00005724292 fastq.gz 475.7 MB Report
EGAF00005724293 fastq.gz 363.2 MB Report
EGAF00005724294 fastq.gz 381.0 MB Report
EGAF00005724295 fastq.gz 311.6 MB Report
EGAF00005724296 fastq.gz 322.5 MB Report
EGAF00005724297 fastq.gz 362.5 MB Report
EGAF00005724298 fastq.gz 368.9 MB Report
EGAF00005724299 fastq.gz 320.1 MB Report
EGAF00005724300 fastq.gz 328.1 MB Report
EGAF00005724301 fastq.gz 480.7 MB Report
EGAF00005724302 fastq.gz 512.4 MB Report
EGAF00005724303 fastq.gz 671.2 MB Report
EGAF00005724304 fastq.gz 679.5 MB Report
EGAF00005724305 fastq.gz 389.9 MB Report
EGAF00005724306 fastq.gz 406.6 MB Report
EGAF00005724307 fastq.gz 387.7 MB Report
EGAF00005724308 fastq.gz 396.1 MB Report
EGAF00005724309 fastq.gz 372.8 MB Report
EGAF00005724310 fastq.gz 384.1 MB Report
EGAF00005724311 fastq.gz 309.5 MB Report
EGAF00005724312 fastq.gz 326.5 MB Report
EGAF00005724313 fastq.gz 389.1 MB Report
EGAF00005724314 fastq.gz 412.3 MB Report
EGAF00005724315 fastq.gz 366.7 MB Report
EGAF00005724316 fastq.gz 384.8 MB Report
EGAF00005724317 fastq.gz 454.0 MB Report
EGAF00005724318 fastq.gz 480.6 MB Report
EGAF00005724319 fastq.gz 593.4 MB Report
EGAF00005724320 fastq.gz 602.3 MB Report
EGAF00005724321 fastq.gz 499.6 MB Report
EGAF00005724322 fastq.gz 526.0 MB Report
EGAF00005724323 fastq.gz 396.2 MB Report
EGAF00005724324 fastq.gz 423.5 MB Report
EGAF00005724325 fastq.gz 367.9 MB Report
EGAF00005724326 fastq.gz 380.0 MB Report
EGAF00005724327 fastq.gz 354.3 MB Report
EGAF00005724328 fastq.gz 363.6 MB Report
EGAF00005724329 fastq.gz 376.7 MB Report
EGAF00005724330 fastq.gz 394.9 MB Report
EGAF00005724331 fastq.gz 410.3 MB Report
EGAF00005724332 fastq.gz 436.1 MB Report
EGAF00005724333 fastq.gz 362.6 MB Report
EGAF00005724334 fastq.gz 384.8 MB Report
EGAF00005724335 fastq.gz 418.8 MB Report
EGAF00005724336 fastq.gz 440.5 MB Report
EGAF00005724337 fastq.gz 353.9 MB
EGAF00005724338 fastq.gz 371.6 MB Report
EGAF00005724339 fastq.gz 292.0 MB Report
EGAF00005724340 fastq.gz 304.9 MB Report
EGAF00005724341 fastq.gz 230.2 MB Report
EGAF00005724342 fastq.gz 238.8 MB Report
EGAF00005724343 fastq.gz 258.4 MB Report
EGAF00005724344 fastq.gz 268.2 MB Report
EGAF00005724345 fastq.gz 367.4 MB Report
EGAF00005724346 fastq.gz 377.1 MB Report
EGAF00005724347 fastq.gz 322.7 MB Report
EGAF00005724348 fastq.gz 336.6 MB Report
EGAF00005724349 fastq.gz 307.8 MB Report
EGAF00005724350 fastq.gz 318.5 MB Report
EGAF00005724351 fastq.gz 319.8 MB Report
EGAF00005724352 fastq.gz 331.6 MB Report
EGAF00005724353 fastq.gz 375.1 MB Report
EGAF00005724354 fastq.gz 389.4 MB Report
EGAF00005724355 fastq.gz 262.9 MB Report
EGAF00005724356 fastq.gz 271.9 MB Report
EGAF00005724357 fastq.gz 241.8 MB Report
EGAF00005724358 fastq.gz 252.5 MB Report
EGAF00005724359 fastq.gz 381.9 MB Report
EGAF00005724360 fastq.gz 406.9 MB Report
EGAF00005724361 fastq.gz 449.3 MB Report
EGAF00005724362 fastq.gz 477.0 MB Report
EGAF00005724363 fastq.gz 253.4 MB Report
EGAF00005724364 fastq.gz 262.6 MB Report
EGAF00005724365 fastq.gz 374.4 MB Report
EGAF00005724366 fastq.gz 387.5 MB Report
EGAF00005724367 fastq.gz 248.2 MB Report
EGAF00005724368 fastq.gz 259.9 MB Report
EGAF00005724369 fastq.gz 264.8 MB Report
EGAF00005724370 fastq.gz 278.0 MB Report
EGAF00005724371 fastq.gz 392.3 MB Report
EGAF00005724372 fastq.gz 404.2 MB Report
EGAF00005724373 fastq.gz 460.9 MB Report
EGAF00005724374 fastq.gz 464.3 MB Report
EGAF00005724375 fastq.gz 417.1 MB Report
EGAF00005724376 fastq.gz 430.5 MB Report
EGAF00005724377 fastq.gz 232.9 MB Report
EGAF00005724378 fastq.gz 242.5 MB Report
EGAF00005724379 fastq.gz 351.5 MB Report
EGAF00005724380 fastq.gz 361.1 MB Report
EGAF00005724381 fastq.gz 279.2 MB Report
EGAF00005724382 fastq.gz 297.3 MB Report
EGAF00005724383 fastq.gz 401.3 MB Report
EGAF00005724384 fastq.gz 413.4 MB Report
EGAF00005724385 fastq.gz 295.0 MB Report
EGAF00005724386 fastq.gz 306.8 MB Report
EGAF00005724387 fastq.gz 322.9 MB Report
EGAF00005724388 fastq.gz 333.8 MB Report
EGAF00005724389 fastq.gz 316.5 MB Report
EGAF00005724390 fastq.gz 329.6 MB Report
EGAF00005724391 fastq.gz 340.5 MB Report
EGAF00005724392 fastq.gz 350.9 MB Report
EGAF00005724393 fastq.gz 376.8 MB Report
EGAF00005724394 fastq.gz 397.9 MB Report
EGAF00005724395 fastq.gz 291.3 MB Report
EGAF00005724396 fastq.gz 309.3 MB Report
EGAF00005724397 fastq.gz 327.3 MB Report
EGAF00005724398 fastq.gz 337.1 MB Report
EGAF00005724399 fastq.gz 365.6 MB Report
EGAF00005724400 fastq.gz 373.0 MB Report
EGAF00005724401 fastq.gz 344.6 MB Report
EGAF00005724402 fastq.gz 367.5 MB Report
EGAF00005724403 fastq.gz 431.7 MB Report
EGAF00005724404 fastq.gz 441.7 MB Report
EGAF00005724405 fastq.gz 448.2 MB Report
EGAF00005724406 fastq.gz 458.4 MB Report
EGAF00005724407 fastq.gz 630.0 MB Report
EGAF00005724408 fastq.gz 690.1 MB Report
EGAF00005724409 fastq.gz 330.5 MB Report
EGAF00005724410 fastq.gz 348.2 MB Report
EGAF00005724411 fastq.gz 551.7 MB Report
EGAF00005724412 fastq.gz 556.5 MB Report
EGAF00005724413 fastq.gz 325.4 MB Report
EGAF00005724414 fastq.gz 334.3 MB Report
EGAF00005724415 fastq.gz 428.9 MB Report
EGAF00005724416 fastq.gz 451.4 MB Report
EGAF00005724417 fastq.gz 567.3 MB Report
EGAF00005724418 fastq.gz 582.9 MB Report
EGAF00005724419 fastq.gz 327.5 MB Report
EGAF00005724420 fastq.gz 335.8 MB Report
EGAF00005724421 fastq.gz 286.7 MB Report
EGAF00005724422 fastq.gz 296.3 MB Report
EGAF00005724423 fastq.gz 334.7 MB Report
EGAF00005724424 fastq.gz 345.6 MB Report
EGAF00005724425 fastq.gz 330.7 MB Report
EGAF00005724426 fastq.gz 351.1 MB Report
EGAF00005724427 fastq.gz 363.0 MB Report
EGAF00005724428 fastq.gz 379.1 MB Report
EGAF00005724429 fastq.gz 281.2 MB Report
EGAF00005724430 fastq.gz 300.5 MB Report
EGAF00005724431 fastq.gz 586.8 MB Report
EGAF00005724432 fastq.gz 597.5 MB Report
EGAF00005724433 fastq.gz 276.1 MB Report
EGAF00005724434 fastq.gz 292.0 MB Report
EGAF00005724435 fastq.gz 328.8 MB Report
EGAF00005724436 fastq.gz 337.7 MB Report
EGAF00005724437 fastq.gz 303.6 MB Report
EGAF00005724438 fastq.gz 317.7 MB Report
EGAF00005724439 fastq.gz 1.0 GB Report
EGAF00005724440 fastq.gz 1.0 GB Report
EGAF00005724441 fastq.gz 368.1 MB Report
EGAF00005724442 fastq.gz 377.9 MB Report
EGAF00005724443 fastq.gz 407.4 MB Report
EGAF00005724444 fastq.gz 413.3 MB Report
EGAF00005724445 fastq.gz 321.6 MB Report
EGAF00005724446 fastq.gz 337.0 MB Report
EGAF00005724447 fastq.gz 408.8 MB Report
EGAF00005724448 fastq.gz 430.1 MB Report
EGAF00005724449 fastq.gz 440.3 MB Report
EGAF00005724450 fastq.gz 451.3 MB Report
EGAF00005724451 fastq.gz 279.0 MB Report
EGAF00005724452 fastq.gz 294.4 MB Report
EGAF00005724453 fastq.gz 377.7 MB Report
EGAF00005724454 fastq.gz 391.5 MB Report
EGAF00005724455 fastq.gz 339.3 MB Report
EGAF00005724456 fastq.gz 357.2 MB Report
EGAF00005724457 fastq.gz 390.4 MB Report
EGAF00005724458 fastq.gz 408.6 MB Report
EGAF00005724459 fastq.gz 419.6 MB Report
EGAF00005724460 fastq.gz 427.2 MB Report
EGAF00005724461 fastq.gz 389.6 MB Report
EGAF00005724462 fastq.gz 409.7 MB Report
EGAF00005724463 fastq.gz 382.1 MB Report
EGAF00005724464 fastq.gz 400.6 MB Report
EGAF00005724465 fastq.gz 410.7 MB Report
EGAF00005724466 fastq.gz 419.5 MB Report
EGAF00005724467 fastq.gz 331.6 MB Report
EGAF00005724468 fastq.gz 339.8 MB Report
EGAF00005724469 fastq.gz 253.1 MB Report
EGAF00005724470 fastq.gz 264.5 MB Report
EGAF00005724471 fastq.gz 335.5 MB Report
EGAF00005724472 fastq.gz 351.3 MB Report
EGAF00005724473 fastq.gz 261.3 MB Report
EGAF00005724474 fastq.gz 272.5 MB Report
EGAF00005724475 fastq.gz 308.5 MB Report
EGAF00005724476 fastq.gz 324.7 MB Report
EGAF00005724477 fastq.gz 277.9 MB Report
EGAF00005724478 fastq.gz 287.6 MB Report
EGAF00005724479 fastq.gz 223.3 MB Report
EGAF00005724480 fastq.gz 234.5 MB Report
EGAF00005724481 fastq.gz 258.4 MB Report
EGAF00005724482 fastq.gz 270.0 MB Report
EGAF00005724483 fastq.gz 667.0 MB Report
EGAF00005724484 fastq.gz 683.3 MB Report
EGAF00005724485 fastq.gz 231.6 MB Report
EGAF00005724486 fastq.gz 243.0 MB Report
EGAF00005724487 fastq.gz 539.8 MB Report
EGAF00005724488 fastq.gz 562.2 MB Report
EGAF00005724489 fastq.gz 477.9 MB Report
EGAF00005724490 fastq.gz 508.0 MB Report
EGAF00005724491 fastq.gz 409.9 MB Report
EGAF00005724492 fastq.gz 416.1 MB Report
EGAF00005724493 fastq.gz 414.6 MB Report
EGAF00005724494 fastq.gz 434.3 MB Report
EGAF00005724495 fastq.gz 296.4 MB Report
EGAF00005724496 fastq.gz 308.3 MB Report
EGAF00005724497 fastq.gz 426.7 MB Report
EGAF00005724498 fastq.gz 438.8 MB Report
EGAF00005724499 fastq.gz 515.1 MB Report
EGAF00005724500 fastq.gz 526.3 MB Report
EGAF00005724501 fastq.gz 624.9 MB Report
EGAF00005724502 fastq.gz 659.3 MB Report
370 Files (141.0 GB)