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Single-cell RNA-seq of patient-derived organoids across three generations

Single-cell RNA-seq of first-, second-, and third-generation patient-derived organoids. Obtained using the 10X Genomics single-cell 3' expression solution (v3 chemistry). First- and second-generation PDOs from one patient and first-, second-, and third-generation PDOs from three additional patients.

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BC Cancer, part of the Provincial Health Services Authority - Data Access Policy

Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005227 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005742153 fastq.gz 4.0 GB
EGAF00005742154 fastq.gz 3.4 GB
EGAF00005742155 fastq.gz 3.8 GB
EGAF00005742156 fastq.gz 3.4 GB
EGAF00005742157 fastq.gz 3.5 GB
EGAF00005742158 fastq.gz 3.1 GB
EGAF00005742159 fastq.gz 3.9 GB
EGAF00005742160 fastq.gz 3.4 GB
EGAF00005742161 fastq.gz 4.0 GB
EGAF00005742162 fastq.gz 3.5 GB
EGAF00005742163 fastq.gz 3.9 GB
EGAF00005742164 fastq.gz 3.4 GB
EGAF00005742165 fastq.gz 3.9 GB
EGAF00005742166 fastq.gz 3.3 GB
EGAF00005742167 fastq.gz 3.8 GB
EGAF00005742168 fastq.gz 3.2 GB
EGAF00005742169 fastq.gz 3.4 GB
EGAF00005742170 fastq.gz 2.9 GB
EGAF00005742171 fastq.gz 3.6 GB
EGAF00005742172 fastq.gz 3.2 GB
EGAF00005742173 fastq.gz 3.7 GB
EGAF00005742174 fastq.gz 3.3 GB
EGAF00005742175 fastq.gz 3.8 GB
EGAF00005742176 fastq.gz 3.3 GB
EGAF00005742177 fastq.gz 3.6 GB
EGAF00005742178 fastq.gz 3.2 GB
EGAF00005742179 fastq.gz 3.3 GB
EGAF00005742180 fastq.gz 3.0 GB
EGAF00005742181 fastq.gz 3.7 GB
EGAF00005742182 fastq.gz 3.2 GB
EGAF00005742183 fastq.gz 3.8 GB
EGAF00005742184 fastq.gz 3.4 GB
EGAF00005742185 fastq.gz 3.7 GB
EGAF00005742186 fastq.gz 3.3 GB
EGAF00005742187 fastq.gz 3.6 GB
EGAF00005742188 fastq.gz 3.1 GB
EGAF00005742189 fastq.gz 3.6 GB
EGAF00005742190 fastq.gz 3.0 GB
EGAF00005742191 fastq.gz 3.2 GB
EGAF00005742192 fastq.gz 2.8 GB
EGAF00005742193 fastq.gz 3.4 GB
EGAF00005742194 fastq.gz 3.1 GB
EGAF00005742195 fastq.gz 3.6 GB
EGAF00005742196 fastq.gz 3.2 GB
EGAF00005742197 fastq.gz 3.9 GB
EGAF00005742198 fastq.gz 3.4 GB
EGAF00005742199 fastq.gz 3.7 GB
EGAF00005742200 fastq.gz 3.4 GB
EGAF00005742201 fastq.gz 3.4 GB
EGAF00005742202 fastq.gz 3.1 GB
EGAF00005742203 fastq.gz 3.8 GB
EGAF00005742204 fastq.gz 3.3 GB
EGAF00005742205 fastq.gz 3.9 GB
EGAF00005742206 fastq.gz 3.5 GB
EGAF00005742207 fastq.gz 3.8 GB
EGAF00005742208 fastq.gz 3.4 GB
EGAF00005742209 fastq.gz 3.7 GB
EGAF00005742210 fastq.gz 3.2 GB
EGAF00005742211 fastq.gz 3.7 GB
EGAF00005742212 fastq.gz 3.1 GB
EGAF00005742213 fastq.gz 3.3 GB
EGAF00005742214 fastq.gz 2.9 GB
EGAF00005742215 fastq.gz 3.5 GB
EGAF00005742216 fastq.gz 3.2 GB
EGAF00005742217 fastq.gz 3.7 GB
EGAF00005742218 fastq.gz 3.3 GB
EGAF00005742219 fastq.gz 3.6 GB
EGAF00005742220 fastq.gz 3.1 GB
EGAF00005742221 fastq.gz 3.5 GB
EGAF00005742222 fastq.gz 3.1 GB
EGAF00005742223 fastq.gz 3.2 GB
EGAF00005742224 fastq.gz 2.9 GB
EGAF00005742225 fastq.gz 3.6 GB
EGAF00005742226 fastq.gz 3.1 GB
EGAF00005742227 fastq.gz 3.6 GB
EGAF00005742228 fastq.gz 3.2 GB
EGAF00005742229 fastq.gz 3.5 GB
EGAF00005742230 fastq.gz 3.1 GB
EGAF00005742231 fastq.gz 3.5 GB
EGAF00005742232 fastq.gz 3.0 GB
EGAF00005742233 fastq.gz 3.4 GB
EGAF00005742234 fastq.gz 2.9 GB
EGAF00005742235 fastq.gz 3.1 GB
EGAF00005742236 fastq.gz 2.7 GB
EGAF00005742237 fastq.gz 3.3 GB
EGAF00005742238 fastq.gz 2.9 GB
EGAF00005742239 fastq.gz 3.4 GB
EGAF00005742240 fastq.gz 3.0 GB
88 Files (298.6 GB)