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Multi-region sequencing of RCC with VTT and metastasis using WES and RNAseq

This dataset contains multi-region sequencing of 16 RCC patients with venous tumor thrombus (VTT), 11 of which were either metastatic on diagnosis or recurred with metastasis. Whole exome sequencing is available for 94 samples across all 16 patients, including 1 matched normal sample per patient, 2-3 primary tumor samples per patient, 1-2 VTT samples per patient, and 0-3 metastasis samples per patient (metastatic lesions were only sampled for 8 of the 11 metastatic patients). RNAseq, generated by exome capture, is available for 67 samples across 12 patients, including 0-1 matched normal samples per patient, 3 primary tumor samples per patient, 0-1 VTT samples per patient, and 0-3 metastasis samples per patient (RNAseq was only available for 4 of the 8 patients from whom metastatic lesions were sampled).

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Please see provided URL: http://research-pub.gene.com/seqdata/dataAccess.html

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005897 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005744119 fastq.gz 3.0 GB
EGAF00005744120 fastq.gz 3.1 GB
EGAF00005744121 fq.gz 9.0 GB
EGAF00005744122 fq.gz 9.5 GB
EGAF00005744123 fq.gz 6.5 GB
EGAF00005744124 fq.gz 6.7 GB
EGAF00005744125 fastq.gz 2.1 GB
EGAF00005744126 fastq.gz 2.1 GB
EGAF00005744127 fastq.gz 2.4 GB
EGAF00005744128 fastq.gz 2.5 GB
EGAF00005744129 fastq.gz 5.2 GB
EGAF00005744130 fastq.gz 5.2 GB
EGAF00005744131 fastq.gz 2.2 GB
EGAF00005744132 fastq.gz 2.2 GB
EGAF00005744133 fq.gz 7.6 GB
EGAF00005744134 fq.gz 7.9 GB
EGAF00005744135 fastq.gz 2.4 GB
EGAF00005744136 fastq.gz 2.5 GB
EGAF00005744137 fastq.gz 2.2 GB
EGAF00005744138 fastq.gz 2.2 GB
EGAF00005744139 fastq.gz 2.2 GB
EGAF00005744140 fastq.gz 2.2 GB
EGAF00005744141 fastq.gz 2.7 GB
EGAF00005744142 fastq.gz 2.7 GB
EGAF00005744143 fastq.gz 3.0 GB
EGAF00005744144 fastq.gz 3.1 GB
EGAF00005744145 fq.gz 10.5 GB
EGAF00005744146 fq.gz 11.0 GB
EGAF00005744147 fastq.gz 2.8 GB
EGAF00005744148 fastq.gz 2.9 GB
EGAF00005744149 fastq.gz 5.4 GB
EGAF00005744150 fastq.gz 5.4 GB
EGAF00005744151 fastq.gz 5.9 GB
EGAF00005744152 fastq.gz 6.0 GB
EGAF00005744153 fastq.gz 5.7 GB
EGAF00005744154 fastq.gz 5.7 GB
EGAF00005744155 fastq.gz 5.4 GB
EGAF00005744156 fastq.gz 5.4 GB
EGAF00005744157 fastq.gz 5.6 GB
EGAF00005744158 fastq.gz 5.6 GB
EGAF00005744159 fastq.gz 3.4 GB
EGAF00005744160 fastq.gz 3.6 GB
EGAF00005744161 fastq.gz 5.5 GB
EGAF00005744162 fastq.gz 5.4 GB
EGAF00005744163 fastq.gz 5.2 GB
EGAF00005744164 fastq.gz 5.2 GB
EGAF00005744165 fastq.gz 3.0 GB
EGAF00005744166 fastq.gz 3.1 GB
EGAF00005744167 fastq.gz 5.3 GB
EGAF00005744168 fastq.gz 5.2 GB
EGAF00005744169 fastq.gz 2.0 GB
EGAF00005744170 fastq.gz 2.1 GB
EGAF00005744171 fastq.gz 2.2 GB
EGAF00005744172 fastq.gz 2.2 GB
EGAF00005744173 fq.gz 8.7 GB
EGAF00005744174 fq.gz 9.1 GB
EGAF00005744175 fastq.gz 5.2 GB
EGAF00005744176 fastq.gz 5.2 GB
EGAF00005744177 fastq.gz 2.4 GB
EGAF00005744178 fastq.gz 2.5 GB
EGAF00005744179 fastq.gz 2.2 GB
EGAF00005744180 fastq.gz 2.2 GB
EGAF00005744181 fastq.gz 6.0 GB
EGAF00005744182 fastq.gz 5.7 GB
EGAF00005744183 fastq.gz 5.3 GB
EGAF00005744184 fastq.gz 5.2 GB
EGAF00005744185 fastq.gz 6.1 GB
EGAF00005744186 fastq.gz 5.8 GB
EGAF00005744187 fastq.gz 5.3 GB
EGAF00005744188 fastq.gz 5.3 GB
EGAF00005744189 fastq.gz 5.5 GB
EGAF00005744190 fastq.gz 5.5 GB
EGAF00005744191 fastq.gz 2.5 GB
EGAF00005744192 fastq.gz 2.5 GB
EGAF00005744193 fastq.gz 5.7 GB
EGAF00005744194 fastq.gz 5.8 GB
EGAF00005744195 fastq.gz 5.4 GB
EGAF00005744196 fastq.gz 5.4 GB
EGAF00005744197 fastq.gz 3.0 GB
EGAF00005744198 fastq.gz 3.1 GB
EGAF00005744199 fastq.gz 5.7 GB
EGAF00005744200 fastq.gz 5.8 GB
EGAF00005744201 fastq.gz 2.3 GB
EGAF00005744202 fastq.gz 2.3 GB
EGAF00005744203 fastq.gz 4.7 GB
EGAF00005744204 fastq.gz 4.7 GB
EGAF00005744205 fastq.gz 2.3 GB
EGAF00005744206 fastq.gz 2.4 GB
EGAF00005744207 fastq.gz 2.2 GB
EGAF00005744208 fastq.gz 2.3 GB
EGAF00005744209 fastq.gz 5.5 GB
EGAF00005744210 fastq.gz 5.4 GB
EGAF00005744211 fastq.gz 5.2 GB
EGAF00005744212 fastq.gz 5.0 GB
EGAF00005744213 fastq.gz 2.3 GB
EGAF00005744214 fastq.gz 2.4 GB
EGAF00005744215 fastq.gz 5.6 GB
EGAF00005744216 fastq.gz 5.7 GB
EGAF00005744217 fastq.gz 2.2 GB
EGAF00005744218 fastq.gz 2.2 GB
EGAF00005744219 fq.gz 2.1 GB
EGAF00005744220 fq.gz 2.2 GB
EGAF00005744221 fastq.gz 5.3 GB
EGAF00005744222 fastq.gz 5.3 GB
EGAF00005744223 fq.gz 6.6 GB
EGAF00005744224 fq.gz 6.8 GB
EGAF00005744225 fastq.gz 5.4 GB
EGAF00005744226 fastq.gz 5.4 GB
EGAF00005744227 fastq.gz 2.5 GB
EGAF00005744228 fastq.gz 2.5 GB
EGAF00005744229 fastq.gz 5.6 GB
EGAF00005744230 fastq.gz 5.7 GB
EGAF00005744231 fq.gz 7.3 GB
EGAF00005744232 fq.gz 7.6 GB
EGAF00005744233 fq.gz 8.6 GB
EGAF00005744234 fq.gz 8.9 GB
EGAF00005744235 fq.gz 8.1 GB
EGAF00005744236 fq.gz 8.4 GB
EGAF00005744237 fastq.gz 2.8 GB
EGAF00005744238 fastq.gz 2.9 GB
EGAF00005744239 fastq.gz 2.9 GB
EGAF00005744240 fastq.gz 3.1 GB
EGAF00005744241 fastq.gz 2.2 GB
EGAF00005744242 fastq.gz 2.3 GB
EGAF00005744243 fastq.gz 1.9 GB
EGAF00005744244 fastq.gz 1.9 GB
EGAF00005744245 fastq.gz 2.5 GB
EGAF00005744246 fastq.gz 2.6 GB
EGAF00005744247 fastq.gz 2.1 GB
EGAF00005744248 fastq.gz 2.1 GB
EGAF00005744249 fastq.gz 2.7 GB
EGAF00005744250 fastq.gz 2.8 GB
EGAF00005744251 fastq.gz 5.6 GB
EGAF00005744252 fastq.gz 5.5 GB
EGAF00005744253 fastq.gz 2.0 GB
EGAF00005744254 fastq.gz 2.1 GB
EGAF00005744255 fastq.gz 2.2 GB
EGAF00005744256 fastq.gz 2.3 GB
EGAF00005744257 fastq.gz 2.9 GB
EGAF00005744258 fastq.gz 3.1 GB
EGAF00005744259 fastq.gz 2.0 GB
EGAF00005744260 fastq.gz 2.1 GB
EGAF00005744261 fastq.gz 3.0 GB
EGAF00005744262 fastq.gz 3.2 GB
EGAF00005744263 fastq.gz 3.2 GB
EGAF00005744264 fastq.gz 3.4 GB
EGAF00005744265 fq.gz 10.9 GB
EGAF00005744266 fq.gz 11.7 GB
EGAF00005744267 fastq.gz 5.2 GB
EGAF00005744268 fastq.gz 5.2 GB
EGAF00005744269 fastq.gz 5.4 GB
EGAF00005744270 fastq.gz 5.6 GB
EGAF00005744271 fq.gz 10.2 GB
EGAF00005744272 fq.gz 10.6 GB
EGAF00005744273 fq.gz 9.8 GB
EGAF00005744274 fq.gz 10.1 GB
EGAF00005744275 fastq.gz 5.7 GB
EGAF00005744276 fastq.gz 5.5 GB
EGAF00005744277 fastq.gz 5.2 GB
EGAF00005744278 fastq.gz 5.3 GB
EGAF00005744279 fastq.gz 6.0 GB
EGAF00005744280 fastq.gz 5.7 GB
EGAF00005744281 fastq.gz 5.5 GB
EGAF00005744282 fastq.gz 5.5 GB
EGAF00005744283 fastq.gz 2.5 GB
EGAF00005744284 fastq.gz 2.5 GB
EGAF00005744285 fastq.gz 5.5 GB
EGAF00005744286 fastq.gz 5.7 GB
EGAF00005744287 fastq.gz 5.3 GB
EGAF00005744288 fastq.gz 5.4 GB
EGAF00005744289 fastq.gz 2.1 GB
EGAF00005744290 fastq.gz 2.2 GB
EGAF00005744291 fastq.gz 2.3 GB
EGAF00005744292 fastq.gz 2.4 GB
EGAF00005744293 fastq.gz 5.5 GB
EGAF00005744294 fastq.gz 5.5 GB
EGAF00005744295 fastq.gz 5.6 GB
EGAF00005744296 fastq.gz 5.5 GB
EGAF00005744297 fastq.gz 6.2 GB
EGAF00005744298 fastq.gz 6.0 GB
EGAF00005744299 fastq.gz 5.4 GB
EGAF00005744300 fastq.gz 5.4 GB
EGAF00005744301 fastq.gz 6.2 GB
EGAF00005744302 fastq.gz 6.4 GB
EGAF00005744303 fastq.gz 5.4 GB
EGAF00005744304 fastq.gz 5.3 GB
EGAF00005744305 fastq.gz 5.7 GB
EGAF00005744306 fastq.gz 5.7 GB
EGAF00005744307 fastq.gz 3.1 GB
EGAF00005744308 fastq.gz 3.3 GB
EGAF00005744309 fastq.gz 5.5 GB
EGAF00005744310 fastq.gz 5.5 GB
EGAF00005744311 fastq.gz 5.6 GB
EGAF00005744312 fastq.gz 5.6 GB
EGAF00005744313 fq.gz 10.0 GB
EGAF00005744314 fq.gz 10.5 GB
EGAF00005744315 fastq.gz 2.4 GB
EGAF00005744316 fastq.gz 2.5 GB
EGAF00005744317 fq.gz 8.7 GB
EGAF00005744318 fq.gz 9.0 GB
EGAF00005744319 fastq.gz 5.5 GB
EGAF00005744320 fastq.gz 5.7 GB
EGAF00005744321 fastq.gz 5.5 GB
EGAF00005744322 fastq.gz 5.7 GB
EGAF00005744323 fastq.gz 5.6 GB
EGAF00005744324 fastq.gz 5.6 GB
EGAF00005744325 fastq.gz 2.7 GB
EGAF00005744326 fastq.gz 2.8 GB
EGAF00005744327 fq.gz 2.9 GB
EGAF00005744328 fq.gz 3.0 GB
EGAF00005744329 fastq.gz 2.3 GB
EGAF00005744330 fastq.gz 2.4 GB
EGAF00005744331 fastq.gz 2.2 GB
EGAF00005744332 fastq.gz 2.2 GB
EGAF00005744333 fastq.gz 2.1 GB
EGAF00005744334 fastq.gz 2.2 GB
EGAF00005744335 fastq.gz 2.4 GB
EGAF00005744336 fastq.gz 2.5 GB
EGAF00005744337 fastq.gz 2.5 GB
EGAF00005744338 fastq.gz 2.5 GB
EGAF00005744339 fastq.gz 5.6 GB
EGAF00005744340 fastq.gz 5.7 GB
EGAF00005744341 fastq.gz 2.1 GB
EGAF00005744342 fastq.gz 2.2 GB
EGAF00005744343 fastq.gz 2.6 GB
EGAF00005744344 fastq.gz 2.8 GB
EGAF00005744345 fastq.gz 5.7 GB
EGAF00005744346 fastq.gz 5.7 GB
EGAF00005744347 fastq.gz 5.9 GB
EGAF00005744348 fastq.gz 5.9 GB
EGAF00005744349 fastq.gz 5.3 GB
EGAF00005744350 fastq.gz 5.3 GB
EGAF00005744351 fastq.gz 3.0 GB
EGAF00005744352 fastq.gz 3.1 GB
EGAF00005744353 fastq.gz 5.0 GB
EGAF00005744354 fastq.gz 5.1 GB
EGAF00005744355 fastq.gz 3.1 GB
EGAF00005744356 fastq.gz 3.2 GB
EGAF00005744357 fastq.gz 2.6 GB
EGAF00005744358 fastq.gz 2.7 GB
EGAF00005744359 fastq.gz 5.1 GB
EGAF00005744360 fastq.gz 5.2 GB
EGAF00005744361 fastq.gz 5.5 GB
EGAF00005744362 fastq.gz 5.6 GB
EGAF00005744363 fastq.gz 5.5 GB
EGAF00005744364 fastq.gz 5.5 GB
EGAF00005744365 fastq.gz 5.7 GB
EGAF00005744366 fastq.gz 5.9 GB
EGAF00005744367 fastq.gz 5.6 GB
EGAF00005744368 fastq.gz 5.6 GB
EGAF00005744369 fastq.gz 2.2 GB
EGAF00005744370 fastq.gz 2.3 GB
EGAF00005744371 fq.gz 2.2 GB
EGAF00005744372 fq.gz 2.2 GB
EGAF00005744373 fastq.gz 5.2 GB
EGAF00005744374 fastq.gz 5.2 GB
EGAF00005744375 fastq.gz 5.8 GB
EGAF00005744376 fastq.gz 5.9 GB
EGAF00005744377 fastq.gz 5.2 GB
EGAF00005744378 fastq.gz 5.2 GB
EGAF00005744379 fastq.gz 2.1 GB
EGAF00005744380 fastq.gz 2.1 GB
EGAF00005744381 fq.gz 11.2 GB
EGAF00005744382 fq.gz 11.5 GB
EGAF00005744383 fq.gz 9.6 GB
EGAF00005744384 fq.gz 10.0 GB
EGAF00005744385 fq.gz 2.3 GB
EGAF00005744386 fq.gz 2.4 GB
EGAF00005744387 fastq.gz 5.4 GB
EGAF00005744388 fastq.gz 5.4 GB
EGAF00005744389 fastq.gz 5.3 GB
EGAF00005744390 fastq.gz 5.4 GB
EGAF00005744391 fastq.gz 2.2 GB
EGAF00005744392 fastq.gz 2.3 GB
EGAF00005744393 fastq.gz 2.5 GB
EGAF00005744394 fastq.gz 2.6 GB
EGAF00005744395 fastq.gz 2.4 GB
EGAF00005744396 fastq.gz 2.4 GB
EGAF00005744397 fastq.gz 2.5 GB
EGAF00005744398 fastq.gz 2.6 GB
EGAF00005744399 fq.gz 6.7 GB
EGAF00005744400 fq.gz 6.9 GB
EGAF00005744401 fastq.gz 5.6 GB
EGAF00005744402 fastq.gz 5.6 GB
EGAF00005744403 fastq.gz 5.7 GB
EGAF00005744404 fastq.gz 5.7 GB
EGAF00005744405 fastq.gz 3.1 GB
EGAF00005744406 fastq.gz 3.3 GB
EGAF00005744407 fq.gz 6.9 GB
EGAF00005744408 fq.gz 7.1 GB
EGAF00005744409 fq.gz 6.8 GB
EGAF00005744410 fq.gz 7.0 GB
EGAF00005744411 fastq.gz 2.2 GB
EGAF00005744412 fastq.gz 2.2 GB
EGAF00005744413 fq.gz 9.2 GB
EGAF00005744414 fq.gz 9.9 GB
EGAF00005744415 fastq.gz 5.6 GB
EGAF00005744416 fastq.gz 5.6 GB
EGAF00005744417 fastq.gz 2.2 GB
EGAF00005744418 fastq.gz 2.3 GB
EGAF00005744419 fastq.gz 5.7 GB
EGAF00005744420 fastq.gz 5.7 GB
EGAF00005744421 fastq.gz 2.3 GB
EGAF00005744422 fastq.gz 2.4 GB
EGAF00005744423 fastq.gz 2.2 GB
EGAF00005744424 fastq.gz 2.3 GB
EGAF00005744425 fastq.gz 2.4 GB
EGAF00005744426 fastq.gz 2.4 GB
EGAF00005744427 fq.gz 8.5 GB
EGAF00005744428 fq.gz 8.8 GB
EGAF00005744429 fq.gz 9.2 GB
EGAF00005744430 fq.gz 9.6 GB
EGAF00005744431 fastq.gz 5.5 GB
EGAF00005744432 fastq.gz 5.5 GB
EGAF00005744433 fastq.gz 5.6 GB
EGAF00005744434 fastq.gz 5.7 GB
EGAF00005744435 fastq.gz 2.5 GB
EGAF00005744436 fastq.gz 2.6 GB
EGAF00005744437 fastq.gz 5.6 GB
EGAF00005744438 fastq.gz 5.5 GB
EGAF00005744439 fastq.gz 2.4 GB
EGAF00005744440 fastq.gz 2.6 GB
322 Files (1.5 TB)