About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Second primary vs. primary bowel malignancies

Data about copy number aberrations was obtained from primary CRC (n=90). DNA was collected from second primary CRC (in HL survivors, n = 39), and primary SBA (n=14). For second primary SBA (in HL and TC survivors), DNA was isolated for molecular analyses (n=7). Copy number aberrations were evaluated after low-coverage whole genome sequencing.

Request Access

Data Access Policy of NKI-AvL TGO

Data Access Policy of NKI-AvL TGO To request access to this specific dataset, and in order to comply with local and (inter)national regulations, please follow the steps described below: 1. Please fill in the information requested on the website: ega.nki.nl 2. Once you’ve submitted this information, the Data Access Committee (DAC) and the NKI-AVL Internal Review Board (IRB) will review your planned study and its goals and judge whether it is competing with our interests. The DAC and IRB can approve or decline your request or request a modification. 3. Upon approval by the IRB, you will receive a Data Transfer Agreement (DTA) that needs to be filled in and signed by the legal representative of your institute / company. 4. Upon acceptance of a signed DTA by our Knowledge Transfer & Contracting Office (KT&C), your party will receive a copy signed by our legal representative, and you will need to submit your access request via the EGA website

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005940 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005774356 fastq.gz 634.2 MB Report
EGAF00005774357 fastq.gz 453.4 MB Report
EGAF00005774358 fastq.gz 177.8 MB Report
EGAF00005774359 fastq.gz 177.3 MB Report
EGAF00005774360 fastq.gz 211.7 MB Report
EGAF00005774361 fastq.gz 210.6 MB Report
EGAF00005774362 fastq.gz 188.9 MB Report
EGAF00005774363 fastq.gz 188.1 MB Report
EGAF00005774364 fastq.gz 127.9 MB Report
EGAF00005774365 fastq.gz 127.5 MB Report
EGAF00005774366 fastq.gz 209.6 MB Report
EGAF00005774367 fastq.gz 209.2 MB Report
EGAF00005774368 fastq.gz 229.9 MB Report
EGAF00005774369 fastq.gz 229.0 MB Report
EGAF00005774370 fastq.gz 187.7 MB Report
EGAF00005774371 fastq.gz 186.9 MB Report
EGAF00005774372 fastq.gz 141.9 MB Report
EGAF00005774373 fastq.gz 141.3 MB Report
EGAF00005774374 fastq.gz 164.9 MB Report
EGAF00005774375 fastq.gz 164.4 MB Report
EGAF00005774376 fastq.gz 136.5 MB Report
EGAF00005774377 fastq.gz 136.0 MB Report
EGAF00005774378 fastq.gz 81.3 MB Report
EGAF00005774379 fastq.gz 141.0 MB Report
EGAF00005774380 fastq.gz 171.0 MB Report
EGAF00005774381 fastq.gz 170.5 MB Report
EGAF00005774382 fastq.gz 223.6 MB Report
EGAF00005774383 fastq.gz 222.6 MB Report
EGAF00005774384 fastq.gz 382.9 MB Report
EGAF00005774385 fastq.gz 380.6 MB Report
EGAF00005774386 fastq.gz 506.7 MB Report
EGAF00005774387 fastq.gz 257.8 MB Report
EGAF00005774388 fastq.gz 257.4 MB Report
EGAF00005774389 fastq.gz 214.4 MB Report
EGAF00005774390 fastq.gz 213.7 MB Report
EGAF00005774391 fastq.gz 124.0 MB Report
EGAF00005774392 fastq.gz 123.5 MB Report
EGAF00005774393 fastq.gz 107.8 MB Report
EGAF00005774394 fastq.gz 107.3 MB Report
EGAF00005774395 fastq.gz 229.6 MB Report
EGAF00005774396 fastq.gz 229.0 MB Report
EGAF00005774397 fastq.gz 237.0 MB Report
EGAF00005774398 fastq.gz 236.1 MB Report
EGAF00005774399 fastq.gz 232.5 MB Report
EGAF00005774400 fastq.gz 231.5 MB Report
EGAF00005774401 fastq.gz 202.6 MB Report
EGAF00005774402 fastq.gz 201.9 MB Report
EGAF00005774403 fastq.gz 261.5 MB Report
EGAF00005774404 fastq.gz 260.8 MB Report
EGAF00005774405 fastq.gz 204.3 MB Report
EGAF00005774406 fastq.gz 203.4 MB Report
EGAF00005774407 fastq.gz 216.0 MB Report
EGAF00005774408 fastq.gz 215.0 MB Report
EGAF00005774409 fastq.gz 253.2 MB Report
EGAF00005774410 fastq.gz 252.3 MB Report
EGAF00005774411 fastq.gz 215.0 MB Report
EGAF00005774412 fastq.gz 214.1 MB Report
EGAF00005774413 fastq.gz 196.5 MB Report
EGAF00005774414 fastq.gz 196.1 MB Report
EGAF00005774415 fastq.gz 153.2 MB Report
EGAF00005774416 fastq.gz 152.4 MB Report
EGAF00005774417 fastq.gz 236.6 MB Report
EGAF00005774418 fastq.gz 236.1 MB Report
EGAF00005774419 fastq.gz 157.5 MB Report
EGAF00005774420 fastq.gz 156.7 MB Report
EGAF00005774421 fastq.gz 236.1 MB Report
EGAF00005774422 fastq.gz 235.8 MB Report
EGAF00005774423 fastq.gz 172.9 MB Report
EGAF00005774424 fastq.gz 172.2 MB Report
EGAF00005774425 fastq.gz 35.5 MB Report
EGAF00005774426 fastq.gz 104.1 MB Report
EGAF00005774427 fastq.gz 109.9 MB Report
EGAF00005774428 fastq.gz 161.0 MB Report
EGAF00005774429 fastq.gz 247.0 MB Report
EGAF00005774430 fastq.gz 245.5 MB Report
EGAF00005774431 fastq.gz 218.7 MB Report
EGAF00005774432 fastq.gz 217.6 MB Report
EGAF00005774433 fastq.gz 948.3 MB Report
EGAF00005774434 fastq.gz 342.9 MB Report
EGAF00005774435 fastq.gz 129.7 MB Report
EGAF00005774436 fastq.gz 129.3 MB Report
EGAF00005774437 fastq.gz 371.0 MB Report
EGAF00005774438 fastq.gz 175.8 MB Report
EGAF00005774439 fastq.gz 175.1 MB Report
EGAF00005774440 fastq.gz 279.9 MB Report
EGAF00005774441 fastq.gz 279.2 MB Report
EGAF00005774442 fastq.gz 292.5 MB Report
EGAF00005774443 fastq.gz 290.6 MB Report
EGAF00005774444 fastq.gz 191.5 MB Report
EGAF00005774445 fastq.gz 190.8 MB Report
EGAF00005774446 fastq.gz 192.0 MB Report
EGAF00005774447 fastq.gz 191.3 MB Report
EGAF00005774448 fastq.gz 153.3 MB Report
EGAF00005774449 fastq.gz 152.6 MB Report
EGAF00005774450 fastq.gz 214.6 MB Report
EGAF00005774451 fastq.gz 214.2 MB Report
EGAF00005774452 fastq.gz 336.1 MB Report
EGAF00005774453 fastq.gz 334.5 MB Report
EGAF00005774454 fastq.gz 163.5 MB Report
EGAF00005774455 fastq.gz 163.0 MB Report
EGAF00005774456 fastq.gz 165.3 MB Report
EGAF00005774457 fastq.gz 164.7 MB Report
EGAF00005774458 fastq.gz 301.0 MB Report
EGAF00005774459 fastq.gz 166.3 MB Report
EGAF00005774460 fastq.gz 177.7 MB Report
EGAF00005774461 fastq.gz 176.7 MB Report
EGAF00005774462 fastq.gz 225.6 MB Report
EGAF00005774463 fastq.gz 225.0 MB Report
EGAF00005774464 fastq.gz 199.9 MB Report
EGAF00005774465 fastq.gz 198.9 MB Report
EGAF00005774466 fastq.gz 239.5 MB Report
EGAF00005774467 fastq.gz 238.8 MB Report
EGAF00005774468 fastq.gz 232.3 MB Report
EGAF00005774469 fastq.gz 231.2 MB Report
114 Files (24.9 GB)