About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WGS data subfolder HF3FKCCXY from multifocal ileal NETs study

This dataset includes linked-read whole-genome sequencing data (subfolder HF3FKCCXY) for multifocal ileal tumor samples from one patient. Samples were sequenced using the 10x Genomics linked-read whole-genome sequencing (WGS) approach.

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Data Access Agreement for WGS data subfolder HF3FKCCXY generated in Multifocal ileal NETs study

DATA ACCESS AGREEMENT This agreement governs the terms on which access will be granted to the genotype data generated by the current study. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data from the 1958 British Birth Cohort or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevent access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Consortium and the relevant primary collectors and their funders. Suitable wording is provided in the Publications Policy given in Schedule 1. 9. You accept that the Consortium, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 10. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 11. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 12. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 13. You accept that it may be necessary for the Consortium or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Consortium or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 14. You agree that you will submit a report to the Consortium Data Access Committee, if requested, on completion of the agreed purpose. The Consortium Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 15. You accept that the Data is protected by and subject to international laws, including but not limited to the UK Data Protection Act 1998, and that You are responsible for ensuring compliance with any such applicable law. The Consortium Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA. 16. This agreement shall be construed, interpreted and governed by the laws of England and Wales and shall be subject to the non-exclusive jurisdiction of the English courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005622 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005485953 fastq.gz 142.9 MB Report
EGAF00005485954 fastq.gz 157.3 MB Report
EGAF00005485955 fastq.gz 1.6 GB Report
EGAF00005485956 fastq.gz 1.8 GB Report
EGAF00005485957 fastq.gz 122.1 MB Report
EGAF00005485958 fastq.gz 121.9 MB Report
EGAF00005485959 fastq.gz 1.6 GB Report
EGAF00005485960 fastq.gz 1.8 GB Report
EGAF00005485961 fastq.gz 138.2 MB Report
EGAF00005485962 fastq.gz 121.6 MB Report
EGAF00005485963 fastq.gz 121.7 MB Report
EGAF00005485964 fastq.gz 1.9 GB Report
EGAF00005485965 fastq.gz 2.1 GB Report
EGAF00005485966 fastq.gz 139.5 MB Report
EGAF00005485967 fastq.gz 1.7 GB Report
EGAF00005485968 fastq.gz 1.9 GB Report
EGAF00005485969 fastq.gz 1.8 GB Report
EGAF00005485970 fastq.gz 2.0 GB Report
EGAF00005485971 fastq.gz 1.7 GB Report
EGAF00005485972 fastq.gz 1.9 GB Report
EGAF00005485973 fastq.gz 1.5 GB Report
EGAF00005485974 fastq.gz 1.7 GB Report
EGAF00005485975 fastq.gz 2.0 GB Report
EGAF00005485976 fastq.gz 2.2 GB Report
EGAF00005485977 fastq.gz 1.8 GB Report
EGAF00005485978 fastq.gz 2.0 GB Report
EGAF00005485979 fastq.gz 139.0 MB Report
EGAF00005485980 fastq.gz 137.9 MB Report
EGAF00005485981 fastq.gz 139.0 MB Report
EGAF00005485982 fastq.gz 1.6 GB Report
EGAF00005485983 fastq.gz 1.8 GB Report
EGAF00005485984 fastq.gz 154.6 MB Report
EGAF00005485985 fastq.gz 142.1 MB Report
EGAF00005485986 fastq.gz 136.1 MB Report
EGAF00005485987 fastq.gz 1.8 GB Report
EGAF00005485988 fastq.gz 2.0 GB Report
EGAF00005485989 fastq.gz 1.8 GB Report
EGAF00005485990 fastq.gz 2.0 GB Report
EGAF00005485991 fastq.gz 1.8 GB Report
EGAF00005485992 fastq.gz 2.0 GB Report
EGAF00005485993 fastq.gz 1.8 GB Report
EGAF00005485994 fastq.gz 2.0 GB Report
EGAF00005485995 fastq.gz 2.1 GB Report
EGAF00005485996 fastq.gz 2.3 GB Report
EGAF00005485997 fastq.gz 1.9 GB Report
EGAF00005485998 fastq.gz 2.1 GB Report
EGAF00005485999 fastq.gz 2.0 GB Report
EGAF00005486000 fastq.gz 2.3 GB Report
EGAF00005486001 fastq.gz 1.7 GB Report
EGAF00005486002 fastq.gz 1.9 GB Report
EGAF00005486003 fastq.gz 2.0 GB Report
EGAF00005486004 fastq.gz 2.3 GB Report
EGAF00005486005 fastq.gz 1.7 GB Report
EGAF00005486006 fastq.gz 1.9 GB Report
EGAF00005486007 fastq.gz 136.3 MB Report
EGAF00005486008 fastq.gz 1.9 GB Report
EGAF00005486009 fastq.gz 2.1 GB Report
EGAF00005486010 fastq.gz 1.8 GB Report
EGAF00005486011 fastq.gz 2.0 GB Report
EGAF00005486012 fastq.gz 1.7 GB Report
EGAF00005486013 fastq.gz 1.9 GB Report
EGAF00005486014 fastq.gz 127.2 MB Report
EGAF00005486015 fastq.gz 138.0 MB Report
EGAF00005486016 fastq.gz 138.6 MB Report
EGAF00005486017 fastq.gz 138.1 MB Report
EGAF00005486018 fastq.gz 156.3 MB Report
EGAF00005486019 fastq.gz 2.0 GB Report
EGAF00005486020 fastq.gz 2.2 GB Report
EGAF00005486021 fastq.gz 126.8 MB Report
EGAF00005486022 fastq.gz 1.6 GB Report
EGAF00005486023 fastq.gz 1.8 GB Report
EGAF00005486024 fastq.gz 146.7 MB Report
EGAF00005486025 fastq.gz 146.5 MB Report
EGAF00005486026 fastq.gz 154.8 MB Report
EGAF00005486027 fastq.gz 1.8 GB Report
EGAF00005486028 fastq.gz 2.0 GB Report
EGAF00005486029 fastq.gz 1.8 GB Report
EGAF00005486030 fastq.gz 2.0 GB Report
EGAF00005486031 fastq.gz 2.1 GB Report
EGAF00005486032 fastq.gz 2.3 GB Report
EGAF00005486033 fastq.gz 154.3 MB Report
EGAF00005486034 fastq.gz 1.8 GB Report
EGAF00005486035 fastq.gz 2.0 GB Report
EGAF00005486036 fastq.gz 147.5 MB Report
EGAF00005486037 fastq.gz 2.0 GB Report
EGAF00005486038 fastq.gz 2.2 GB Report
EGAF00005486039 fastq.gz 1.7 GB Report
EGAF00005486040 fastq.gz 1.9 GB Report
EGAF00005486041 fastq.gz 1.9 GB Report
EGAF00005486042 fastq.gz 2.1 GB Report
EGAF00005486043 fastq.gz 139.6 MB Report
EGAF00005486044 fastq.gz 1.5 GB Report
EGAF00005486045 fastq.gz 1.7 GB Report
EGAF00005486046 fastq.gz 161.1 MB Report
EGAF00005486047 fastq.gz 143.0 MB Report
EGAF00005486048 fastq.gz 1.6 GB Report
EGAF00005486049 fastq.gz 1.8 GB Report
EGAF00005486050 fastq.gz 161.3 MB Report
EGAF00005486051 fastq.gz 142.6 MB Report
EGAF00005486052 fastq.gz 1.5 GB Report
EGAF00005486053 fastq.gz 1.7 GB Report
EGAF00005486054 fastq.gz 136.4 MB Report
EGAF00005486055 fastq.gz 1.8 GB Report
EGAF00005486056 fastq.gz 2.0 GB Report
EGAF00005486057 fastq.gz 164.4 MB Report
EGAF00005486058 fastq.gz 126.7 MB Report
EGAF00005486059 fastq.gz 147.0 MB Report
EGAF00005486060 fastq.gz 1.6 GB Report
EGAF00005486061 fastq.gz 1.8 GB Report
EGAF00005486062 fastq.gz 1.8 GB Report
EGAF00005486063 fastq.gz 2.0 GB Report
EGAF00005486064 fastq.gz 165.1 MB Report
EGAF00005486065 fastq.gz 156.6 MB Report
EGAF00005486066 fastq.gz 136.1 MB Report
EGAF00005486067 fastq.gz 154.9 MB Report
EGAF00005486068 fastq.gz 161.0 MB Report
EGAF00005486069 fastq.gz 127.2 MB Report
EGAF00005486070 fastq.gz 2.0 GB Report
EGAF00005486071 fastq.gz 2.2 GB Report
EGAF00005486072 fastq.gz 1.9 GB Report
EGAF00005486073 fastq.gz 2.1 GB Report
EGAF00005486074 fastq.gz 142.7 MB Report
EGAF00005486075 fastq.gz 1.9 GB Report
EGAF00005486076 fastq.gz 2.1 GB Report
EGAF00005486077 fastq.gz 1.8 GB Report
EGAF00005486078 fastq.gz 2.1 GB Report
EGAF00005486079 fastq.gz 1.5 GB Report
EGAF00005486080 fastq.gz 1.7 GB Report
EGAF00005486081 fastq.gz 1.5 GB Report
EGAF00005486082 fastq.gz 1.7 GB Report
EGAF00005486083 fastq.gz 161.3 MB Report
EGAF00005486084 fastq.gz 147.2 MB Report
EGAF00005486085 fastq.gz 1.8 GB Report
EGAF00005486086 fastq.gz 2.1 GB Report
EGAF00005486087 fastq.gz 147.3 MB Report
EGAF00005486088 fastq.gz 138.5 MB Report
EGAF00005486089 fastq.gz 137.0 MB Report
EGAF00005486090 fastq.gz 1.7 GB Report
EGAF00005486091 fastq.gz 1.9 GB Report
EGAF00005486092 fastq.gz 2.0 GB Report
EGAF00005486093 fastq.gz 2.3 GB Report
EGAF00005486094 fastq.gz 164.8 MB Report
EGAF00005486095 fastq.gz 1.6 GB Report
EGAF00005486096 fastq.gz 1.8 GB Report
EGAF00005486097 fastq.gz 157.4 MB Report
EGAF00005486098 fastq.gz 164.3 MB Report
EGAF00005486099 fastq.gz 127.1 MB Report
EGAF00005486100 fastq.gz 1.8 GB Report
EGAF00005486101 fastq.gz 2.0 GB Report
EGAF00005486102 fastq.gz 1.8 GB Report
EGAF00005486103 fastq.gz 2.0 GB Report
EGAF00005486104 fastq.gz 142.5 MB Report
EGAF00005486105 fastq.gz 136.6 MB Report
EGAF00005486106 fastq.gz 139.4 MB Report
EGAF00005486107 fastq.gz 161.0 MB Report
EGAF00005486108 fastq.gz 142.5 MB Report
EGAF00005486109 fastq.gz 2.0 GB Report
EGAF00005486110 fastq.gz 2.3 GB Report
EGAF00005486111 fastq.gz 1.5 GB Report
EGAF00005486112 fastq.gz 1.7 GB Report
EGAF00005486113 fastq.gz 2.0 GB Report
EGAF00005486114 fastq.gz 2.3 GB Report
EGAF00005486115 fastq.gz 1.7 GB Report
EGAF00005486116 fastq.gz 1.9 GB Report
EGAF00005486117 fastq.gz 121.7 MB Report
EGAF00005486118 fastq.gz 1.8 GB Report
EGAF00005486119 fastq.gz 2.0 GB Report
EGAF00005486120 fastq.gz 139.1 MB Report
EGAF00005486121 fastq.gz 1.8 GB Report
EGAF00005486122 fastq.gz 2.0 GB Report
EGAF00005486123 fastq.gz 138.6 MB Report
EGAF00005486124 fastq.gz 1.7 GB Report
EGAF00005486125 fastq.gz 1.9 GB Report
EGAF00005486126 fastq.gz 138.9 MB Report
EGAF00005486127 fastq.gz 156.7 MB Report
EGAF00005486128 fastq.gz 1.9 GB Report
EGAF00005486129 fastq.gz 2.1 GB Report
EGAF00005486130 fastq.gz 1.9 GB Report
EGAF00005486131 fastq.gz 2.1 GB Report
EGAF00005486132 fastq.gz 122.1 MB Report
EGAF00005486133 fastq.gz 1.7 GB Report
EGAF00005486134 fastq.gz 1.9 GB Report
EGAF00005486135 fastq.gz 121.4 MB Report
EGAF00005486136 fastq.gz 1.8 GB Report
EGAF00005486137 fastq.gz 2.0 GB Report
EGAF00005486138 fastq.gz 2.1 GB Report
EGAF00005486139 fastq.gz 2.3 GB Report
EGAF00005486140 fastq.gz 1.7 GB Report
EGAF00005486141 fastq.gz 1.9 GB Report
EGAF00005486142 fastq.gz 1.9 GB Report
EGAF00005486143 fastq.gz 2.1 GB Report
EGAF00005486144 fastq.gz 1.7 GB Report
EGAF00005486145 fastq.gz 1.9 GB Report
EGAF00005486146 fastq.gz 160.6 MB Report
EGAF00005486147 fastq.gz 1.7 GB Report
EGAF00005486148 fastq.gz 1.9 GB Report
EGAF00005486149 fastq.gz 153.8 MB Report
EGAF00005486150 fastq.gz 153.7 MB Report
EGAF00005486151 fastq.gz 164.4 MB Report
EGAF00005486152 fastq.gz 154.1 MB Report
EGAF00005486153 fastq.gz 1.5 GB Report
EGAF00005486154 fastq.gz 1.7 GB Report
EGAF00005486155 fastq.gz 1.9 GB Report
EGAF00005486156 fastq.gz 2.1 GB Report
EGAF00005486157 fastq.gz 1.8 GB Report
EGAF00005486158 fastq.gz 2.0 GB Report
EGAF00005486159 fastq.gz 164.9 MB Report
EGAF00005486160 fastq.gz 157.0 MB Report
EGAF00005486161 fastq.gz 147.3 MB Report
EGAF00005486162 fastq.gz 164.7 MB Report
EGAF00005486163 fastq.gz 122.2 MB Report
EGAF00005486164 fastq.gz 165.1 MB Report
EGAF00005486165 fastq.gz 1.7 GB Report
EGAF00005486166 fastq.gz 1.9 GB Report
EGAF00005486167 fastq.gz 161.3 MB Report
EGAF00005486168 fastq.gz 1.7 GB Report
EGAF00005486169 fastq.gz 1.9 GB Report
EGAF00005486170 fastq.gz 1.8 GB Report
EGAF00005486171 fastq.gz 2.1 GB Report
EGAF00005486172 fastq.gz 127.4 MB Report
EGAF00005486173 fastq.gz 160.9 MB Report
EGAF00005486174 fastq.gz 1.8 GB Report
EGAF00005486175 fastq.gz 2.0 GB Report
EGAF00005486176 fastq.gz 127.5 MB Report
EGAF00005486177 fastq.gz 1.7 GB Report
EGAF00005486178 fastq.gz 1.9 GB Report
EGAF00005486179 fastq.gz 2.1 GB Report
EGAF00005486180 fastq.gz 2.3 GB Report
EGAF00005486181 fastq.gz 1.8 GB Report
EGAF00005486182 fastq.gz 2.0 GB Report
EGAF00005486183 fastq.gz 139.1 MB Report
EGAF00005486184 fastq.gz 2.0 GB Report
EGAF00005486185 fastq.gz 2.2 GB Report
EGAF00005486186 fastq.gz 1.8 GB Report
EGAF00005486187 fastq.gz 2.0 GB Report
EGAF00005486188 fastq.gz 138.6 MB Report
EGAF00005486189 fastq.gz 2.0 GB Report
EGAF00005486190 fastq.gz 2.3 GB Report
EGAF00005486191 fastq.gz 156.9 MB Report
EGAF00005486192 fastq.gz 1.5 GB Report
EGAF00005486193 fastq.gz 1.7 GB Report
EGAF00005486194 fastq.gz 156.9 MB Report
EGAF00005486195 fastq.gz 1.6 GB Report
EGAF00005486196 fastq.gz 1.8 GB Report
EGAF00005486197 fastq.gz 1.8 GB Report
EGAF00005486198 fastq.gz 2.0 GB Report
EGAF00005486199 fastq.gz 142.8 MB Report
EGAF00005486200 fastq.gz 1.9 GB Report
EGAF00005486201 fastq.gz 2.1 GB Report
EGAF00005486202 fastq.gz 155.2 MB Report
EGAF00005486203 fastq.gz 146.6 MB Report
EGAF00005486204 fastq.gz 1.8 GB Report
EGAF00005486205 fastq.gz 2.0 GB Report
EGAF00005486206 fastq.gz 127.0 MB Report
EGAF00005486207 fastq.gz 136.8 MB Report
EGAF00005486208 fastq.gz 2.0 GB Report
EGAF00005486209 fastq.gz 2.2 GB Report
EGAF00005486210 fastq.gz 1.9 GB Report
EGAF00005486211 fastq.gz 2.1 GB Report
EGAF00005486212 fastq.gz 1.8 GB Report
EGAF00005486213 fastq.gz 2.0 GB Report
EGAF00005486214 fastq.gz 1.9 GB Report
EGAF00005486215 fastq.gz 2.1 GB Report
EGAF00005486216 fastq.gz 137.1 MB Report
264 Files (345.8 GB)