About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WGS data subfolder HFFWLCCXY from multifocal ileal NETs study

This dataset includes linked-read whole-genome sequencing data (subfolder HFFWLCCXY) for multifocal ileal tumor samples from one patient. Samples were sequenced using the 10x Genomics linked-read whole-genome sequencing (WGS) approach.

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Data Access Agreement for WGS data subfolder HFFWLCCXY generated in Multifocal ileal NETs study

DATA ACCESS AGREEMENT This agreement governs the terms on which access will be granted to the genotype data generated by the current study. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data from the 1958 British Birth Cohort or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevent access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Consortium and the relevant primary collectors and their funders. Suitable wording is provided in the Publications Policy given in Schedule 1. 9. You accept that the Consortium, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 10. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 11. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 12. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 13. You accept that it may be necessary for the Consortium or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Consortium or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 14. You agree that you will submit a report to the Consortium Data Access Committee, if requested, on completion of the agreed purpose. The Consortium Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 15. You accept that the Data is protected by and subject to international laws, including but not limited to the UK Data Protection Act 1998, and that You are responsible for ensuring compliance with any such applicable law. The Consortium Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA. 16. This agreement shall be construed, interpreted and governed by the laws of England and Wales and shall be subject to the non-exclusive jurisdiction of the English courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005625 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005486745 fastq.gz 1.6 GB Report
EGAF00005486746 fastq.gz 1.8 GB Report
EGAF00005486747 fastq.gz 135.6 MB Report
EGAF00005486748 fastq.gz 1.6 GB Report
EGAF00005486749 fastq.gz 1.8 GB Report
EGAF00005486750 fastq.gz 1.5 GB Report
EGAF00005486751 fastq.gz 1.7 GB Report
EGAF00005486752 fastq.gz 1.6 GB Report
EGAF00005486753 fastq.gz 1.8 GB Report
EGAF00005486754 fastq.gz 1.5 GB Report
EGAF00005486755 fastq.gz 1.7 GB Report
EGAF00005486756 fastq.gz 1.4 GB Report
EGAF00005486757 fastq.gz 1.6 GB Report
EGAF00005486758 fastq.gz 1.7 GB Report
EGAF00005486759 fastq.gz 1.9 GB Report
EGAF00005486760 fastq.gz 163.3 MB Report
EGAF00005486761 fastq.gz 153.1 MB Report
EGAF00005486762 fastq.gz 152.7 MB Report
EGAF00005486763 fastq.gz 1.9 GB Report
EGAF00005486764 fastq.gz 2.1 GB Report
EGAF00005486765 fastq.gz 1.6 GB Report
EGAF00005486766 fastq.gz 1.8 GB Report
EGAF00005486767 fastq.gz 161.7 MB Report
EGAF00005486768 fastq.gz 2.0 GB Report
EGAF00005486769 fastq.gz 2.2 GB Report
EGAF00005486770 fastq.gz 1.8 GB Report
EGAF00005486771 fastq.gz 2.0 GB Report
EGAF00005486772 fastq.gz 152.3 MB Report
EGAF00005486773 fastq.gz 136.8 MB Report
EGAF00005486774 fastq.gz 136.3 MB Report
EGAF00005486775 fastq.gz 164.0 MB Report
EGAF00005486776 fastq.gz 159.4 MB Report
EGAF00005486777 fastq.gz 164.5 MB Report
EGAF00005486778 fastq.gz 144.4 MB Report
EGAF00005486779 fastq.gz 135.0 MB Report
EGAF00005486780 fastq.gz 1.5 GB Report
EGAF00005486781 fastq.gz 1.6 GB Report
EGAF00005486782 fastq.gz 132.7 MB Report
EGAF00005486783 fastq.gz 136.4 MB Report
EGAF00005486784 fastq.gz 2.0 GB Report
EGAF00005486785 fastq.gz 2.2 GB Report
EGAF00005486786 fastq.gz 1.6 GB Report
EGAF00005486787 fastq.gz 1.8 GB Report
EGAF00005486788 fastq.gz 1.7 GB Report
EGAF00005486789 fastq.gz 1.9 GB Report
EGAF00005486790 fastq.gz 140.0 MB Report
EGAF00005486791 fastq.gz 1.4 GB Report
EGAF00005486792 fastq.gz 1.6 GB Report
EGAF00005486793 fastq.gz 139.4 MB Report
EGAF00005486794 fastq.gz 1.8 GB Report
EGAF00005486795 fastq.gz 2.0 GB Report
EGAF00005486796 fastq.gz 1.5 GB Report
EGAF00005486797 fastq.gz 1.7 GB Report
EGAF00005486798 fastq.gz 1.8 GB Report
EGAF00005486799 fastq.gz 2.0 GB Report
EGAF00005486800 fastq.gz 1.7 GB Report
EGAF00005486801 fastq.gz 1.9 GB Report
EGAF00005486802 fastq.gz 1.9 GB Report
EGAF00005486803 fastq.gz 2.2 GB Report
EGAF00005486804 fastq.gz 1.6 GB Report
EGAF00005486805 fastq.gz 1.8 GB Report
EGAF00005486806 fastq.gz 1.9 GB Report
EGAF00005486807 fastq.gz 2.1 GB Report
EGAF00005486808 fastq.gz 1.7 GB Report
EGAF00005486809 fastq.gz 1.9 GB Report
EGAF00005486810 fastq.gz 1.9 GB Report
EGAF00005486811 fastq.gz 2.1 GB Report
EGAF00005486812 fastq.gz 1.9 GB Report
EGAF00005486813 fastq.gz 2.1 GB Report
EGAF00005486814 fastq.gz 152.2 MB Report
EGAF00005486815 fastq.gz 119.1 MB Report
EGAF00005486816 fastq.gz 135.0 MB Report
EGAF00005486817 fastq.gz 134.2 MB Report
EGAF00005486818 fastq.gz 1.7 GB Report
EGAF00005486819 fastq.gz 1.9 GB Report
EGAF00005486820 fastq.gz 161.5 MB Report
EGAF00005486821 fastq.gz 136.7 MB Report
EGAF00005486822 fastq.gz 126.4 MB Report
EGAF00005486823 fastq.gz 1.7 GB Report
EGAF00005486824 fastq.gz 1.9 GB Report
EGAF00005486825 fastq.gz 136.3 MB Report
EGAF00005486826 fastq.gz 1.6 GB Report
EGAF00005486827 fastq.gz 1.8 GB Report
EGAF00005486828 fastq.gz 126.7 MB Report
EGAF00005486829 fastq.gz 1.6 GB Report
EGAF00005486830 fastq.gz 1.8 GB Report
EGAF00005486831 fastq.gz 1.4 GB Report
EGAF00005486832 fastq.gz 1.6 GB Report
EGAF00005486833 fastq.gz 143.8 MB Report
EGAF00005486834 fastq.gz 1.8 GB Report
EGAF00005486835 fastq.gz 2.0 GB Report
EGAF00005486836 fastq.gz 119.9 MB Report
EGAF00005486837 fastq.gz 119.5 MB Report
EGAF00005486838 fastq.gz 1.4 GB Report
EGAF00005486839 fastq.gz 1.6 GB Report
EGAF00005486840 fastq.gz 1.8 GB Report
EGAF00005486841 fastq.gz 2.0 GB Report
EGAF00005486842 fastq.gz 1.7 GB Report
EGAF00005486843 fastq.gz 1.9 GB Report
EGAF00005486844 fastq.gz 157.0 MB Report
EGAF00005486845 fastq.gz 1.7 GB Report
EGAF00005486846 fastq.gz 1.9 GB Report
EGAF00005486847 fastq.gz 132.5 MB Report
EGAF00005486848 fastq.gz 134.9 MB Report
EGAF00005486849 fastq.gz 1.7 GB Report
EGAF00005486850 fastq.gz 1.9 GB Report
EGAF00005486851 fastq.gz 140.5 MB Report
EGAF00005486852 fastq.gz 1.7 GB Report
EGAF00005486853 fastq.gz 1.9 GB Report
EGAF00005486854 fastq.gz 134.6 MB Report
EGAF00005486855 fastq.gz 136.7 MB Report
EGAF00005486856 fastq.gz 149.3 MB Report
EGAF00005486857 fastq.gz 157.6 MB Report
EGAF00005486858 fastq.gz 1.5 GB Report
EGAF00005486859 fastq.gz 1.7 GB Report
EGAF00005486860 fastq.gz 1.8 GB Report
EGAF00005486861 fastq.gz 2.0 GB Report
EGAF00005486862 fastq.gz 1.5 GB Report
EGAF00005486863 fastq.gz 1.7 GB Report
EGAF00005486864 fastq.gz 145.3 MB Report
EGAF00005486865 fastq.gz 1.5 GB Report
EGAF00005486866 fastq.gz 1.7 GB Report
EGAF00005486867 fastq.gz 144.9 MB Report
EGAF00005486868 fastq.gz 1.8 GB Report
EGAF00005486869 fastq.gz 2.0 GB Report
EGAF00005486870 fastq.gz 145.2 MB Report
EGAF00005486871 fastq.gz 1.7 GB Report
EGAF00005486872 fastq.gz 1.9 GB Report
EGAF00005486873 fastq.gz 164.1 MB Report
EGAF00005486874 fastq.gz 164.4 MB Report
EGAF00005486875 fastq.gz 135.0 MB Report
EGAF00005486876 fastq.gz 1.6 GB Report
EGAF00005486877 fastq.gz 1.8 GB Report
EGAF00005486878 fastq.gz 1.6 GB Report
EGAF00005486879 fastq.gz 1.8 GB Report
EGAF00005486880 fastq.gz 1.5 GB Report
EGAF00005486881 fastq.gz 1.7 GB Report
EGAF00005486882 fastq.gz 118.7 MB Report
EGAF00005486883 fastq.gz 156.8 MB Report
EGAF00005486884 fastq.gz 1.4 GB Report
EGAF00005486885 fastq.gz 1.5 GB Report
EGAF00005486886 fastq.gz 1.4 GB Report
EGAF00005486887 fastq.gz 1.6 GB Report
EGAF00005486888 fastq.gz 1.7 GB Report
EGAF00005486889 fastq.gz 1.8 GB Report
EGAF00005486890 fastq.gz 1.6 GB Report
EGAF00005486891 fastq.gz 1.8 GB Report
EGAF00005486892 fastq.gz 1.7 GB Report
EGAF00005486893 fastq.gz 1.9 GB Report
EGAF00005486894 fastq.gz 157.0 MB Report
EGAF00005486895 fastq.gz 122.2 MB Report
EGAF00005486896 fastq.gz 157.4 MB Report
EGAF00005486897 fastq.gz 135.4 MB Report
EGAF00005486898 fastq.gz 140.2 MB Report
EGAF00005486899 fastq.gz 135.9 MB Report
EGAF00005486900 fastq.gz 1.4 GB Report
EGAF00005486901 fastq.gz 1.6 GB Report
EGAF00005486902 fastq.gz 136.1 MB Report
EGAF00005486903 fastq.gz 1.7 GB Report
EGAF00005486904 fastq.gz 1.9 GB Report
EGAF00005486905 fastq.gz 162.0 MB Report
EGAF00005486906 fastq.gz 162.2 MB Report
EGAF00005486907 fastq.gz 125.9 MB Report
EGAF00005486908 fastq.gz 1.6 GB Report
EGAF00005486909 fastq.gz 1.8 GB Report
EGAF00005486910 fastq.gz 154.9 MB Report
EGAF00005486911 fastq.gz 130.8 MB Report
EGAF00005486912 fastq.gz 154.3 MB Report
EGAF00005486913 fastq.gz 1.6 GB Report
EGAF00005486914 fastq.gz 1.8 GB Report
EGAF00005486915 fastq.gz 135.5 MB Report
EGAF00005486916 fastq.gz 1.6 GB Report
EGAF00005486917 fastq.gz 1.7 GB Report
EGAF00005486918 fastq.gz 125.4 MB Report
EGAF00005486919 fastq.gz 149.7 MB Report
EGAF00005486920 fastq.gz 162.8 MB Report
EGAF00005486921 fastq.gz 137.8 MB Report
EGAF00005486922 fastq.gz 1.9 GB Report
EGAF00005486923 fastq.gz 2.1 GB Report
EGAF00005486924 fastq.gz 1.7 GB Report
EGAF00005486925 fastq.gz 1.9 GB Report
EGAF00005486926 fastq.gz 137.2 MB Report
EGAF00005486927 fastq.gz 1.7 GB Report
EGAF00005486928 fastq.gz 1.9 GB Report
EGAF00005486929 fastq.gz 1.7 GB Report
EGAF00005486930 fastq.gz 1.9 GB Report
EGAF00005486931 fastq.gz 152.3 MB Report
EGAF00005486932 fastq.gz 137.3 MB Report
EGAF00005486933 fastq.gz 132.2 MB Report
EGAF00005486934 fastq.gz 2.0 GB Report
EGAF00005486935 fastq.gz 2.1 GB Report
EGAF00005486936 fastq.gz 1.8 GB Report
EGAF00005486937 fastq.gz 2.0 GB Report
EGAF00005486938 fastq.gz 1.8 GB Report
EGAF00005486939 fastq.gz 2.0 GB Report
EGAF00005486940 fastq.gz 140.1 MB Report
EGAF00005486941 fastq.gz 137.1 MB Report
EGAF00005486942 fastq.gz 156.9 MB Report
EGAF00005486943 fastq.gz 142.6 MB Report
EGAF00005486944 fastq.gz 2.0 GB Report
EGAF00005486945 fastq.gz 2.2 GB Report
EGAF00005486946 fastq.gz 153.3 MB Report
EGAF00005486947 fastq.gz 1.9 GB Report
EGAF00005486948 fastq.gz 2.2 GB Report
EGAF00005486949 fastq.gz 1.9 GB Report
EGAF00005486950 fastq.gz 2.1 GB Report
EGAF00005486951 fastq.gz 162.0 MB Report
EGAF00005486952 fastq.gz 156.4 MB Report
EGAF00005486953 fastq.gz 1.8 GB Report
EGAF00005486954 fastq.gz 2.0 GB Report
EGAF00005486955 fastq.gz 160.9 MB Report
EGAF00005486956 fastq.gz 160.7 MB Report
EGAF00005486957 fastq.gz 1.7 GB Report
EGAF00005486958 fastq.gz 1.9 GB Report
EGAF00005486959 fastq.gz 1.8 GB Report
EGAF00005486960 fastq.gz 2.0 GB Report
EGAF00005486961 fastq.gz 1.5 GB Report
EGAF00005486962 fastq.gz 1.7 GB Report
EGAF00005486963 fastq.gz 126.1 MB Report
EGAF00005486964 fastq.gz 1.8 GB Report
EGAF00005486965 fastq.gz 2.0 GB Report
EGAF00005486966 fastq.gz 1.7 GB Report
EGAF00005486967 fastq.gz 1.9 GB Report
EGAF00005486968 fastq.gz 159.0 MB Report
EGAF00005486969 fastq.gz 126.3 MB Report
EGAF00005486970 fastq.gz 2.0 GB Report
EGAF00005486971 fastq.gz 2.2 GB Report
EGAF00005486972 fastq.gz 1.6 GB Report
EGAF00005486973 fastq.gz 1.8 GB Report
EGAF00005486974 fastq.gz 1.6 GB Report
EGAF00005486975 fastq.gz 1.8 GB Report
EGAF00005486976 fastq.gz 140.5 MB Report
EGAF00005486977 fastq.gz 1.6 GB Report
EGAF00005486978 fastq.gz 1.8 GB Report
EGAF00005486979 fastq.gz 140.9 MB Report
EGAF00005486980 fastq.gz 1.9 GB Report
EGAF00005486981 fastq.gz 2.1 GB Report
EGAF00005486982 fastq.gz 115.9 MB Report
EGAF00005486983 fastq.gz 1.8 GB Report
EGAF00005486984 fastq.gz 2.0 GB Report
EGAF00005486985 fastq.gz 1.4 GB Report
EGAF00005486986 fastq.gz 1.6 GB Report
EGAF00005486987 fastq.gz 1.8 GB Report
EGAF00005486988 fastq.gz 2.0 GB Report
EGAF00005486989 fastq.gz 117.8 MB Report
EGAF00005486990 fastq.gz 1.7 GB Report
EGAF00005486991 fastq.gz 1.9 GB Report
EGAF00005486992 fastq.gz 124.5 MB Report
EGAF00005486993 fastq.gz 135.7 MB Report
EGAF00005486994 fastq.gz 1.7 GB Report
EGAF00005486995 fastq.gz 1.9 GB Report
EGAF00005486996 fastq.gz 1.6 GB Report
EGAF00005486997 fastq.gz 1.8 GB Report
EGAF00005486998 fastq.gz 1.7 GB Report
EGAF00005486999 fastq.gz 1.9 GB Report
EGAF00005487000 fastq.gz 1.6 GB Report
EGAF00005487001 fastq.gz 1.8 GB Report
EGAF00005487002 fastq.gz 119.5 MB Report
EGAF00005487003 fastq.gz 2.0 GB Report
EGAF00005487004 fastq.gz 2.2 GB Report
EGAF00005487005 fastq.gz 119.9 MB Report
EGAF00005487006 fastq.gz 144.6 MB Report
EGAF00005487007 fastq.gz 2.0 GB Report
EGAF00005487008 fastq.gz 2.2 GB Report
264 Files (327.1 GB)