IYDP Indonesian Y chromosome Diversity Project

Dataset ID Technology Samples
EGAD00001008573 HiSeq X Ten 126

Dataset Description

The IYDP dataset includes BAM files of 126 Y chromosomes extracted from whole genome sequences. These are from individuals from a broad range of Indonesian islands - communities close to mainland Asia through to New Guinea. The original whole genome sequencing libraries were prepared using TruSeq DNA PCR-Free and TruSeq Nano DNA HT kits depending on DNA quantity. 150 bp paired-end sequencing was performed on the Illumina HiSeq X sequencer. Individuals were sequenced to expected mean depth of 30x, with an achieved median depth of raw reads across samples of 43x.

Data Use Conditions


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Label Code Version Modifier
population origins or ancestry research only DUO:0000011 2021-02-23
obsolete research use only DUO:0000014 2021-02-23
data use modifier DUO:0000017 2021-02-23
not for profit, non commercial use only DUO:0000018 2021-02-23
publication required DUO:0000019 2021-02-23
collaboration required DUO:0000020 2021-02-23
ethics approval required DUO:0000021 2021-02-23
user specific restriction DUO:0000026 2021-02-23
project specific restriction DUO:0000027 2021-02-23