Dataset

IYDP Indonesian Y chromosome Diversity Project

Dataset ID Technology Samples
EGAD00001008573 HiSeq X Ten 126

Dataset Description

The IYDP dataset includes BAM files of 126 Y chromosomes extracted from whole genome sequences. These are from individuals from a broad range of Indonesian islands - communities close to mainland Asia through to New Guinea. The original whole genome sequencing libraries were prepared using TruSeq DNA PCR-Free and TruSeq Nano DNA HT kits depending on DNA quantity. 150 bp paired-end sequencing was performed on the Illumina HiSeq X sequencer. Individuals were sequenced to expected mean depth of 30x, with an achieved median depth of raw reads across samples of 43x.

Data Use Conditions

POA RUO NPU PUB COL IRB US PS

See further information on Data Use Conditions

Label Code Version Modifier
population origins or ancestry research only DUO:0000011 2021-02-23
obsolete research use only DUO:0000014 2021-02-23
data use modifier DUO:0000017 2021-02-23
not for profit, non commercial use only DUO:0000018 2021-02-23
publication required DUO:0000019 2021-02-23
collaboration required DUO:0000020 2021-02-23
ethics approval required DUO:0000021 2021-02-23
user specific restriction DUO:0000026 2021-02-23
project specific restriction DUO:0000027 2021-02-23