| Dataset ID | Technology | Samples |
|---|---|---|
| EGAD00001008573 | HiSeq X Ten | 126 |
Dataset Description
The IYDP dataset includes BAM files of 126 Y chromosomes extracted from whole genome sequences. These are from individuals from a broad range of Indonesian islands - communities close to mainland Asia through to New Guinea. The original whole genome sequencing libraries were prepared using TruSeq DNA PCR-Free and TruSeq Nano DNA HT kits depending on DNA quantity. 150 bp paired-end sequencing was performed on the Illumina HiSeq X sequencer. Individuals were sequenced to expected mean depth of 30x, with an achieved median depth of raw reads across samples of 43x.
Data Use Conditions
POA RUO NPU PUB COL IRB US PS
See further information on Data Use Conditions
| Label | Code | Version | Modifier |
|---|---|---|---|
| population origins or ancestry research only | DUO:0000011 | 2021-02-23 | |
| obsolete research use only | DUO:0000014 | 2021-02-23 | |
| data use modifier | DUO:0000017 | 2021-02-23 | |
| not for profit, non commercial use only | DUO:0000018 | 2021-02-23 | |
| publication required | DUO:0000019 | 2021-02-23 | |
| collaboration required | DUO:0000020 | 2021-02-23 | |
| ethics approval required | DUO:0000021 | 2021-02-23 | |
| user specific restriction | DUO:0000026 | 2021-02-23 | |
| project specific restriction | DUO:0000027 | 2021-02-23 |
