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Longitudinal tracking of CRC patients

Heatrich-BS was performed on 14 patients monitored across 5-8 timepoints each. The predicted tumor fraction trend was compared with CEA values and tumor measurements from CT scans.

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Policy for processing data access request

Policy for processing data access requests This policy describes how the NUS cfDNA Data Access Committee (DAC) will process requests for datasets stored in the European Genome-phenome Archive (EGA), when those datasets are made available by manuscripts that specifically reference this policy. Purpose 1. To ensure that applicants are qualified investigators, affiliated with an academic, non- profit, or government research organization. 2. To ensure that users of the data agree to comply with applicable laws, including requirements as outlined in any governing consent and appropriate ethical approvals, along with any restrictions for the data in question. General principles Introduction The DAC will consider applications for access to datasets stored in the EGA when authorized to do so in accordance with this policy. Access to data will be granted to qualified researchers for appropriate use. A qualified researcher refers to a scientist who is employed, or legitimately affiliated with an academic, non-profit, or government research organization. Access to data will be granted to researchers for appropriate use and will be governed by the provisions and terms contained in the Data Access Agreement and consistent with an informed consent (if applicable). The DAC is concerned only with access to the data stored within the EGA with this DAC as the designated data access committee. Access is conditional upon availability of data and a signed agreement governing issues related to publication, data use, data storage, data disposal, ethical approval, and confidentiality. Application procedure To request access to data from the EGA, you will be asked to complete a basic application form and to agree to the terms and conditions laid out in the Data Access Agreement (DAA). The DAA must be signed by both a representative with institutional authority to sign on behalf of your organization, and the principal investigator responsible for the research project. You will also be requested to list personnel who will be granted access to the data for the purposes of the research project. If your application is successful, you will be asked to designate a “registered user”, under the authority of the principal investigator, who will be issued with a username and password by the EGA to enable access to the database. The DAC will consider applications that include named collaborators, but each institution must sign a separate DAA. Should you wish to share the data with additional collaborators not previously approved, they must make a separate application for access to the data. You agree to use the data only for the approved purpose and project described in your application; use of the data for a new purpose or new or expanded project will require a new application and approval. Assessment criteria Each application will be assessed to determine if: ● it has been submitted by a qualified researcher or researchers, embedded in a recognized research institution that can provide institutional responsibility for appropriate research governance ● the project described constitutes “biomedical research” in the context of the consent process, and is likely to be understood as such by the sample donors ● it breaches any of the ethical permissions or restrictions in the consent forms for any component cohort or collection The DAC will use these practices in its assessment: ● The DAC explicitly does NOT attempt to peer review the scientific quality of proposals. However, it does ask for a brief summary of the research to be undertaken, in order to judge whether it falls within the scope of the consents. Reporting The DAC may periodically report publicly on the requests received and their disposition, including reasons for access refusal. Acknowledgments Purpose adapted from the Blueprint Data Access Committee Terms of Reference. General principles adapted from the Blueprint Data Access Committee General Principles.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006198 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00006143484 fq.gz 415.3 MB Report
EGAF00006143485 fq.gz 404.0 MB Report
EGAF00006143486 fq.gz 81.7 MB Report
EGAF00006143487 fq.gz 78.1 MB Report
EGAF00006143488 fq.gz 186.6 MB Report
EGAF00006143489 fq.gz 175.2 MB Report
EGAF00006143490 fq.gz 362.5 MB Report
EGAF00006143491 fq.gz 338.6 MB Report
EGAF00006143494 fq.gz 204.3 MB Report
EGAF00006143495 fq.gz 190.5 MB Report
EGAF00006143496 fq.gz 263.0 MB Report
EGAF00006143497 fq.gz 247.3 MB Report
EGAF00006143498 fq.gz 231.3 MB Report
EGAF00006143499 fq.gz 218.1 MB Report
EGAF00006143500 fq.gz 291.3 MB Report
EGAF00006143501 fq.gz 265.7 MB Report
EGAF00006143502 fq.gz 209.0 MB Report
EGAF00006143503 fq.gz 194.3 MB Report
EGAF00006143504 fq.gz 337.7 MB Report
EGAF00006143505 fq.gz 314.1 MB Report
EGAF00006143506 fq.gz 101.7 MB Report
EGAF00006143507 fq.gz 94.8 MB Report
EGAF00006143508 fq.gz 385.1 MB Report
EGAF00006143509 fq.gz 355.7 MB Report
EGAF00006143510 fq.gz 246.8 MB Report
EGAF00006143511 fq.gz 237.4 MB Report
EGAF00006143516 fastq.gz 174.4 MB Report
EGAF00006143517 fastq.gz 193.8 MB Report
EGAF00006143518 fq.gz 419.4 MB Report
EGAF00006143519 fq.gz 392.5 MB Report
EGAF00006143520 fastq.gz 234.4 MB Report
EGAF00006143521 fastq.gz 255.8 MB Report
EGAF00006143522 fq.gz 187.1 MB Report
EGAF00006143523 fq.gz 172.1 MB Report
EGAF00006143528 fq.gz 147.5 MB Report
EGAF00006143529 fq.gz 142.0 MB Report
EGAF00006143532 fq.gz 421.5 MB Report
EGAF00006143533 fq.gz 407.8 MB Report
EGAF00006143534 fq.gz 352.6 MB Report
EGAF00006143535 fq.gz 324.7 MB Report
EGAF00006143536 fq.gz 273.5 MB Report
EGAF00006143537 fq.gz 263.3 MB Report
EGAF00006143538 fq.gz 187.1 MB Report
EGAF00006143539 fq.gz 175.4 MB Report
EGAF00006143540 fq.gz 701.1 MB Report
EGAF00006143541 fq.gz 652.6 MB Report
EGAF00006143542 fq.gz 188.9 MB Report
EGAF00006143543 fq.gz 174.9 MB Report
EGAF00006143544 fq.gz 409.8 MB Report
EGAF00006143545 fq.gz 383.6 MB Report
EGAF00006143546 fq.gz 411.1 MB Report
EGAF00006143547 fq.gz 369.9 MB Report
EGAF00006143548 fq.gz 610.7 MB Report
EGAF00006143549 fq.gz 559.5 MB Report
EGAF00006143550 fq.gz 127.0 MB Report
EGAF00006143551 fq.gz 118.9 MB Report
EGAF00006143552 fastq.gz 244.3 MB Report
EGAF00006143553 fastq.gz 263.3 MB Report
EGAF00006143554 fastq.gz 33.2 MB Report
EGAF00006143555 fastq.gz 36.0 MB Report
EGAF00006143556 fq.gz 159.0 MB Report
EGAF00006143557 fq.gz 146.7 MB Report
EGAF00006143558 fq.gz 135.3 MB Report
EGAF00006143559 fq.gz 126.7 MB Report
EGAF00006143560 fq.gz 656.5 MB Report
EGAF00006143561 fq.gz 624.5 MB Report
EGAF00006143566 fq.gz 213.6 MB Report
EGAF00006143567 fq.gz 196.9 MB Report
EGAF00006143570 fq.gz 143.0 MB Report
EGAF00006143571 fq.gz 155.7 MB Report
EGAF00006143572 fq.gz 262.8 MB Report
EGAF00006143573 fq.gz 241.6 MB Report
EGAF00006143574 fq.gz 264.1 MB Report
EGAF00006143575 fq.gz 256.5 MB Report
EGAF00006143576 fq.gz 584.1 MB Report
EGAF00006143577 fq.gz 557.9 MB Report
EGAF00006143578 fq.gz 801.3 MB Report
EGAF00006143579 fq.gz 751.0 MB Report
EGAF00006143580 fq.gz 420.3 MB Report
EGAF00006143581 fq.gz 392.1 MB Report
EGAF00006143582 fq.gz 625.2 MB Report
EGAF00006143583 fq.gz 579.7 MB Report
EGAF00006143584 fq.gz 231.5 MB Report
EGAF00006143585 fq.gz 217.2 MB Report
EGAF00006143588 fastq.gz 261.2 MB Report
EGAF00006143589 fastq.gz 285.6 MB Report
EGAF00006143592 fq.gz 264.3 MB Report
EGAF00006143593 fq.gz 244.1 MB Report
EGAF00006143596 fq.gz 257.4 MB Report
EGAF00006143597 fq.gz 254.6 MB Report
EGAF00006143598 fq.gz 373.1 MB Report
EGAF00006143599 fq.gz 342.5 MB Report
EGAF00006143600 fastq.gz 537.5 MB Report
EGAF00006143601 fastq.gz 579.1 MB Report
EGAF00006143602 fq.gz 276.2 MB Report
EGAF00006143603 fq.gz 257.2 MB Report
EGAF00006143604 fastq.gz 175.9 MB Report
EGAF00006143605 fastq.gz 186.0 MB Report
EGAF00006143606 fq.gz 779.4 MB Report
EGAF00006143607 fq.gz 728.5 MB Report
EGAF00006143608 fastq.gz 272.0 MB Report
EGAF00006143609 fastq.gz 287.4 MB Report
EGAF00006143610 fq.gz 196.1 MB Report
EGAF00006143611 fq.gz 184.1 MB Report
EGAF00006143612 fq.gz 754.4 MB Report
EGAF00006143613 fq.gz 712.6 MB Report
EGAF00006143614 fq.gz 157.8 MB Report
EGAF00006143615 fq.gz 151.3 MB Report
EGAF00006143616 fq.gz 94.7 MB Report
EGAF00006143617 fq.gz 91.1 MB Report
EGAF00006143618 fq.gz 422.7 MB Report
EGAF00006143619 fq.gz 416.7 MB Report
EGAF00006143620 fq.gz 344.2 MB Report
EGAF00006143621 fq.gz 321.4 MB Report
EGAF00006143622 fq.gz 276.0 MB Report
EGAF00006143623 fq.gz 255.7 MB Report
EGAF00006143624 fq.gz 352.9 MB Report
EGAF00006143625 fq.gz 322.8 MB Report
EGAF00006143626 fq.gz 304.0 MB Report
EGAF00006143627 fq.gz 280.3 MB Report
EGAF00006143628 fq.gz 276.8 MB Report
EGAF00006143629 fq.gz 255.5 MB Report
EGAF00006143630 fastq.gz 148.3 MB Report
EGAF00006143631 fastq.gz 163.7 MB Report
EGAF00006143632 fq.gz 379.8 MB Report
EGAF00006143633 fq.gz 358.2 MB Report
EGAF00006143634 fq.gz 828.7 MB Report
EGAF00006143635 fq.gz 765.0 MB Report
EGAF00006143636 fq.gz 92.0 MB Report
EGAF00006143637 fq.gz 88.6 MB Report
EGAF00006143640 fastq.gz 72.3 MB Report
EGAF00006143641 fastq.gz 77.0 MB Report
EGAF00006143642 fastq.gz 165.0 MB Report
EGAF00006143643 fastq.gz 175.3 MB Report
EGAF00006143644 fastq.gz 301.0 MB Report
EGAF00006143645 fastq.gz 325.1 MB Report
EGAF00006143652 fq.gz 1.3 GB Report
EGAF00006143653 fq.gz 1.2 GB Report
EGAF00006143654 fq.gz 211.1 MB Report
EGAF00006143655 fq.gz 196.2 MB Report
EGAF00006143656 fq.gz 263.0 MB Report
EGAF00006143657 fq.gz 246.2 MB Report
EGAF00006143664 fq.gz 354.5 MB Report
EGAF00006143665 fq.gz 324.7 MB Report
EGAF00006143666 fq.gz 373.8 MB Report
EGAF00006143667 fq.gz 344.6 MB Report
EGAF00006143668 fastq.gz 90.1 MB Report
EGAF00006143669 fastq.gz 98.8 MB Report
EGAF00006143670 fq.gz 224.5 MB Report
EGAF00006143671 fq.gz 210.0 MB Report
EGAF00006143672 fq.gz 338.2 MB Report
EGAF00006143673 fq.gz 308.2 MB Report
EGAF00006143674 fastq.gz 394.5 MB Report
EGAF00006143675 fastq.gz 431.7 MB Report
EGAF00006143676 fastq.gz 231.2 MB Report
EGAF00006143677 fastq.gz 246.2 MB Report
EGAF00006143678 fastq.gz 173.5 MB Report
EGAF00006143679 fastq.gz 200.4 MB Report
158 Files (49.5 GB)