About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Understanding the multicellular dynamics of clear cell renal cell carcinoma - spatial transcriptomics

The dataset comprises of transcriptomes of tissue sections derived from either the tumour normal interface or tumour core from clear cell renal cell carcinomas. 16 sections are sampled in total using 10x Genomics' Visium technology.

Request Access

DUO:0000019
version: 2021-02-23

publication required

This data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.

DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006045 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00006168220 cram 7.1 GB Report
EGAF00006168221 cram 7.4 GB Report
EGAF00006168222 cram 6.5 GB Report
EGAF00006168223 cram 7.6 GB Report
EGAF00006168224 cram 6.6 GB Report
EGAF00006168225 cram 8.0 GB Report
EGAF00006168226 cram 7.8 GB Report
EGAF00006168227 cram 5.7 GB Report
EGAF00006168228 cram 6.9 GB Report
EGAF00006168229 cram 6.6 GB Report
EGAF00006168230 cram 6.2 GB Report
EGAF00006168231 cram 6.9 GB Report
EGAF00006168232 cram 7.3 GB Report
EGAF00006168233 cram 6.1 GB Report
EGAF00006168234 cram 6.3 GB Report
EGAF00006168235 cram 7.2 GB Report
16 Files (110.1 GB)