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RNAseq data

Individual FASTQ files from RNA sequencing.

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Genentech Data Access Agreement for Academic Institutions

GENENTECH DATA ACCESS COMMITTEE DATA ACCESS AGREEMENT This Data Access Agreement (“Agreement”) between Genentech, Inc. (“Genentech”) and User andUser Institution (as defined below) governs the terms on which access will be granted to thegenotype data obtained from Genentech. In signing this Agreement, User and User Institution agree to be bound by the terms and conditions of access set out in this Agreement. For the sake of clarity, the terms of access set out in this Agreement shall govern activities conducted by the User and the User Institution (as defined below). User Institution and User are referred to within the Agreement as “You” and “Your” for convenience only. Definitions: gRED means Genentech Research and Early Development. Data means all and any human genetic data generated by gRED and requested by User through submission of an Application for Access to Genotype Data and obtained from Genentech under the terms of this Agreement. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher who has requested Data by submitting an Application for Access to Genotype Data to gRED and whose User Institution has previously completed this Data Access Agreement with respect to such Data and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organization at which the User is employed, affiliated or enrolled. Genentech Data Access Committee means members of the gRED organization that are responsible for making the data access decisions for the genotype data generated by gRED. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research. 2. You agree not to use the data for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy.DSC: Academic Data Access Agreement vMar2021 1 4. You agree not to attempt to link the Data provided under this Agreement to any other data source on the same samples or to link the Data to any person or otherwise identify any Data Subject from the Data. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programmanagement. Should You wish to share the Data with a collaborator outside the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the Data for the approved purpose and project described in your Application for Access to Raw Exome Sequencing and/or RNA Sequencing Data; use of the Data for a new purpose or project will require a new application and approval. You agree to restrict your use of the Data to the analysis of somatic mutations and/or gene expression level only; use of these data to infer genotype is not permitted. 7. You agree that publication of Your purpose, project, and results is restricted for a one (1) year period starting from the publication date of the Genentech publication referencing the Data deposit. You will be free to publish the results of the research using the Data for the approved purpose after the one (1) year period has expired. You will not publish the Data, but will refer to the original Data deposit by Genentech and agree to acknowledge in any such publication that the research makes use of Data generated by Genentech. 8. You accept that Genentech: (a) bears no legal responsibility for the accuracy or comprehensiveness of the Data; and (b) accepts no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 9. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 10. You recognize that nothing in this Agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. 11. You agree that You will submit a report to the Genentech Data Access Committee, if requested, on completion of the approved purpose. The Genentech Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 12. (a) You agree to use the Data in accordance with all applicable laws, including but not limited to applicable data privacy laws. (b)The Genentech Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures. 13. This Agreement shall be effective as of the date of the last party to sign below (“Effective Date”) and shall terminate three (3) years after the Effective Date, unless terminated sooner pursuant to Section 14 below. Upon termination, You will be required to destroy any Data held. 14. You accept that this Agreement will terminate immediately upon any breach of this Agreement by You. Either party may terminate this Agreement upon thirty (30) days written notice for any reason. The following Sections of this Agreement shall survive its expiration or termination:DSC: Academic Data Access Agreement vMar2021 2 Sections 1 – 10, 12(a), and 14-17 15. Nothing herein shall create any association, partnership, joint venture, fiduciary duty or the relation of principal and agent between the parties hereto, it being understood that each party is acting as an independent contractor, and neither party shall have the authority to bind the other or the other’s representatives in any way. 16. Except as required by law or permitted under Section 7, neither party shall use or refer to this Agreement in the public media, or use the names or marks of the other party without express prior written permission. 17. This Agreement may be executed by the parties hereto in separate counterparts, each of which when so executed and delivered shall be deemed an original, but all such counterparts shall together constitute one and the same agreement. The parties agree that execution of this Agreement by exchanging facsimile, PDF, or e-Signature (as defined below) signatures shall have the same legal force and effect as the exchange of original signatures. Pursuant to this Agreement, e-Signatures shall mean a signature that consists of one or more letters, characters, numbers or other symbols in digital form incorporated in, attached to or associated with the electronic document, that (a) is unique to the person making the signature; (b) the technology or process used to make the signature is under the sole control of the person making the signature; (b) the technology or process can be used to identify the person using the technology or process; and (d) the electronic signature can be linked with an electronic document in such a way that it can be used to determine whether the electronic document has been changed since the electronic signature was incorporated in, attached to or associated with the electronic document. The written form shall be required to make changes to this clause as well. IN WITNESS WHEREOF, the parties have caused this Agreement to be executed by their respective duly authorized representatives as set forth below. Genentech, Inc. For and on behalf of User Institution: (Institutional or Administrative Authority) Signature: Signature: Print Name: Print Name: Title: Title: Date: Date: Read and acknowledged by User/Applicant: Signature: Print Name: Title: Date:DSC: Academic Data Access Agreement vMar2021 3

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006004 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006173656 fastq.gz 2.4 GB
EGAF00006173657 fastq.gz 2.5 GB
EGAF00006173658 fastq.gz 2.2 GB
EGAF00006173659 fastq.gz 2.4 GB
EGAF00006173660 fastq.gz 2.4 GB
EGAF00006173661 fastq.gz 2.5 GB
EGAF00006173662 fastq.gz 2.3 GB
EGAF00006173663 fastq.gz 2.4 GB
EGAF00006173664 fastq.gz 2.4 GB
EGAF00006173665 fastq.gz 2.5 GB
EGAF00006173666 fastq.gz 2.3 GB
EGAF00006173667 fastq.gz 2.4 GB
EGAF00006173668 fastq.gz 2.4 GB
EGAF00006173669 fastq.gz 2.5 GB
EGAF00006173670 fastq.gz 2.4 GB
EGAF00006173671 fastq.gz 2.5 GB
EGAF00006173672 fastq.gz 2.3 GB
EGAF00006173673 fastq.gz 2.4 GB
EGAF00006173674 fastq.gz 2.5 GB
EGAF00006173675 fastq.gz 2.6 GB
EGAF00006173676 fastq.gz 2.4 GB
EGAF00006173677 fastq.gz 2.5 GB
EGAF00006173678 fastq.gz 2.4 GB
EGAF00006173679 fastq.gz 2.5 GB
EGAF00006173680 fastq.gz 2.3 GB
EGAF00006173681 fastq.gz 2.4 GB
EGAF00006173682 fastq.gz 2.3 GB
EGAF00006173683 fastq.gz 2.5 GB
EGAF00006173684 fastq.gz 2.6 GB
EGAF00006173685 fastq.gz 2.7 GB
EGAF00006173686 fastq.gz 2.5 GB
EGAF00006173687 fastq.gz 2.6 GB
EGAF00006173688 fastq.gz 2.5 GB
EGAF00006173689 fastq.gz 2.6 GB
EGAF00006173690 fastq.gz 2.4 GB
EGAF00006173691 fastq.gz 2.5 GB
EGAF00006173692 fastq.gz 2.2 GB
EGAF00006173693 fastq.gz 2.3 GB
EGAF00006173694 fastq.gz 2.3 GB
EGAF00006173695 fastq.gz 2.5 GB
EGAF00006173696 fastq.gz 2.6 GB
EGAF00006173697 fastq.gz 2.7 GB
EGAF00006173698 fastq.gz 2.3 GB
EGAF00006173699 fastq.gz 2.3 GB
EGAF00006173700 fastq.gz 2.3 GB
EGAF00006173701 fastq.gz 2.4 GB
EGAF00006173702 fastq.gz 2.4 GB
EGAF00006173703 fastq.gz 2.6 GB
EGAF00006173704 fastq.gz 2.4 GB
EGAF00006173705 fastq.gz 2.5 GB
EGAF00006173706 fastq.gz 2.3 GB
EGAF00006173707 fastq.gz 2.4 GB
EGAF00006173708 fastq.gz 2.3 GB
EGAF00006173709 fastq.gz 2.3 GB
EGAF00006173710 fastq.gz 2.5 GB
EGAF00006173711 fastq.gz 2.5 GB
EGAF00006173712 fastq.gz 2.3 GB
EGAF00006173713 fastq.gz 2.5 GB
EGAF00006173714 fastq.gz 2.4 GB
EGAF00006173715 fastq.gz 2.4 GB
EGAF00006173716 fastq.gz 2.2 GB
EGAF00006173717 fastq.gz 2.3 GB
EGAF00006173718 fastq.gz 2.2 GB
EGAF00006173719 fastq.gz 2.3 GB
EGAF00006173720 fastq.gz 2.5 GB
EGAF00006173721 fastq.gz 2.6 GB
EGAF00006173722 fastq.gz 2.5 GB
EGAF00006173723 fastq.gz 2.6 GB
EGAF00006173724 fastq.gz 2.4 GB
EGAF00006173725 fastq.gz 2.5 GB
EGAF00006173726 fastq.gz 2.5 GB
EGAF00006173727 fastq.gz 2.6 GB
EGAF00006173728 fastq.gz 2.4 GB
EGAF00006173729 fastq.gz 2.6 GB
EGAF00006173730 fastq.gz 2.4 GB
EGAF00006173731 fastq.gz 2.5 GB
EGAF00006173732 fastq.gz 2.9 GB
EGAF00006173733 fastq.gz 3.0 GB
EGAF00006173734 fastq.gz 2.3 GB
EGAF00006173735 fastq.gz 2.4 GB
EGAF00006173736 fastq.gz 2.3 GB
EGAF00006173737 fastq.gz 2.3 GB
EGAF00006173738 fastq.gz 2.5 GB
EGAF00006173739 fastq.gz 2.5 GB
EGAF00006173740 fastq.gz 2.3 GB
EGAF00006173741 fastq.gz 2.4 GB
EGAF00006173742 fastq.gz 2.7 GB
EGAF00006173743 fastq.gz 2.8 GB
EGAF00006173744 fastq.gz 2.5 GB
EGAF00006173745 fastq.gz 2.6 GB
EGAF00006173746 fastq.gz 2.3 GB
EGAF00006173747 fastq.gz 2.4 GB
EGAF00006173748 fastq.gz 2.5 GB
EGAF00006173749 fastq.gz 2.6 GB
EGAF00006173750 fastq.gz 2.3 GB
EGAF00006173751 fastq.gz 2.3 GB
EGAF00006173752 fastq.gz 2.3 GB
EGAF00006173753 fastq.gz 2.3 GB
EGAF00006173754 fastq.gz 2.6 GB
EGAF00006173755 fastq.gz 2.7 GB
EGAF00006173756 fastq.gz 2.2 GB
EGAF00006173757 fastq.gz 2.3 GB
EGAF00006173758 fastq.gz 2.2 GB
EGAF00006173759 fastq.gz 2.3 GB
EGAF00006173760 fastq.gz 2.2 GB
EGAF00006173761 fastq.gz 2.3 GB
EGAF00006173762 fastq.gz 2.3 GB
EGAF00006173763 fastq.gz 2.4 GB
EGAF00006173764 fastq.gz 2.4 GB
EGAF00006173765 fastq.gz 2.5 GB
EGAF00006173766 fastq.gz 2.6 GB
EGAF00006173767 fastq.gz 2.7 GB
EGAF00006173768 fastq.gz 2.1 GB
EGAF00006173769 fastq.gz 2.3 GB
EGAF00006173770 fastq.gz 2.6 GB
EGAF00006173771 fastq.gz 2.6 GB
EGAF00006173772 fastq.gz 2.3 GB
EGAF00006173773 fastq.gz 2.4 GB
EGAF00006173774 fastq.gz 2.9 GB
EGAF00006173775 fastq.gz 3.0 GB
EGAF00006173776 fastq.gz 2.4 GB
EGAF00006173777 fastq.gz 2.5 GB
EGAF00006173778 fastq.gz 2.5 GB
EGAF00006173779 fastq.gz 2.5 GB
EGAF00006173780 fastq.gz 2.4 GB
EGAF00006173781 fastq.gz 2.5 GB
EGAF00006173782 fastq.gz 2.5 GB
EGAF00006173783 fastq.gz 2.6 GB
EGAF00006173784 fastq.gz 2.4 GB
EGAF00006173785 fastq.gz 2.4 GB
EGAF00006173786 fastq.gz 2.4 GB
EGAF00006173787 fastq.gz 2.5 GB
132 Files (323.0 GB)