About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

Dataset for GIST-WHOLE_GENOME

Rare cancer sequencing data of 18 runs in tumor/control pairs, which were uploaded to umbrella studies. The sequencing was always paired

Request Access

DUO:0000026
version: 2019-01-07

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004338 Cancer Genomics
EGAS00001004813 Other
EGAS00001005145 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004458006 bam 138.6 GB Report
EGAF00004458046 bam 145.0 GB Report
EGAF00005002832 bam 173.7 GB Report
EGAF00005002849 bam 168.2 GB Report
EGAF00005305189 bam 155.1 GB Report
EGAF00005323576 bam 159.6 GB Report
EGAF00005397039 bam 168.3 GB Report
EGAF00006067918 fastq.gz 34.2 GB Report
EGAF00006067919 fastq.gz 35.4 GB Report
EGAF00006067920 fastq.gz 29.4 GB Report
EGAF00006067921 fastq.gz 30.9 GB Report
EGAF00006067992 fastq.gz 39.8 GB Report
EGAF00006067993 fastq.gz 45.9 GB Report
EGAF00006067994 fastq.gz 28.6 GB Report
EGAF00006067995 fastq.gz 33.6 GB Report
EGAF00006067996 fastq.gz 43.1 GB Report
EGAF00006067997 fastq.gz 50.7 GB Report
EGAF00006067998 fastq.gz 34.0 GB Report
EGAF00006067999 fastq.gz 39.7 GB Report
EGAF00006068000 fastq.gz 31.4 GB Report
EGAF00006068001 fastq.gz 34.2 GB Report
EGAF00006068004 fastq.gz 34.3 GB Report
EGAF00006068005 fastq.gz 36.8 GB Report
EGAF00006068040 fastq.gz 33.8 GB Report
EGAF00006068041 fastq.gz 36.9 GB Report
EGAF00006068042 fastq.gz 9.2 GB Report
EGAF00006068043 fastq.gz 11.1 GB Report
EGAF00006068044 fastq.gz 32.0 GB Report
EGAF00006068045 fastq.gz 32.7 GB Report
EGAF00006176330 txt 159 Bytes
30 Files (1.8 TB)