About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Dataset for liposarcoma-WHOLE_GENOME

Rare cancer sequencing data of 48 runs in tumor/control pairs, which were uploaded to umbrella studies. The sequencing was always paired

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DUO:0000026
version: 2019-01-07

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004338 Cancer Genomics
EGAS00001004813 Other
EGAS00001005145 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004454594 bam 142.8 GB Report
EGAF00004454673 bam 149.0 GB Report
EGAF00004457979 bam 133.9 GB Report
EGAF00004457987 bam 152.5 GB Report
EGAF00004457990 bam 141.2 GB Report
EGAF00004457991 bam 144.7 GB Report
EGAF00004457993 bam 145.6 GB Report
EGAF00004458034 bam 146.2 GB Report
EGAF00004458035 bam 132.2 GB Report
EGAF00004458039 bam 187.3 GB Report
EGAF00004458043 bam 143.7 GB Report
EGAF00004458044 bam 135.9 GB Report
EGAF00004458067 bam 144.0 GB Report
EGAF00004458077 bam 177.5 GB Report
EGAF00004458084 bam 151.3 GB Report
EGAF00004458090 bam 133.5 GB Report
EGAF00004693112 bam 140.9 GB Report
EGAF00004693117 bam 149.8 GB Report
EGAF00004721723 bam 137.8 GB Report
EGAF00004842188 bam 144.7 GB Report
EGAF00004842221 bam 131.5 GB Report
EGAF00004842224 bam 127.9 GB Report
EGAF00004842245 bam 319.9 GB Report
EGAF00004842248 bam 161.5 GB Report
EGAF00004842250 bam 144.7 GB Report
EGAF00004842253 bam 149.5 GB Report
EGAF00004915592 bam 150.8 GB Report
EGAF00005299748 bam 142.8 GB Report
EGAF00005299764 bam 132.2 GB Report
EGAF00005305211 bam 161.0 GB Report
EGAF00005331872 bam 131.5 GB Report
EGAF00005444054 bam 136.1 GB Report
EGAF00005444060 bam 334.6 GB Report
EGAF00006160660 fastq.gz 35.5 GB Report
EGAF00006160661 fastq.gz 39.3 GB Report
EGAF00006160662 fastq.gz 37.7 GB Report
EGAF00006160663 fastq.gz 43.3 GB Report
EGAF00006160664 fastq.gz 36.3 GB Report
EGAF00006160665 fastq.gz 40.6 GB Report
EGAF00006160676 fastq.gz 35.4 GB Report
EGAF00006160677 fastq.gz 39.5 GB Report
EGAF00006160708 fastq.gz 35.5 GB Report
EGAF00006160709 fastq.gz 40.4 GB Report
EGAF00006160712 fastq.gz 37.6 GB Report
EGAF00006160713 fastq.gz 42.8 GB Report
EGAF00006160720 fastq.gz 36.9 GB Report
EGAF00006160721 fastq.gz 41.5 GB Report
EGAF00006160722 fastq.gz 35.2 GB Report
EGAF00006160723 fastq.gz 39.0 GB Report
EGAF00006160724 fastq.gz 35.3 GB Report
EGAF00006160725 fastq.gz 40.3 GB Report
EGAF00006160738 fastq.gz 35.7 GB Report
EGAF00006160739 fastq.gz 40.1 GB Report
EGAF00006165213 fastq.gz 36.9 GB Report
EGAF00006165214 fastq.gz 40.5 GB Report
EGAF00006165263 fastq.gz 36.6 GB Report
EGAF00006165264 fastq.gz 40.6 GB Report
EGAF00006166957 fastq.gz 40.3 GB Report
EGAF00006166958 fastq.gz 45.1 GB Report
EGAF00006166961 fastq.gz 40.7 GB Report
EGAF00006166962 fastq.gz 45.6 GB Report
EGAF00006176343 txt 160 Bytes
62 Files (6.3 TB)