About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Illumina RNA-Seq paired of 10 different tumor samples from the Master program (H021)

Fastq files of paired RNA-Seq of 10 different tumor samples, for which Nanopore and Illumina sequencing was compared. Illumina sequencing was carried out with HiSeq4000 or HiSeq X-Ten using the Illumina TruSeq stranded mRNA Kit.

Request Access

DUO:0000026
version: 2019-01-07

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006317 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00006210010 fastq.gz 3.9 GB Report
EGAF00006210011 fastq.gz 4.4 GB Report
EGAF00006210012 fastq.gz 3.1 GB Report
EGAF00006210013 fastq.gz 3.4 GB Report
EGAF00006210014 fastq.gz 4.2 GB Report
EGAF00006210015 fastq.gz 4.6 GB Report
EGAF00006210016 fastq.gz 4.1 GB Report
EGAF00006210017 fastq.gz 4.6 GB Report
EGAF00006210018 fastq.gz 38.0 GB Report
EGAF00006210019 fastq.gz 42.3 GB Report
EGAF00006210020 fastq.gz 5.2 GB Report
EGAF00006210021 fastq.gz 5.8 GB Report
EGAF00006210022 fastq.gz 43.2 GB Report
EGAF00006210023 fastq.gz 50.0 GB Report
EGAF00006210024 fastq.gz 3.6 GB Report
EGAF00006210025 fastq.gz 3.8 GB Report
EGAF00006210026 fastq.gz 5.0 GB Report
EGAF00006210027 fastq.gz 5.5 GB Report
EGAF00006210028 fastq.gz 38.9 GB Report
EGAF00006210029 fastq.gz 46.7 GB Report
EGAF00006210030 fastq.gz 3.6 GB Report
EGAF00006210031 fastq.gz 3.9 GB Report
EGAF00006210032 fastq.gz 3.7 GB Report
EGAF00006210033 fastq.gz 3.9 GB Report
EGAF00006210381 fastq.gz 3.1 GB Report
EGAF00006210382 fastq.gz 3.4 GB Report
EGAF00006210383 fastq.gz 3.7 GB Report
EGAF00006210384 fastq.gz 4.0 GB Report
28 Files (349.6 GB)