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Bulk RNA-seq of stromal cells from multiple cancer types

We sorted CD45-CD44+CD90+ stromal cells from multiple tumor types and performed bulk RNA-sequencing.

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GENENTECH DATA ACCESS COMMITTEEDATA ACCESS AGREEMENT

GENENTECH DATA ACCESS COMMITTEEDATA ACCESS AGREEMENT WITH COMMERCIAL ORGANIZATIONThis Data Access Agreement (“Agreement”) between Genentech, Inc. (“Genentech”) and User and User Organization (as defined below) governs the terms on which access will be granted to the genotype data obtained from Genentech.In signing this Agreement, User and User Organization agree to be bound by the terms and conditions of access set out in this Agreement.For the sake of clarity, the terms of access set out in this Agreement apply both to the User and the User Organization (as defined below). User Organization and User are referred to within the Agreement as “You” and “Your” shall be construed accordingly.Definitions: gRED means Genentech Research and Early Development.Data means all and any human genetic data obtained from Genentech and generated by gRED. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto.User means a researcher whose User Organization has previously completed this Data Access Agreement and has received acknowledgement of its acceptance.Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research.User Organization means the commercial organization at which the User is employed or affiliated.Genentech Data Access Committee means members of the gRED organization that is responsible for making the data access decisions for the genotype data generated by gRED.Terms and Conditions: In signing this Agreement:1.You agree to use the Data only for the advancement of medical research.2.You agree to preserve, at all times, the confidentiality of Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy.3.You agree not to attempt to link the Data provided under this Agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevant access committees.4.You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or program management. Should You wish to share the Data with a collaborator outside the same Organization, the third party must make a separate application for access to the Data.5.You agree to use the Data for the approved purpose and project described in your application; use of the Data for a new purpose or project will require a new application and approval.6.You shall be free to publish the results of the research using the Data for the approved purpose. You agree to acknowledge in any such publication that the research makes use of Data generated by Genentech/gRED.7.You accept that Genentech:a.bears no legal responsibility for the accuracy or comprehensiveness of the Data; and b.accepts no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason.8.You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted.9.You recognize that nothing in this Agreement shall operate to transfer to the User Organization any intellectual property rights relating to the Data. The User Organization has the right to develop intellectual property based on the comparisons with their own data. Any invention or discovery made by User and/or User Organization arising out of the use of the Data (each a “Data Invention”) shall be promptly disclosed to Genentech in writing. User Organization hereby grants to Genentech a royalty-free, fully-paid, non-exclusive license (i) to make, use and import such Data Invention for internal research purposes; and (ii) to make, use, offer to sell, sell and import such Data Invention to the extent necessary to commercialize Genentech product(s), which license shall be sublicensable to Genentech’s affiliates and development and commercialization collaborators on such product(s). 10.You agree that you will submit a report to the Genentech Data Access Committee, if requested, on completion of the agreed purpose. The Genentech Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Organization.11.(a) You agree to use the Data in accordance with all applicable laws, including but not limited to applicable data privacy laws.(b) The Genentech Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures. 12.This Agreement shall be effective as of the date of the last party to sign below (“Effective Date”) and shall terminate three (3) years after the Effective Date, unless terminated sooner pursuant to Section 13 below.13.You accept that this Agreement will terminate immediately upon any breach of this Agreement by You and You will be required to destroy any Data held. Either Party may terminate this Agreement upon thirty (30) days written notice for any reason. The following Sections of this Agreement shall survive its expiration or termination: Sections 1 – 10, 11(a), and 13. For and on behalf of User/Applicant:___________________________Signature of User/Applicant___________________________Print Name of User/Applicant___________________________Title___________________________DateFor and on behalf of User Organization:___________________________Signature of Organizational or Administrative Authority___________________________Print Name___________________________Title___________________________Name of User Organization___________________________DateFor Genentech, Inc.:___________________________Signature___________________________Print Name___________________________Title___________________________Date

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006497 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006772971 fastq.gz 1.7 GB
EGAF00006772972 fastq.gz 1.9 GB
EGAF00006772973 fastq.gz 2.5 GB
EGAF00006772974 fastq.gz 2.8 GB
EGAF00006772975 fastq.gz 4.3 GB
EGAF00006772976 fastq.gz 5.0 GB
EGAF00006772977 fastq.gz 3.6 GB
EGAF00006772978 fastq.gz 4.2 GB
EGAF00006772979 fastq.gz 3.8 GB
EGAF00006772980 fastq.gz 4.5 GB
EGAF00006772981 fastq.gz 2.2 GB
EGAF00006772982 fastq.gz 2.3 GB
EGAF00006772983 fastq.gz 2.0 GB
EGAF00006772984 fastq.gz 2.1 GB
EGAF00006772985 gz 1.7 GB
EGAF00006772986 gz 1.9 GB
EGAF00006772987 fastq.gz 2.6 GB
EGAF00006772988 fastq.gz 2.8 GB
EGAF00006772989 fastq.gz 1.4 GB
EGAF00006772990 fastq.gz 1.5 GB
EGAF00006772991 fastq.gz 2.4 GB
EGAF00006772992 fastq.gz 2.6 GB
EGAF00006772993 fastq.gz 4.5 GB
EGAF00006772994 fastq.gz 4.9 GB
EGAF00006772995 fastq.gz 6.6 GB
EGAF00006772996 fastq.gz 7.5 GB
EGAF00006772997 fastq.gz 4.2 GB
EGAF00006772998 fastq.gz 5.0 GB
EGAF00006772999 fastq.gz 3.3 GB
EGAF00006773000 fastq.gz 4.0 GB
EGAF00006773001 fastq.gz 2.3 GB
EGAF00006773002 fastq.gz 2.6 GB
EGAF00006773003 fastq.gz 3.3 GB
EGAF00006773004 fastq.gz 3.6 GB
EGAF00006773005 fastq.gz 2.8 GB
EGAF00006773006 fastq.gz 2.9 GB
EGAF00006773007 fastq.gz 2.6 GB
EGAF00006773008 fastq.gz 2.9 GB
EGAF00006773009 fastq.gz 15.2 GB
EGAF00006773010 fastq.gz 16.2 GB
EGAF00006773011 fastq.gz 5.0 GB
EGAF00006773012 fastq.gz 5.4 GB
EGAF00006773013 fastq.gz 2.8 GB
EGAF00006773014 fastq.gz 3.0 GB
EGAF00006773015 fastq.gz 6.7 GB
EGAF00006773016 fastq.gz 6.9 GB
EGAF00006773017 fastq.gz 1.4 GB
EGAF00006773018 fastq.gz 1.5 GB
EGAF00006773019 fastq.gz 3.4 GB
EGAF00006773020 fastq.gz 3.7 GB
EGAF00006773021 fastq.gz 3.4 GB
EGAF00006773022 fastq.gz 3.6 GB
EGAF00006773023 gz 1.3 GB
EGAF00006773024 gz 1.4 GB
EGAF00006773025 gz 3.9 GB
EGAF00006773026 gz 4.2 GB
EGAF00006773027 fastq.gz 4.0 GB
EGAF00006773028 fastq.gz 4.6 GB
EGAF00006773029 fastq.gz 5.0 GB
EGAF00006773030 fastq.gz 5.7 GB
EGAF00006773031 fastq.gz 3.9 GB
EGAF00006773032 fastq.gz 4.5 GB
EGAF00006773033 fastq.gz 2.2 GB
EGAF00006773034 fastq.gz 2.7 GB
EGAF00006773035 fastq.gz 2.2 GB
EGAF00006773036 fastq.gz 2.7 GB
EGAF00006773037 fastq.gz 2.5 GB
EGAF00006773038 fastq.gz 3.1 GB
EGAF00006773039 fastq.gz 4.3 GB
EGAF00006773040 fastq.gz 5.3 GB
EGAF00006773041 fastq.gz 3.3 GB
EGAF00006773042 fastq.gz 3.7 GB
EGAF00006773043 fastq.gz 3.3 GB
EGAF00006773044 fastq.gz 3.5 GB
EGAF00006773045 fastq.gz 1.8 GB
EGAF00006773046 fastq.gz 2.0 GB
EGAF00006773047 fastq.gz 2.8 GB
EGAF00006773048 fastq.gz 3.1 GB
EGAF00006773049 fastq.gz 3.6 GB
EGAF00006773050 fastq.gz 3.9 GB
EGAF00006773051 fastq.gz 1.9 GB
EGAF00006773052 fastq.gz 2.2 GB
EGAF00006773053 fastq.gz 3.5 GB
EGAF00006773054 fastq.gz 3.9 GB
EGAF00006773055 gz 889.5 MB
EGAF00006773056 gz 970.3 MB
EGAF00006773057 fastq.gz 2.3 GB
EGAF00006773058 fastq.gz 2.5 GB
EGAF00006773059 fastq.gz 2.0 GB
EGAF00006773060 fastq.gz 3.9 GB
EGAF00006773061 fastq.gz 2.8 GB
EGAF00006773062 fastq.gz 3.1 GB
EGAF00006773063 fastq.gz 2.3 GB
EGAF00006773064 fastq.gz 2.5 GB
EGAF00006773065 fastq.gz 2.7 GB
EGAF00006773066 fastq.gz 2.9 GB
EGAF00006773067 fastq.gz 2.3 GB
EGAF00006773068 fastq.gz 2.5 GB
EGAF00006773069 fastq.gz 3.0 GB
EGAF00006773070 fastq.gz 3.2 GB
EGAF00006773071 fastq.gz 2.7 GB
EGAF00006773072 fastq.gz 2.9 GB
EGAF00006773073 fastq.gz 2.8 GB
EGAF00006773074 fastq.gz 2.9 GB
EGAF00006773075 fastq.gz 2.7 GB
EGAF00006773076 fastq.gz 2.9 GB
EGAF00006773077 fastq.gz 5.1 GB
EGAF00006773078 fastq.gz 5.5 GB
EGAF00006773079 fastq.gz 2.5 GB
EGAF00006773080 fastq.gz 2.6 GB
EGAF00006773081 fastq.gz 3.0 GB
EGAF00006773082 fastq.gz 3.2 GB
EGAF00006773083 gz 3.5 GB
EGAF00006773084 gz 3.8 GB
EGAF00006773085 gz 1.4 GB
EGAF00006773086 gz 1.6 GB
EGAF00006773087 fastq.gz 3.0 GB
EGAF00006773088 fastq.gz 3.3 GB
EGAF00006773089 fastq.gz 4.0 GB
EGAF00006773090 fastq.gz 4.4 GB
EGAF00006773091 fastq.gz 4.1 GB
EGAF00006773092 fastq.gz 4.8 GB
EGAF00006773093 fastq.gz 3.8 GB
EGAF00006773094 fastq.gz 4.4 GB
EGAF00006773095 fastq.gz 2.4 GB
EGAF00006773096 fastq.gz 3.0 GB
EGAF00006773097 fastq.gz 3.1 GB
EGAF00006773098 fastq.gz 3.5 GB
EGAF00006773099 fastq.gz 4.4 GB
EGAF00006773100 fastq.gz 5.1 GB
EGAF00006773101 fastq.gz 2.2 GB
EGAF00006773102 fastq.gz 2.4 GB
EGAF00006773103 fastq.gz 2.3 GB
EGAF00006773104 fastq.gz 2.5 GB
EGAF00006773105 fastq.gz 3.3 GB
EGAF00006773106 fastq.gz 3.8 GB
EGAF00006773107 fastq.gz 3.9 GB
EGAF00006773108 fastq.gz 4.6 GB
EGAF00006773109 fastq.gz 2.7 GB
EGAF00006773110 fastq.gz 2.9 GB
EGAF00006773111 fastq.gz 2.1 GB
EGAF00006773112 fastq.gz 2.4 GB
EGAF00006773113 fastq.gz 3.1 GB
EGAF00006773114 fastq.gz 3.5 GB
EGAF00006773115 fastq.gz 2.8 GB
EGAF00006773116 fastq.gz 3.1 GB
EGAF00006773117 fastq.gz 3.1 GB
EGAF00006773118 fastq.gz 3.2 GB
EGAF00006773119 fastq.gz 2.2 GB
EGAF00006773120 fastq.gz 2.4 GB
EGAF00006773121 fastq.gz 3.7 GB
EGAF00006773122 fastq.gz 4.0 GB
EGAF00006773123 fastq.gz 2.7 GB
EGAF00006773124 fastq.gz 2.8 GB
EGAF00006773125 fastq.gz 6.4 GB
EGAF00006773126 fastq.gz 6.7 GB
EGAF00006773127 fastq.gz 6.5 GB
EGAF00006773128 fastq.gz 6.9 GB
EGAF00006773129 gz 4.1 GB
EGAF00006773130 gz 4.5 GB
EGAF00006773131 fastq.gz 3.0 GB
EGAF00006773132 fastq.gz 3.3 GB
EGAF00006773133 fastq.gz 3.4 GB
EGAF00006773134 fastq.gz 3.8 GB
EGAF00006773135 fastq.gz 3.6 GB
EGAF00006773136 fastq.gz 4.0 GB
EGAF00006773137 fastq.gz 1.4 GB
EGAF00006773138 fastq.gz 1.5 GB
EGAF00006773139 fastq.gz 4.0 GB
EGAF00006773140 fastq.gz 4.6 GB
EGAF00006773141 fastq.gz 2.9 GB
EGAF00006773142 fastq.gz 3.1 GB
EGAF00006773143 fastq.gz 3.1 GB
EGAF00006773144 fastq.gz 3.5 GB
EGAF00006773145 fastq.gz 3.2 GB
EGAF00006773146 fastq.gz 3.5 GB
EGAF00006773147 fastq.gz 5.1 GB
EGAF00006773148 fastq.gz 5.6 GB
EGAF00006773149 fastq.gz 3.6 GB
EGAF00006773150 fastq.gz 3.9 GB
EGAF00006773151 fastq.gz 2.6 GB
EGAF00006773152 fastq.gz 2.8 GB
EGAF00006773153 fastq.gz 3.7 GB
EGAF00006773154 fastq.gz 4.2 GB
EGAF00006773155 fastq.gz 3.0 GB
EGAF00006773156 fastq.gz 3.3 GB
EGAF00006773157 fastq.gz 4.8 GB
EGAF00006773158 fastq.gz 4.9 GB
EGAF00006773159 fastq.gz 3.7 GB
EGAF00006773160 fastq.gz 4.4 GB
EGAF00006773161 fastq.gz 3.5 GB
EGAF00006773162 fastq.gz 4.2 GB
EGAF00006773163 fastq.gz 3.1 GB
EGAF00006773164 fastq.gz 3.4 GB
EGAF00006773165 fastq.gz 2.6 GB
EGAF00006773166 fastq.gz 2.8 GB
EGAF00006773167 fastq.gz 3.3 GB
EGAF00006773168 fastq.gz 3.6 GB
EGAF00006773169 fastq.gz 2.0 GB
EGAF00006773170 fastq.gz 2.2 GB
EGAF00006773171 fastq.gz 2.3 GB
EGAF00006773172 fastq.gz 2.5 GB
EGAF00006773173 fastq.gz 3.2 GB
EGAF00006773174 fastq.gz 3.4 GB
EGAF00006773175 fastq.gz 2.5 GB
EGAF00006773176 fastq.gz 2.6 GB
EGAF00006773177 fastq.gz 2.9 GB
EGAF00006773178 fastq.gz 3.3 GB
EGAF00006773179 fastq.gz 3.8 GB
EGAF00006773180 fastq.gz 4.0 GB
EGAF00006773181 fastq.gz 5.7 GB
EGAF00006773182 fastq.gz 5.8 GB
EGAF00006773183 fastq.gz 4.9 GB
EGAF00006773184 fastq.gz 5.1 GB
EGAF00006773185 fastq.gz 6.8 GB
EGAF00006773186 fastq.gz 7.1 GB
EGAF00006773187 fastq.gz 3.2 GB
EGAF00006773188 fastq.gz 3.4 GB
EGAF00006773189 fastq.gz 2.1 GB
EGAF00006773190 fastq.gz 2.2 GB
EGAF00006773191 fastq.gz 3.3 GB
EGAF00006773192 fastq.gz 3.5 GB
EGAF00006773193 gz 2.4 GB
EGAF00006773194 gz 2.6 GB
EGAF00006773195 gz 3.4 GB
EGAF00006773196 gz 3.8 GB
EGAF00006773197 gz 4.7 GB
EGAF00006773198 gz 5.4 GB
EGAF00006773199 gz 4.3 GB
EGAF00006773200 gz 4.8 GB
EGAF00006773201 fastq.gz 1.2 GB
EGAF00006773202 fastq.gz 1.4 GB
EGAF00006773203 fastq.gz 2.9 GB
EGAF00006773204 fastq.gz 3.2 GB
EGAF00006773205 fastq.gz 4.7 GB
EGAF00006773206 fastq.gz 5.3 GB
EGAF00006773207 fastq.gz 1.2 GB
EGAF00006773208 fastq.gz 1.4 GB
EGAF00006773209 fastq.gz 2.8 GB
EGAF00006773210 fastq.gz 3.1 GB
EGAF00006773211 fastq.gz 3.1 GB
EGAF00006773212 fastq.gz 3.4 GB
EGAF00006773213 fastq.gz 1.8 GB
EGAF00006773214 fastq.gz 2.0 GB
EGAF00006773215 fastq.gz 2.8 GB
EGAF00006773216 fastq.gz 2.9 GB
EGAF00006773217 fastq.gz 2.4 GB
EGAF00006773218 fastq.gz 2.5 GB
EGAF00006773219 fastq.gz 4.3 GB
EGAF00006773220 fastq.gz 4.9 GB
EGAF00006773221 fastq.gz 3.6 GB
EGAF00006773222 fastq.gz 4.1 GB
EGAF00006773223 fastq.gz 4.6 GB
EGAF00006773224 fastq.gz 4.9 GB
EGAF00006773225 fastq.gz 5.0 GB
EGAF00006773226 fastq.gz 5.9 GB
EGAF00006773227 fastq.gz 3.6 GB
EGAF00006773228 fastq.gz 4.1 GB
EGAF00006773229 fastq.gz 2.4 GB
EGAF00006773230 fastq.gz 2.7 GB
EGAF00006773231 fastq.gz 4.1 GB
EGAF00006773232 fastq.gz 4.4 GB
EGAF00006773233 fastq.gz 2.5 GB
EGAF00006773234 fastq.gz 2.8 GB
EGAF00006773235 fastq.gz 4.4 GB
EGAF00006773236 fastq.gz 5.2 GB
EGAF00006773237 fastq.gz 3.1 GB
EGAF00006773238 fastq.gz 3.7 GB
EGAF00006773239 fastq.gz 2.8 GB
EGAF00006773240 fastq.gz 3.4 GB
EGAF00006773241 fastq.gz 2.1 GB
EGAF00006773242 fastq.gz 2.3 GB
EGAF00006773243 fastq.gz 3.4 GB
EGAF00006773244 fastq.gz 4.2 GB
EGAF00006773245 fastq.gz 2.4 GB
EGAF00006773246 fastq.gz 3.0 GB
EGAF00006773247 fastq.gz 625.0 MB
EGAF00006773248 fastq.gz 734.9 MB
EGAF00006773249 fastq.gz 2.3 GB
EGAF00006773250 fastq.gz 2.6 GB
EGAF00006773251 fastq.gz 3.1 GB
EGAF00006773252 fastq.gz 3.4 GB
EGAF00006773253 fastq.gz 4.1 GB
EGAF00006773254 fastq.gz 4.6 GB
EGAF00006773255 fastq.gz 3.5 GB
EGAF00006773256 fastq.gz 4.1 GB
EGAF00006773257 fastq.gz 3.3 GB
EGAF00006773258 fastq.gz 3.9 GB
EGAF00006773259 fastq.gz 2.9 GB
EGAF00006773260 fastq.gz 3.1 GB
EGAF00006773261 fastq.gz 2.1 GB
EGAF00006773262 fastq.gz 2.4 GB
EGAF00006773263 fastq.gz 3.6 GB
EGAF00006773264 fastq.gz 4.3 GB
EGAF00006773265 fastq.gz 3.5 GB
EGAF00006773266 fastq.gz 3.9 GB
EGAF00006773267 fastq.gz 3.8 GB
EGAF00006773268 fastq.gz 4.0 GB
EGAF00006773269 fastq.gz 3.2 GB
EGAF00006773270 fastq.gz 3.8 GB
EGAF00006773271 fastq.gz 2.8 GB
EGAF00006773272 fastq.gz 3.2 GB
EGAF00006773273 fastq.gz 1.9 GB
EGAF00006773274 fastq.gz 2.1 GB
EGAF00006773275 fastq.gz 5.8 GB
EGAF00006773276 fastq.gz 5.9 GB
EGAF00006773277 fastq.gz 2.2 GB
EGAF00006773278 fastq.gz 2.3 GB
EGAF00006773279 fastq.gz 2.6 GB
EGAF00006773280 fastq.gz 2.9 GB
EGAF00006773281 fastq.gz 3.4 GB
EGAF00006773282 fastq.gz 3.7 GB
EGAF00006773283 fastq.gz 3.2 GB
EGAF00006773284 fastq.gz 3.5 GB
EGAF00006773285 fastq.gz 4.0 GB
EGAF00006773286 fastq.gz 4.9 GB
EGAF00006773287 fastq.gz 3.0 GB
EGAF00006773288 fastq.gz 3.3 GB
EGAF00006773289 fastq.gz 3.7 GB
EGAF00006773290 fastq.gz 4.2 GB
EGAF00006773291 fastq.gz 3.2 GB
EGAF00006773292 fastq.gz 3.5 GB
EGAF00006773293 fastq.gz 3.5 GB
EGAF00006773294 fastq.gz 3.9 GB
EGAF00006773295 fastq.gz 2.9 GB
EGAF00006773296 fastq.gz 3.1 GB
EGAF00006773297 fastq.gz 3.1 GB
EGAF00006773298 fastq.gz 3.4 GB
EGAF00006773299 fastq.gz 2.8 GB
EGAF00006773300 fastq.gz 3.1 GB
EGAF00006773301 fastq.gz 5.6 GB
EGAF00006773302 fastq.gz 6.3 GB
EGAF00006773303 gz 4.9 GB
EGAF00006773304 gz 5.4 GB
EGAF00006773305 gz 13.6 GB
EGAF00006773306 gz 14.5 GB
EGAF00006773307 gz 3.2 GB
EGAF00006773308 gz 3.4 GB
EGAF00006773309 fastq.gz 6.0 GB
EGAF00006773310 fastq.gz 6.5 GB
EGAF00006773311 fastq.gz 4.1 GB
EGAF00006773312 fastq.gz 4.2 GB
342 Files (1.2 TB)