Pulmonary atypical carcinoid multi-omic dataset on up to 42 tumours from same patient
Pulmonary atypical carcinoid. DNA WES and RNA-Seq on 42 tumour samples collected at autopsy, 10x Chromium linked read whole genome sequencing on four tumours plus one normal sample, and targeted DNA sequencing on two clinical biopsies and one blood plasma sample. Note – RNA-Seq dataset features complex batch effect attributable to tissue processing artefacts, as described in "Complex patterns of genomic heterogeneity identified in 42 tumor samples and ctDNA of a pulmonary atypical carcinoid patient" - Robb et al., 2022 and detailed in Supplementary Table S3. Note – RNA-Seq dataset features complex batch effect attributable to tissue processing artefacts, as described in "Complex patterns of genomic heterogeneity identified in 42 tumor samples and ctDNA of a pulmonary atypical carcinoid patient" - Robb et al., 2022 and detailed in Supplementary Table S3.
- 47 samples
- DAC: EGAC00001002828
- Technologies: HiSeq X Ten, Ion Torrent S5, NextSeq 500, unspecified
Data committee for NETwork! related sequencing/array data
The NETwork! Project (national study of neuroendocrine cancer) Data Access Committee Access to data generated by the NETwork! is available by emailing application to the data access committee and will be granted to qualified investigators for appropriate use. For further guidelines, application form and data access agreement, please follow the link below Contact Person: Cristin Print Email: c.print@auckland.ac.nz
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001006530 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.