Need Help?

Whole-genome sequencing of high-grade serous ovarian cancer (HGSC) tumours and matched normals from long-term survivors.

Whole-genome sequencing of high-grade serous ovarian cancer (HGSC) tumours and matched normals from long-term survivors performed as part of the Multidisciplinary Ovarian Cancer Outcomes Group (MOCOG) study. The dataset includes fastq files from 58 HGSC tumours (53 primary tumours and 5 recurrent tumours) and 53 matched normals from 53 long-term survivor patients. Sequence libraries were generated from tumour and matched normal genomic DNA using the KAPA HyperPrep PCR-free library preparation kit (Roche) according to manufacturer’s instructions. Sequencing was carried out by the Kinghorn Centre for Clinical Genomics Sequencing Laboratory (Sydney, Australia) on the HiSeq X Ten System (Illumina) to a minimum base coverage of 30-fold for normal DNA and 60-fold for tumour DNA samples.

Request Access

The Peter MacCallum Cancer Centre Research Data Access Committee (Peter Mac DAC) manages requests for Peter Mac human research data that requires restricted access.

The Peter Mac DAC terms: - Data sharing will be only for the purposes of health/medical research, and within the constraints of the original consent. - Requestors should be employees or enrolled students of a recognised academic, health service, commercial research or pharmaceutical institution. - Requestors must be able to demonstrate their ability to carry out the proposed use of the requested data. - Requestors must not have a conflict of interest that may potentially influence their interpretation of any analyses. - Requestors will enter into a data transfer agreement with Peter Mac. - Data may only be transferred to the requestors specified in the data transfer agreement, and must not be passed on to third parties. - Supplied data must only be used for the purpose described in the research proposal and the data transfer agreement. - All data provided to requestors will be de-identified and identifying data will not be made available. - Requestors must agree not to link the data provided with any other dataset without the permission of Peter Mac.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005984 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006826807 fastq.gz 39.1 GB
EGAF00006826808 fastq.gz 44.9 GB
EGAF00006826809 fastq.gz 39.6 GB
EGAF00006826810 fastq.gz 44.7 GB
EGAF00006826811 fastq.gz 38.4 GB
EGAF00006826812 fastq.gz 43.5 GB
EGAF00006826813 fastq.gz 39.9 GB
EGAF00006826814 fastq.gz 45.6 GB
EGAF00006826815 fastq.gz 39.6 GB
EGAF00006826816 fastq.gz 47.0 GB
EGAF00006826817 fastq.gz 39.4 GB
EGAF00006826818 fastq.gz 45.9 GB
EGAF00006826819 fastq.gz 38.9 GB
EGAF00006826820 fastq.gz 44.8 GB
EGAF00006826821 fastq.gz 37.7 GB
EGAF00006826822 fastq.gz 43.2 GB
EGAF00006826823 fastq.gz 39.1 GB
EGAF00006826824 fastq.gz 44.6 GB
EGAF00006826825 fastq.gz 39.2 GB
EGAF00006826826 fastq.gz 43.7 GB
EGAF00006826827 fastq.gz 39.2 GB
EGAF00006826828 fastq.gz 43.2 GB
EGAF00006826829 fastq.gz 37.5 GB
EGAF00006826830 fastq.gz 41.6 GB
EGAF00006826831 fastq.gz 41.7 GB
EGAF00006826832 fastq.gz 47.9 GB
EGAF00006826833 fastq.gz 42.4 GB
EGAF00006826834 fastq.gz 47.8 GB
EGAF00006826835 fastq.gz 43.3 GB
EGAF00006826836 fastq.gz 48.9 GB
EGAF00006826837 fastq.gz 42.1 GB
EGAF00006826838 fastq.gz 47.0 GB
EGAF00006826839 fastq.gz 42.5 GB
EGAF00006826840 fastq.gz 46.9 GB
EGAF00006826841 fastq.gz 41.6 GB
EGAF00006826842 fastq.gz 46.9 GB
EGAF00006826843 fastq.gz 42.4 GB
EGAF00006826844 fastq.gz 47.8 GB
EGAF00006826845 fastq.gz 41.5 GB
EGAF00006826846 fastq.gz 47.0 GB
EGAF00006826847 fastq.gz 37.0 GB
EGAF00006826848 fastq.gz 41.2 GB
EGAF00006826849 fastq.gz 40.1 GB
EGAF00006826850 fastq.gz 43.1 GB
EGAF00006826851 fastq.gz 39.1 GB
EGAF00006826852 fastq.gz 41.5 GB
EGAF00006826853 fastq.gz 38.9 GB
EGAF00006826854 fastq.gz 42.7 GB
EGAF00006826855 fastq.gz 39.9 GB
EGAF00006826856 fastq.gz 42.4 GB
EGAF00006826857 fastq.gz 39.3 GB
EGAF00006826858 fastq.gz 45.8 GB
EGAF00006826859 fastq.gz 38.5 GB
EGAF00006826860 fastq.gz 43.8 GB
EGAF00006826861 fastq.gz 38.6 GB
EGAF00006826862 fastq.gz 43.6 GB
EGAF00006826863 fastq.gz 38.0 GB
EGAF00006826864 fastq.gz 42.5 GB
EGAF00006826865 fastq.gz 36.8 GB
EGAF00006826866 fastq.gz 42.0 GB
EGAF00006826867 fastq.gz 38.0 GB
EGAF00006826868 fastq.gz 42.6 GB
EGAF00006826869 fastq.gz 38.4 GB
EGAF00006826870 fastq.gz 43.2 GB
EGAF00006826871 fastq.gz 37.1 GB
EGAF00006826872 fastq.gz 41.3 GB
EGAF00006826873 fastq.gz 37.7 GB
EGAF00006826874 fastq.gz 42.9 GB
EGAF00006826875 fastq.gz 38.3 GB
EGAF00006826876 fastq.gz 43.3 GB
EGAF00006826877 fastq.gz 38.6 GB
EGAF00006826878 fastq.gz 43.9 GB
EGAF00006826879 fastq.gz 38.0 GB
EGAF00006826880 fastq.gz 42.2 GB
EGAF00006826881 fastq.gz 37.9 GB
EGAF00006826882 fastq.gz 43.0 GB
EGAF00006826883 fastq.gz 38.7 GB
EGAF00006826884 fastq.gz 43.2 GB
EGAF00006826885 fastq.gz 38.7 GB
EGAF00006826886 fastq.gz 43.5 GB
EGAF00006826887 fastq.gz 37.9 GB
EGAF00006826888 fastq.gz 42.8 GB
EGAF00006826889 fastq.gz 37.9 GB
EGAF00006826890 fastq.gz 43.3 GB
EGAF00006826891 fastq.gz 38.3 GB
EGAF00006826892 fastq.gz 43.1 GB
EGAF00006826893 fastq.gz 38.7 GB
EGAF00006826894 fastq.gz 43.9 GB
EGAF00006826895 fastq.gz 38.3 GB
EGAF00006826896 fastq.gz 43.1 GB
EGAF00006826897 fastq.gz 38.3 GB
EGAF00006826898 fastq.gz 43.9 GB
EGAF00006826899 fastq.gz 38.3 GB
EGAF00006826900 fastq.gz 42.9 GB
EGAF00006826901 fastq.gz 38.3 GB
EGAF00006826902 fastq.gz 42.7 GB
EGAF00006826903 fastq.gz 37.7 GB
EGAF00006826904 fastq.gz 42.6 GB
EGAF00006826905 fastq.gz 39.5 GB
EGAF00006826906 fastq.gz 46.0 GB
EGAF00006826907 fastq.gz 38.9 GB
EGAF00006826908 fastq.gz 45.2 GB
EGAF00006826909 fastq.gz 38.7 GB
EGAF00006826910 fastq.gz 44.9 GB
EGAF00006826911 fastq.gz 38.5 GB
EGAF00006826912 fastq.gz 44.2 GB
EGAF00006826913 fastq.gz 38.8 GB
EGAF00006826914 fastq.gz 45.4 GB
EGAF00006826915 fastq.gz 36.7 GB
EGAF00006826916 fastq.gz 42.1 GB
EGAF00006826917 fastq.gz 36.5 GB
EGAF00006826918 fastq.gz 41.8 GB
EGAF00006826919 fastq.gz 35.9 GB
EGAF00006826920 fastq.gz 40.3 GB
EGAF00006826921 fastq.gz 35.7 GB
EGAF00006826922 fastq.gz 40.4 GB
EGAF00006826923 fastq.gz 34.8 GB
EGAF00006826924 fastq.gz 39.5 GB
EGAF00006826925 fastq.gz 37.4 GB
EGAF00006826926 fastq.gz 42.3 GB
EGAF00006826927 fastq.gz 35.7 GB
EGAF00006826928 fastq.gz 40.3 GB
EGAF00006826929 fastq.gz 35.6 GB
EGAF00006826930 fastq.gz 41.4 GB
EGAF00006826931 fastq.gz 36.8 GB
EGAF00006826932 fastq.gz 41.0 GB
EGAF00006826933 fastq.gz 36.8 GB
EGAF00006826934 fastq.gz 41.0 GB
EGAF00006826935 fastq.gz 36.8 GB
EGAF00006826936 fastq.gz 40.8 GB
EGAF00006826937 fastq.gz 34.2 GB
EGAF00006826938 fastq.gz 37.4 GB
EGAF00006826939 fastq.gz 36.5 GB
EGAF00006826940 fastq.gz 40.2 GB
EGAF00006826941 fastq.gz 36.2 GB
EGAF00006826942 fastq.gz 39.8 GB
EGAF00006826943 fastq.gz 36.2 GB
EGAF00006826944 fastq.gz 40.1 GB
EGAF00006826945 fastq.gz 34.4 GB
EGAF00006826946 fastq.gz 38.0 GB
EGAF00006826947 fastq.gz 36.3 GB
EGAF00006826948 fastq.gz 40.5 GB
EGAF00006826949 fastq.gz 37.2 GB
EGAF00006826950 fastq.gz 41.3 GB
EGAF00006826951 fastq.gz 37.9 GB
EGAF00006826952 fastq.gz 42.3 GB
EGAF00006826953 fastq.gz 38.1 GB
EGAF00006826954 fastq.gz 42.6 GB
EGAF00006826955 fastq.gz 36.9 GB
EGAF00006826956 fastq.gz 40.9 GB
EGAF00006826957 fastq.gz 37.7 GB
EGAF00006826958 fastq.gz 42.0 GB
EGAF00006826959 fastq.gz 35.9 GB
EGAF00006826960 fastq.gz 39.8 GB
EGAF00006826961 fastq.gz 39.4 GB
EGAF00006826962 fastq.gz 45.0 GB
EGAF00006826963 fastq.gz 36.6 GB
EGAF00006826964 fastq.gz 42.1 GB
EGAF00006826965 fastq.gz 37.3 GB
EGAF00006826966 fastq.gz 42.7 GB
EGAF00006826967 fastq.gz 36.1 GB
EGAF00006826968 fastq.gz 41.0 GB
EGAF00006826969 fastq.gz 36.7 GB
EGAF00006826970 fastq.gz 41.7 GB
EGAF00006826971 fastq.gz 36.9 GB
EGAF00006826972 fastq.gz 41.6 GB
EGAF00006826973 fastq.gz 37.6 GB
EGAF00006826974 fastq.gz 42.7 GB
EGAF00006826975 fastq.gz 35.6 GB
EGAF00006826976 fastq.gz 40.2 GB
EGAF00006826977 fastq.gz 37.5 GB
EGAF00006826978 fastq.gz 42.3 GB
EGAF00006826979 fastq.gz 37.5 GB
EGAF00006826980 fastq.gz 43.2 GB
EGAF00006826981 fastq.gz 39.0 GB
EGAF00006826982 fastq.gz 44.3 GB
EGAF00006826983 fastq.gz 39.1 GB
EGAF00006826984 fastq.gz 44.2 GB
EGAF00006826985 fastq.gz 39.0 GB
EGAF00006826986 fastq.gz 43.2 GB
EGAF00006826987 fastq.gz 40.6 GB
EGAF00006826988 fastq.gz 45.2 GB
EGAF00006826989 fastq.gz 39.7 GB
EGAF00006826990 fastq.gz 44.7 GB
EGAF00006826991 fastq.gz 40.5 GB
EGAF00006826992 fastq.gz 45.7 GB
EGAF00006826993 fastq.gz 36.8 GB
EGAF00006826994 fastq.gz 40.5 GB
EGAF00006826995 fastq.gz 37.4 GB
EGAF00006826996 fastq.gz 42.5 GB
EGAF00006826997 fastq.gz 39.1 GB
EGAF00006826998 fastq.gz 45.1 GB
EGAF00006826999 fastq.gz 36.5 GB
EGAF00006827000 fastq.gz 42.5 GB
EGAF00006827001 fastq.gz 36.4 GB
EGAF00006827002 fastq.gz 42.2 GB
EGAF00006827003 fastq.gz 37.0 GB
EGAF00006827004 fastq.gz 43.0 GB
EGAF00006827005 fastq.gz 36.7 GB
EGAF00006827006 fastq.gz 42.3 GB
EGAF00006827007 fastq.gz 35.4 GB
EGAF00006827008 fastq.gz 40.5 GB
EGAF00006827009 fastq.gz 34.9 GB
EGAF00006827010 fastq.gz 40.0 GB
EGAF00006827011 fastq.gz 36.1 GB
EGAF00006827012 fastq.gz 42.0 GB
EGAF00006827013 fastq.gz 35.7 GB
EGAF00006827014 fastq.gz 41.7 GB
EGAF00006827015 fastq.gz 36.9 GB
EGAF00006827016 fastq.gz 41.3 GB
EGAF00006827017 fastq.gz 37.4 GB
EGAF00006827018 fastq.gz 41.9 GB
EGAF00006827019 fastq.gz 36.2 GB
EGAF00006827020 fastq.gz 40.2 GB
EGAF00006827021 fastq.gz 37.4 GB
EGAF00006827022 fastq.gz 42.0 GB
EGAF00006827023 fastq.gz 35.6 GB
EGAF00006827024 fastq.gz 40.1 GB
EGAF00006827025 fastq.gz 37.6 GB
EGAF00006827026 fastq.gz 42.4 GB
EGAF00006827027 fastq.gz 40.3 GB
EGAF00006827028 fastq.gz 45.1 GB
EGAF00006827029 fastq.gz 38.6 GB
EGAF00006827030 fastq.gz 42.7 GB
EGAF00006827031 fastq.gz 41.0 GB
EGAF00006827032 fastq.gz 45.7 GB
EGAF00006827033 fastq.gz 40.3 GB
EGAF00006827034 fastq.gz 44.8 GB
EGAF00006827035 fastq.gz 39.1 GB
EGAF00006827036 fastq.gz 42.1 GB
EGAF00006827037 fastq.gz 40.6 GB
EGAF00006827038 fastq.gz 44.2 GB
EGAF00006827039 fastq.gz 37.7 GB
EGAF00006827040 fastq.gz 41.0 GB
EGAF00006827041 fastq.gz 38.7 GB
EGAF00006827042 fastq.gz 42.2 GB
EGAF00006827043 fastq.gz 38.5 GB
EGAF00006827044 fastq.gz 42.7 GB
EGAF00006827045 fastq.gz 38.2 GB
EGAF00006827046 fastq.gz 41.9 GB
EGAF00006827047 fastq.gz 38.6 GB
EGAF00006827048 fastq.gz 41.9 GB
EGAF00006827049 fastq.gz 37.6 GB
EGAF00006827050 fastq.gz 41.1 GB
EGAF00006827051 fastq.gz 38.5 GB
EGAF00006827052 fastq.gz 42.8 GB
EGAF00006827053 fastq.gz 39.6 GB
EGAF00006827054 fastq.gz 44.3 GB
EGAF00006827055 fastq.gz 37.8 GB
EGAF00006827056 fastq.gz 42.3 GB
EGAF00006827057 fastq.gz 38.8 GB
EGAF00006827058 fastq.gz 43.6 GB
EGAF00006827059 fastq.gz 36.6 GB
EGAF00006827060 fastq.gz 40.2 GB
EGAF00006827061 fastq.gz 36.4 GB
EGAF00006827062 fastq.gz 40.2 GB
EGAF00006827063 fastq.gz 39.5 GB
EGAF00006827064 fastq.gz 43.5 GB
EGAF00006827065 fastq.gz 38.7 GB
EGAF00006827066 fastq.gz 42.8 GB
EGAF00006827067 fastq.gz 39.1 GB
EGAF00006827068 fastq.gz 42.3 GB
EGAF00006827069 fastq.gz 37.7 GB
EGAF00006827070 fastq.gz 41.0 GB
EGAF00006827071 fastq.gz 38.9 GB
EGAF00006827072 fastq.gz 43.3 GB
EGAF00006827073 fastq.gz 39.1 GB
EGAF00006827074 fastq.gz 43.7 GB
EGAF00006827075 fastq.gz 38.5 GB
EGAF00006827076 fastq.gz 43.0 GB
EGAF00006827077 fastq.gz 39.2 GB
EGAF00006827078 fastq.gz 44.8 GB
EGAF00006827079 fastq.gz 37.4 GB
EGAF00006827080 fastq.gz 41.1 GB
EGAF00006827081 fastq.gz 40.5 GB
EGAF00006827082 fastq.gz 45.9 GB
EGAF00006827083 fastq.gz 41.1 GB
EGAF00006827084 fastq.gz 47.0 GB
EGAF00006827085 fastq.gz 34.3 GB
EGAF00006827086 fastq.gz 37.7 GB
EGAF00006827087 fastq.gz 34.0 GB
EGAF00006827088 fastq.gz 37.1 GB
EGAF00006827089 fastq.gz 28.5 GB
EGAF00006827090 fastq.gz 29.5 GB
EGAF00006827091 fastq.gz 35.4 GB
EGAF00006827092 fastq.gz 38.1 GB
EGAF00006827093 fastq.gz 35.5 GB
EGAF00006827094 fastq.gz 38.2 GB
EGAF00006827095 fastq.gz 34.2 GB
EGAF00006827096 fastq.gz 36.7 GB
EGAF00006827097 fastq.gz 34.7 GB
EGAF00006827098 fastq.gz 37.2 GB
EGAF00006827099 fastq.gz 36.6 GB
EGAF00006827100 fastq.gz 40.2 GB
EGAF00006827101 fastq.gz 34.4 GB
EGAF00006827102 fastq.gz 37.8 GB
EGAF00006827103 fastq.gz 37.3 GB
EGAF00006827104 fastq.gz 41.2 GB
EGAF00006827105 fastq.gz 34.4 GB
EGAF00006827106 fastq.gz 38.0 GB
EGAF00006827107 fastq.gz 39.1 GB
EGAF00006827108 fastq.gz 43.2 GB
EGAF00006827109 fastq.gz 39.7 GB
EGAF00006827110 fastq.gz 44.2 GB
EGAF00006827111 fastq.gz 38.6 GB
EGAF00006827112 fastq.gz 42.8 GB
EGAF00006827113 fastq.gz 39.2 GB
EGAF00006827114 fastq.gz 43.5 GB
EGAF00006827115 fastq.gz 38.5 GB
EGAF00006827116 fastq.gz 42.5 GB
EGAF00006827117 fastq.gz 36.9 GB
EGAF00006827118 fastq.gz 40.5 GB
EGAF00006827119 fastq.gz 36.5 GB
EGAF00006827120 fastq.gz 40.0 GB
EGAF00006868022 fastq.gz 34.8 GB
EGAF00006868023 fastq.gz 38.0 GB
EGAF00006868024 fastq.gz 29.2 GB
EGAF00006868025 fastq.gz 30.7 GB
EGAF00006868026 fastq.gz 35.0 GB
EGAF00006868027 fastq.gz 38.3 GB
EGAF00006868028 fastq.gz 35.5 GB
EGAF00006868029 fastq.gz 39.0 GB
EGAF00006868030 fastq.gz 34.3 GB
EGAF00006868031 fastq.gz 37.4 GB
EGAF00006868032 fastq.gz 41.7 GB
EGAF00006868033 fastq.gz 47.5 GB
EGAF00006868034 fastq.gz 41.6 GB
EGAF00006868035 fastq.gz 47.5 GB
EGAF00006868036 fastq.gz 39.7 GB
EGAF00006868037 fastq.gz 44.3 GB
EGAF00006868038 fastq.gz 39.9 GB
EGAF00006868039 fastq.gz 45.3 GB
EGAF00006868040 fastq.gz 36.6 GB
EGAF00006868041 fastq.gz 40.6 GB
EGAF00006868042 fastq.gz 40.5 GB
EGAF00006868043 fastq.gz 46.8 GB
EGAF00006868044 fastq.gz 41.0 GB
EGAF00006868045 fastq.gz 47.5 GB
EGAF00006930255 fastq.gz 38.5 GB
EGAF00006930256 fastq.gz 43.2 GB
340 Files (13.7 TB)