About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WGS of tumor and blood control samples of neuroblastoma

high coverage whole genome sequencing of 38 samples was done on a patterned flowcell v.2.5 (150 bp paired end, HiSeq X Ten) with coverage of about 60x for the tumor and whole blood control samples. All tumors had a tumor cell content of ≥60%. Sequencing libraries were prepared using the Truseq DNA Nano kit (Illumina) according to the manufacturers’ instructions and size selected using SPRI beads (Beckman Coulter Genomics).

Request Access

DUO:0000026
version: 2019-01-07

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006533 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007249811 fastq.gz 39.8 GB Report
EGAF00007249812 fastq.gz 48.6 GB Report
EGAF00007249813 fastq.gz 38.7 GB Report
EGAF00007249814 fastq.gz 45.8 GB Report
EGAF00007249815 fastq.gz 38.6 GB Report
EGAF00007249816 fastq.gz 42.0 GB Report
EGAF00007249817 fastq.gz 37.5 GB Report
EGAF00007249818 fastq.gz 42.4 GB Report
EGAF00007249819 fastq.gz 38.6 GB Report
EGAF00007249820 fastq.gz 44.2 GB Report
EGAF00007249821 fastq.gz 38.2 GB Report
EGAF00007249822 fastq.gz 44.6 GB Report
EGAF00007249823 fastq.gz 38.9 GB Report
EGAF00007249824 fastq.gz 41.7 GB Report
EGAF00007249825 fastq.gz 46.4 GB Report
EGAF00007249826 fastq.gz 45.1 GB Report
EGAF00007249827 fastq.gz 36.6 GB Report
EGAF00007249828 fastq.gz 40.6 GB Report
EGAF00007249829 fastq.gz 36.4 GB Report
EGAF00007249830 fastq.gz 39.7 GB Report
EGAF00007249831 fastq.gz 39.0 GB Report
EGAF00007249832 fastq.gz 42.0 GB Report
EGAF00007249833 fastq.gz 39.3 GB Report
EGAF00007249834 fastq.gz 42.6 GB Report
EGAF00007249835 fastq.gz 38.2 GB Report
EGAF00007249836 fastq.gz 41.9 GB Report
EGAF00007249837 fastq.gz 36.8 GB Report
EGAF00007249838 fastq.gz 40.7 GB Report
EGAF00007249839 fastq.gz 40.9 GB Report
EGAF00007249840 fastq.gz 43.7 GB Report
EGAF00007249841 fastq.gz 39.5 GB Report
EGAF00007249842 fastq.gz 43.4 GB Report
EGAF00007249843 fastq.gz 39.6 GB Report
EGAF00007249844 fastq.gz 42.1 GB Report
EGAF00007249845 fastq.gz 39.2 GB Report
EGAF00007249846 fastq.gz 42.0 GB Report
EGAF00007249847 fastq.gz 41.0 GB Report
EGAF00007249848 fastq.gz 43.6 GB Report
EGAF00007249849 fastq.gz 39.3 GB Report
EGAF00007249850 fastq.gz 43.6 GB Report
EGAF00007249851 fastq.gz 38.6 GB Report
EGAF00007249852 fastq.gz 43.5 GB Report
EGAF00007249853 fastq.gz 39.1 GB Report
EGAF00007249854 fastq.gz 42.1 GB Report
EGAF00007249855 fastq.gz 40.0 GB Report
EGAF00007249856 fastq.gz 42.9 GB Report
EGAF00007249857 fastq.gz 41.4 GB Report
EGAF00007249858 fastq.gz 45.8 GB Report
EGAF00007249859 fastq.gz 41.3 GB Report
EGAF00007249860 fastq.gz 44.2 GB Report
EGAF00007249861 fastq.gz 37.0 GB Report
EGAF00007249862 fastq.gz 40.9 GB Report
EGAF00007249863 fastq.gz 37.3 GB Report
EGAF00007249864 fastq.gz 41.5 GB Report
EGAF00007249865 fastq.gz 38.8 GB Report
EGAF00007249866 fastq.gz 40.7 GB Report
EGAF00007249867 fastq.gz 38.7 GB Report
EGAF00007249868 fastq.gz 40.1 GB Report
EGAF00007249869 fastq.gz 39.6 GB Report
EGAF00007249870 fastq.gz 42.4 GB Report
EGAF00007249871 fastq.gz 40.6 GB Report
EGAF00007249872 fastq.gz 43.5 GB Report
EGAF00007249873 fastq.gz 41.1 GB Report
EGAF00007249874 fastq.gz 43.9 GB Report
EGAF00007249875 fastq.gz 41.2 GB Report
EGAF00007249876 fastq.gz 44.3 GB Report
EGAF00007249877 fastq.gz 39.7 GB Report
EGAF00007249878 fastq.gz 46.6 GB Report
EGAF00007249879 fastq.gz 37.0 GB Report
EGAF00007249880 fastq.gz 40.1 GB Report
EGAF00007249881 fastq.gz 39.7 GB Report
EGAF00007249882 fastq.gz 44.4 GB Report
EGAF00007249883 fastq.gz 39.4 GB Report
EGAF00007249884 fastq.gz 42.7 GB Report
EGAF00007256293 fastq.gz 41.1 GB Report
EGAF00007256294 fastq.gz 43.6 GB Report
EGAF00007256295 fastq.gz 39.4 GB Report
EGAF00007256296 fastq.gz 46.4 GB Report
EGAF00007256297 fastq.gz 37.5 GB Report
EGAF00007256298 fastq.gz 41.5 GB Report
EGAF00007256299 fastq.gz 40.4 GB Report
EGAF00007256300 fastq.gz 42.2 GB Report
EGAF00007256301 fastq.gz 41.1 GB Report
EGAF00007256302 fastq.gz 43.5 GB Report
EGAF00007256303 fastq.gz 41.0 GB Report
EGAF00007256304 fastq.gz 43.5 GB Report
EGAF00007256305 fastq.gz 41.6 GB Report
EGAF00007256306 fastq.gz 43.9 GB Report
EGAF00007256307 fastq.gz 41.6 GB Report
EGAF00007256308 fastq.gz 44.0 GB Report
EGAF00007256309 fastq.gz 41.0 GB Report
EGAF00007256310 fastq.gz 45.6 GB Report
EGAF00007256311 fastq.gz 41.4 GB Report
EGAF00007256312 fastq.gz 45.3 GB Report
EGAF00007256313 fastq.gz 42.4 GB Report
EGAF00007256314 fastq.gz 42.8 GB Report
EGAF00007256315 fastq.gz 42.2 GB Report
EGAF00007256316 fastq.gz 42.9 GB Report
EGAF00007256317 fastq.gz 37.9 GB Report
EGAF00007256318 fastq.gz 41.4 GB Report
EGAF00007256319 fastq.gz 38.2 GB Report
EGAF00007256320 fastq.gz 42.0 GB Report
EGAF00007256321 fastq.gz 38.7 GB Report
EGAF00007256322 fastq.gz 43.2 GB Report
EGAF00007256323 fastq.gz 38.6 GB Report
EGAF00007256324 fastq.gz 43.5 GB Report
EGAF00007256325 fastq.gz 41.2 GB Report
EGAF00007256326 fastq.gz 44.5 GB Report
EGAF00007256327 fastq.gz 39.2 GB Report
EGAF00007256328 fastq.gz 42.6 GB Report
EGAF00007256329 fastq.gz 40.7 GB Report
EGAF00007256330 fastq.gz 42.7 GB Report
EGAF00007256331 fastq.gz 37.5 GB Report
EGAF00007256332 fastq.gz 41.3 GB Report
EGAF00007256333 fastq.gz 37.2 GB Report
EGAF00007256334 fastq.gz 41.3 GB Report
EGAF00007256335 fastq.gz 35.8 GB Report
EGAF00007256336 fastq.gz 40.3 GB Report
EGAF00007256337 fastq.gz 35.8 GB Report
EGAF00007256338 fastq.gz 39.9 GB Report
EGAF00007256339 fastq.gz 40.5 GB Report
EGAF00007256340 fastq.gz 42.6 GB Report
EGAF00007256341 fastq.gz 40.7 GB Report
EGAF00007256342 fastq.gz 42.3 GB Report
EGAF00007256343 fastq.gz 39.0 GB Report
EGAF00007256344 fastq.gz 41.3 GB Report
EGAF00007256345 fastq.gz 39.0 GB Report
EGAF00007256346 fastq.gz 41.3 GB Report
EGAF00007256347 fastq.gz 40.8 GB Report
EGAF00007256348 fastq.gz 44.7 GB Report
EGAF00007256349 fastq.gz 35.5 GB Report
EGAF00007256350 fastq.gz 39.3 GB Report
EGAF00007256351 fastq.gz 35.8 GB Report
EGAF00007256352 fastq.gz 39.6 GB Report
EGAF00007256353 fastq.gz 40.5 GB Report
EGAF00007256354 fastq.gz 44.5 GB Report
EGAF00007256355 fastq.gz 40.7 GB Report
EGAF00007256356 fastq.gz 44.4 GB Report
EGAF00007256357 fastq.gz 37.5 GB Report
EGAF00007256358 fastq.gz 41.5 GB Report
EGAF00007256359 fastq.gz 37.6 GB Report
EGAF00007256360 fastq.gz 41.9 GB Report
EGAF00007256361 fastq.gz 40.1 GB Report
EGAF00007256362 fastq.gz 41.6 GB Report
EGAF00007256363 fastq.gz 40.5 GB Report
EGAF00007256364 fastq.gz 41.8 GB Report
EGAF00007256365 fastq.gz 39.2 GB Report
EGAF00007256366 fastq.gz 40.9 GB Report
EGAF00007266543 fastq.gz 41.3 GB Report
EGAF00007266544 fastq.gz 42.2 GB Report
EGAF00007266545 fastq.gz 40.7 GB Report
EGAF00007266546 fastq.gz 45.5 GB Report
152 Files (6.2 TB)