About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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bulk RNA-Seq samples of CRC patients

The dataset contains samples of 30 CRC patients (3 samples for each patient, tumor and 2 normal adjacent tissue sites, 90 samples in total). Dataset is composed by fastq file (paired end) type from bulk RNA-Seq.

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Personal Data Protection

The Istituto Europeo Oncologico's Data Access Policy is an established control put in place to ensure that data protection requirements are followed. It ensures that personally identifiable information in data made available in the IEO is kept from unauthorized users. IEO access control policies are in accordance with art. 13 General Regulation on Data Protection (EU Regulation 2016/679). The IEO requires that users obtain authorization from the Personal Data Protection Manager for accessing controlled data. Decisions to grant access are made based on whether the request conforms to the specifications within the EU and IEO's Data Sharing Policy and program specific requirements or procedures (if any). Investigators who download unrestricted-access data should: - not attempt to identify individual human research participants from whom the data were obtained - acknowledge in all oral or written presentations, disclosures, or publications the specific dataset(s) or applicable accession number(s) and the data repositories through which the investigator accessed any data.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006666 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007266283 fastq.gz 6.9 GB Report
EGAF00007266284 fastq.gz 6.9 GB Report
EGAF00007266285 fastq.gz 8.0 GB Report
EGAF00007266286 fastq.gz 8.0 GB Report
EGAF00007266287 fastq.gz 7.7 GB Report
EGAF00007266288 fastq.gz 7.7 GB Report
EGAF00007266289 fastq.gz 7.2 GB Report
EGAF00007266290 fastq.gz 7.2 GB Report
EGAF00007266291 fastq.gz 7.2 GB Report
EGAF00007266292 fastq.gz 7.2 GB Report
EGAF00007266293 fastq.gz 6.1 GB Report
EGAF00007266294 fastq.gz 6.1 GB Report
EGAF00007266295 fastq.gz 7.9 GB Report
EGAF00007266296 fastq.gz 7.9 GB Report
EGAF00007266297 fastq.gz 8.0 GB Report
EGAF00007266298 fastq.gz 8.0 GB Report
EGAF00007266299 fastq.gz 8.4 GB Report
EGAF00007266300 fastq.gz 8.4 GB Report
EGAF00007266301 fastq.gz 7.1 GB Report
EGAF00007266302 fastq.gz 7.1 GB Report
EGAF00007266303 fastq.gz 9.1 GB Report
EGAF00007266304 fastq.gz 9.1 GB Report
EGAF00007266305 fastq.gz 7.0 GB Report
EGAF00007266306 fastq.gz 7.0 GB Report
EGAF00007266307 fastq.gz 7.8 GB Report
EGAF00007266308 fastq.gz 7.8 GB Report
EGAF00007266309 fastq.gz 8.5 GB Report
EGAF00007266310 fastq.gz 8.5 GB Report
EGAF00007266311 fastq.gz 6.3 GB Report
EGAF00007266312 fastq.gz 6.3 GB Report
EGAF00007266313 fastq.gz 7.4 GB Report
EGAF00007266314 fastq.gz 7.4 GB Report
EGAF00007266315 fastq.gz 10.2 GB Report
EGAF00007266316 fastq.gz 10.2 GB Report
EGAF00007266317 fastq.gz 7.7 GB Report
EGAF00007266318 fastq.gz 7.7 GB Report
EGAF00007266319 fastq.gz 7.0 GB Report
EGAF00007266320 fastq.gz 7.0 GB Report
EGAF00007266321 fastq.gz 8.0 GB Report
EGAF00007266322 fastq.gz 8.0 GB Report
EGAF00007266323 fastq.gz 8.8 GB Report
EGAF00007266324 fastq.gz 8.8 GB Report
EGAF00007266325 fastq.gz 7.7 GB Report
EGAF00007266326 fastq.gz 7.7 GB Report
EGAF00007266327 fastq.gz 6.7 GB Report
EGAF00007266328 fastq.gz 6.7 GB Report
EGAF00007266329 fastq.gz 7.6 GB Report
EGAF00007266330 fastq.gz 7.6 GB Report
EGAF00007266331 fastq.gz 8.6 GB Report
EGAF00007266332 fastq.gz 8.6 GB Report
EGAF00007266333 fastq.gz 10.3 GB Report
EGAF00007266334 fastq.gz 10.3 GB Report
EGAF00007266335 fastq.gz 9.4 MB Report
EGAF00007266336 fastq.gz 9.4 MB Report
EGAF00007266337 fq.gz 1.3 GB Report
EGAF00007266338 fq.gz 1.3 GB Report
EGAF00007266339 fq.gz 1.3 GB Report
EGAF00007266340 fq.gz 1.3 GB Report
EGAF00007266341 fq.gz 1.2 GB Report
EGAF00007266342 fq.gz 1.2 GB Report
EGAF00007266343 fq.gz 1.3 GB Report
EGAF00007266344 fq.gz 1.3 GB Report
EGAF00007266345 fq.gz 1.1 GB Report
EGAF00007266346 fq.gz 1.1 GB Report
EGAF00007266347 fq.gz 1.2 GB Report
EGAF00007266348 fq.gz 1.2 GB Report
EGAF00007266349 fq.gz 1.2 GB Report
EGAF00007266350 fq.gz 1.2 GB Report
EGAF00007266351 fq.gz 988.3 MB Report
EGAF00007266352 fq.gz 963.3 MB Report
EGAF00007266353 fq.gz 1.2 GB Report
EGAF00007266354 fq.gz 1.3 GB Report
EGAF00007266355 fq.gz 1.1 GB Report
EGAF00007266356 fq.gz 1.2 GB Report
EGAF00007266357 fq.gz 1.3 GB Report
EGAF00007266358 fq.gz 1.3 GB Report
EGAF00007266359 fq.gz 1.3 GB Report
EGAF00007266360 fq.gz 1.3 GB Report
EGAF00007266361 fq.gz 1.2 GB Report
EGAF00007266362 fq.gz 1.2 GB Report
EGAF00007266363 fq.gz 1.5 GB Report
EGAF00007266364 fq.gz 1.6 GB Report
EGAF00007266365 fq.gz 1.3 GB Report
EGAF00007266366 fq.gz 1.3 GB Report
EGAF00007266367 fq.gz 1.2 GB Report
EGAF00007266368 fq.gz 1.2 GB Report
EGAF00007266369 fq.gz 757.1 MB Report
EGAF00007266370 fq.gz 791.6 MB Report
EGAF00007266371 fq.gz 758.3 MB Report
EGAF00007266372 fq.gz 791.9 MB Report
EGAF00007266373 fq.gz 2.4 GB Report
EGAF00007266374 fq.gz 2.5 GB Report
EGAF00007266375 fq.gz 1.3 GB Report
EGAF00007266376 fq.gz 1.3 GB Report
EGAF00007266377 fq.gz 1.0 GB Report
EGAF00007266378 fq.gz 1.0 GB Report
EGAF00007266379 fq.gz 1.4 GB Report
EGAF00007266380 fq.gz 1.5 GB Report
EGAF00007266381 fq.gz 2.7 GB Report
EGAF00007266382 fq.gz 2.8 GB Report
EGAF00007266383 fq.gz 1.3 GB Report
EGAF00007266384 fq.gz 1.4 GB Report
EGAF00007266385 fq.gz 1.9 GB Report
EGAF00007266386 fq.gz 1.9 GB Report
EGAF00007266387 fq.gz 1.2 GB Report
EGAF00007266388 fq.gz 1.2 GB Report
EGAF00007266389 fq.gz 1.1 GB Report
EGAF00007266390 fq.gz 1.1 GB Report
EGAF00007266391 fq.gz 1.5 GB Report
EGAF00007266392 fq.gz 1.6 GB Report
EGAF00007266393 fq.gz 1.2 GB Report
EGAF00007266394 fq.gz 1.2 GB Report
EGAF00007266395 fq.gz 1.5 GB Report
EGAF00007266396 fq.gz 1.6 GB Report
EGAF00007266397 fq.gz 1.4 GB Report
EGAF00007266398 fq.gz 1.5 GB Report
EGAF00007266399 fq.gz 1.3 GB Report
EGAF00007266400 fq.gz 1.3 GB Report
EGAF00007266401 fq.gz 869.8 MB Report
EGAF00007266402 fq.gz 903.2 MB Report
EGAF00007266403 fq.gz 1.8 GB Report
EGAF00007266404 fq.gz 1.8 GB Report
EGAF00007266405 fq.gz 1.2 GB Report
EGAF00007266406 fq.gz 1.2 GB Report
EGAF00007266407 fq.gz 3.0 GB Report
EGAF00007266408 fq.gz 3.0 GB Report
EGAF00007266409 fq.gz 1.3 GB Report
EGAF00007266410 fq.gz 1.3 GB Report
EGAF00007266411 fq.gz 1.7 GB Report
EGAF00007266412 fq.gz 1.7 GB Report
EGAF00007266413 fq.gz 855.8 MB Report
EGAF00007266414 fq.gz 824.6 MB Report
EGAF00007266415 fq.gz 1.3 GB Report
EGAF00007266416 fq.gz 1.3 GB Report
EGAF00007266417 fq.gz 1.2 GB Report
EGAF00007266418 fq.gz 1.2 GB Report
EGAF00007266419 fq.gz 1.6 GB Report
EGAF00007266420 fq.gz 1.6 GB Report
EGAF00007266421 fq.gz 702.9 MB Report
EGAF00007266422 fq.gz 742.3 MB Report
EGAF00007266423 fq.gz 1.6 GB Report
EGAF00007266424 fq.gz 1.6 GB Report
EGAF00007266425 fq.gz 1.6 GB Report
EGAF00007266426 fq.gz 1.7 GB Report
EGAF00007266427 fq.gz 2.0 GB Report
EGAF00007266428 fq.gz 2.1 GB Report
EGAF00007266429 fq.gz 2.3 GB Report
EGAF00007266430 fq.gz 2.4 GB Report
EGAF00007266431 fq.gz 2.5 GB Report
EGAF00007266432 fq.gz 2.5 GB Report
EGAF00007266433 fq.gz 1.7 GB Report
EGAF00007266434 fq.gz 1.8 GB Report
EGAF00007266435 fq.gz 1.7 GB Report
EGAF00007266436 fq.gz 1.8 GB Report
EGAF00007266437 fq.gz 2.1 GB Report
EGAF00007266438 fq.gz 2.2 GB Report
EGAF00007266439 fq.gz 2.3 GB Report
EGAF00007266440 fq.gz 2.4 GB Report
EGAF00007266441 fq.gz 2.4 GB Report
EGAF00007266442 fq.gz 2.6 GB Report
EGAF00007266443 fq.gz 2.0 GB Report
EGAF00007266444 fq.gz 2.2 GB Report
EGAF00007266445 fq.gz 1.8 GB Report
EGAF00007266446 fq.gz 1.8 GB Report
EGAF00007266447 fq.gz 1.9 GB Report
EGAF00007266448 fq.gz 2.0 GB Report
EGAF00007266449 fq.gz 1.5 GB Report
EGAF00007266450 fq.gz 1.5 GB Report
EGAF00007273142 fastq.gz 6.8 GB Report
EGAF00007273143 fastq.gz 6.8 GB Report
EGAF00007273144 fastq.gz 10.3 GB Report
EGAF00007273145 fastq.gz 10.3 GB Report
EGAF00007273146 fastq.gz 5.4 GB Report
EGAF00007273147 fastq.gz 5.4 GB Report
EGAF00007273148 fastq.gz 7.1 GB Report
EGAF00007273149 fastq.gz 7.1 GB Report
EGAF00007273150 fastq.gz 9.6 GB Report
EGAF00007273151 fastq.gz 9.6 GB Report
EGAF00007273152 fastq.gz 26.8 MB Report
EGAF00007273153 fastq.gz 26.8 MB Report
180 Files (657.7 GB)