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PGDx elio™ plasma resolve assay: targeted sequencing analyses of WBC DNA

The dataset "PGDx elio™ plasma resolve assay: targeted sequencing analyses of WBC DNA" includes paired end FASTQ reads of 49 white blood cell (WBC) genomic DNA samples from metastatic colorectal cancer patients. Sequencing was performed using a panel consisting of 33 genes, covering over 237,000 bp, targeting 25,000x depth across the targeted regions.

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Data Access Policy of NKI-AvL TGO

Data Access Policy of NKI-AvL TGO To request access to this specific dataset, and in order to comply with local and (inter)national regulations, please follow the steps described below: 1. Please fill in the information requested on the website: ega.nki.nl 2. Once you’ve submitted this information, the Data Access Committee (DAC) and the NKI-AVL Internal Review Board (IRB) will review your planned study and its goals and judge whether it is competing with our interests. The DAC and IRB can approve or decline your request or request a modification. 3. Upon approval by the IRB, you will receive a Data Transfer Agreement (DTA) that needs to be filled in and signed by the legal representative of your institute / company. 4. Upon acceptance of a signed DTA by our Knowledge Transfer & Contracting Office (KT&C), your party will receive a copy signed by our legal representative, and you will need to submit your access request via the EGA website

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006695 Whole Genome Sequencing
  • No changes. Only the EGAS00001006695 study description text was changed.
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00007692647 fastq.gz 6.5 GB
EGAF00007692648 fastq.gz 6.6 GB
EGAF00007692655 fastq.gz 7.3 GB
EGAF00007692656 fastq.gz 7.3 GB
EGAF00007692657 fastq.gz 5.5 GB
EGAF00007692658 fastq.gz 5.6 GB
EGAF00007692659 fastq.gz 5.6 GB
EGAF00007692660 fastq.gz 5.6 GB
EGAF00007692661 fastq.gz 5.3 GB
EGAF00007692662 fastq.gz 5.3 GB
EGAF00007692663 fastq.gz 6.8 GB
EGAF00007692664 fastq.gz 6.9 GB
EGAF00007692669 fastq.gz 8.1 GB
EGAF00007692670 fastq.gz 8.1 GB
EGAF00007692671 fastq.gz 7.1 GB
EGAF00007692672 fastq.gz 7.2 GB
EGAF00007692673 fastq.gz 6.8 GB
EGAF00007692674 fastq.gz 6.8 GB
EGAF00007692675 fastq.gz 6.9 GB
EGAF00007692676 fastq.gz 7.1 GB
EGAF00007692679 fastq.gz 8.0 GB
EGAF00007692680 fastq.gz 8.2 GB
EGAF00007692681 fastq.gz 7.6 GB
EGAF00007692682 fastq.gz 7.6 GB
EGAF00007692683 fastq.gz 6.3 GB
EGAF00007692684 fastq.gz 6.4 GB
EGAF00007692685 fastq.gz 4.9 GB
EGAF00007692686 fastq.gz 4.9 GB
EGAF00007692687 fastq.gz 6.6 GB
EGAF00007692688 fastq.gz 6.7 GB
EGAF00007692689 fastq.gz 7.0 GB
EGAF00007692690 fastq.gz 7.1 GB
EGAF00007692691 fastq.gz 7.2 GB
EGAF00007692692 fastq.gz 7.2 GB
EGAF00007692693 fastq.gz 6.0 GB
EGAF00007692694 fastq.gz 6.0 GB
EGAF00007692697 fastq.gz 6.0 GB
EGAF00007692698 fastq.gz 6.1 GB
EGAF00007692699 fastq.gz 5.5 GB
EGAF00007692700 fastq.gz 5.5 GB
EGAF00007692701 fastq.gz 6.7 GB
EGAF00007692702 fastq.gz 6.8 GB
EGAF00007692705 fastq.gz 5.2 GB
EGAF00007692706 fastq.gz 5.3 GB
EGAF00007692707 fastq.gz 6.2 GB
EGAF00007692708 fastq.gz 6.3 GB
EGAF00007692709 fastq.gz 7.1 GB
EGAF00007692710 fastq.gz 7.2 GB
EGAF00007692711 fastq.gz 7.2 GB
EGAF00007692712 fastq.gz 7.3 GB
EGAF00007692713 fastq.gz 7.0 GB
EGAF00007692714 fastq.gz 7.1 GB
EGAF00007692717 fastq.gz 7.2 GB
EGAF00007692718 fastq.gz 7.4 GB
EGAF00007692721 fastq.gz 7.6 GB
EGAF00007692722 fastq.gz 7.7 GB
EGAF00007692723 fastq.gz 7.1 GB
EGAF00007692724 fastq.gz 7.2 GB
EGAF00007692725 fastq.gz 6.8 GB
EGAF00007692726 fastq.gz 6.8 GB
EGAF00007692727 fastq.gz 7.1 GB
EGAF00007692728 fastq.gz 7.2 GB
EGAF00007692729 fastq.gz 6.6 GB
EGAF00007692730 fastq.gz 6.7 GB
EGAF00007692739 fastq.gz 7.0 GB
EGAF00007692740 fastq.gz 7.2 GB
EGAF00007692749 fastq.gz 6.8 GB
EGAF00007692750 fastq.gz 6.8 GB
EGAF00007692759 fastq.gz 7.2 GB
EGAF00007692760 fastq.gz 7.3 GB
EGAF00007692767 fastq.gz 8.6 GB
EGAF00007692768 fastq.gz 8.8 GB
EGAF00007692777 fastq.gz 7.0 GB
EGAF00007692778 fastq.gz 7.2 GB
EGAF00007692785 fastq.gz 5.7 GB
EGAF00007692786 fastq.gz 5.8 GB
EGAF00007692795 fastq.gz 5.6 GB
EGAF00007692796 fastq.gz 5.6 GB
EGAF00007692803 fastq.gz 4.9 GB
EGAF00007692804 fastq.gz 4.9 GB
EGAF00007692811 fastq.gz 5.7 GB
EGAF00007692812 fastq.gz 5.7 GB
EGAF00007692821 fastq.gz 5.7 GB
EGAF00007692822 fastq.gz 5.9 GB
EGAF00007692833 fastq.gz 7.1 GB
EGAF00007692834 fastq.gz 7.3 GB
EGAF00007692841 fastq.gz 7.5 GB
EGAF00007692842 fastq.gz 7.6 GB
EGAF00007692849 fastq.gz 7.1 GB
EGAF00007692850 fastq.gz 7.2 GB
EGAF00007692859 fastq.gz 6.5 GB
EGAF00007692860 fastq.gz 6.5 GB
EGAF00007692869 fastq.gz 7.8 GB
EGAF00007692870 fastq.gz 7.9 GB
EGAF00007692881 fastq.gz 6.2 GB
EGAF00007692882 fastq.gz 6.2 GB
EGAF00007692891 fastq.gz 5.8 GB
EGAF00007692892 fastq.gz 5.8 GB
98 Files (654.0 GB)