RNA-seq of cells after injection into immunodeficient mice
This dataset includes 73 samples profiled by high-throughput Illumina sequencing, in bam format, aligned to GRCh37. Normal human CD34+ cord blood (CB), bone marrow (BM), or post-natal thymus (PNT) cells were transduced with various combinations of T-ALL oncogenes, cultured in vitro on OP9-DL1 feeders for up to 25 days, and then transplanted into immunodeficient NSG or NRG mice. The samples were collected after development of frank leukemia in recipient mice.
- 23/11/2022
- 73 samples
- DAC: EGAC00000000011
- Technology: Illumina HiSeq 2500
DUO:0000012 version: 2021-02-23
research specific restrictions
This data use modifier indicates that use is limited to studies of a certain research type.
DUO:0000025 version: 2021-02-23
time limit on use
This data use modifier indicates that use is approved for a specific number of months.
BC Cancer, part of the Provincial Health Services Authority - Data Access Policy
Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001006055 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00007773859 | bam | 2.5 GB | Report |
|
| EGAF00007773860 | bam | 2.9 GB | Report |
|
| EGAF00007773861 | bam | 2.7 GB | Report |
|
| EGAF00007773862 | bam | 2.7 GB | Report |
|
| EGAF00007773864 | bam | 2.5 GB | Report |
|
| EGAF00007773865 | bam | 2.4 GB | Report |
|
| EGAF00007773867 | bam | 2.7 GB | Report |
|
| EGAF00007773868 | bam | 2.1 GB | Report |
|
| EGAF00007773869 | bam | 2.8 GB | Report |
|
| EGAF00007773870 | bam | 2.8 GB | Report |
|
| EGAF00007773871 | bam | 2.5 GB | Report |
|
| EGAF00007773872 | bam | 2.5 GB | Report |
|
| EGAF00007773873 | bam | 2.5 GB | Report |
|
| EGAF00007773874 | bam | 2.5 GB | Report |
|
| EGAF00007773875 | bam | 2.6 GB | Report |
|
| EGAF00007773876 | bam | 2.7 GB | Report |
|
| EGAF00007773877 | bam | 2.6 GB | Report |
|
| EGAF00007773970 | bam | 2.6 GB | Report |
|
| EGAF00007773971 | bam | 2.5 GB | Report |
|
| EGAF00007773972 | bam | 2.0 GB | Report |
|
| EGAF00007773973 | bam | 2.7 GB | Report |
|
| EGAF00007773974 | bam | 2.4 GB | Report |
|
| EGAF00007773975 | bam | 2.0 GB | Report |
|
| EGAF00007773976 | bam | 2.3 GB | Report |
|
| EGAF00007773977 | bam | 2.3 GB | Report |
|
| EGAF00007773978 | bam | 2.4 GB | Report |
|
| EGAF00007773979 | bam | 2.2 GB | Report |
|
| EGAF00007773980 | bam | 2.5 GB | Report |
|
| EGAF00007773981 | bam | 2.2 GB | Report |
|
| EGAF00007773982 | bam | 2.6 GB | Report |
|
| EGAF00007773983 | bam | 2.4 GB | Report |
|
| EGAF00007773984 | bam | 2.4 GB | Report |
|
| EGAF00007773986 | bam | 2.6 GB | Report |
|
| EGAF00007773987 | bam | 2.6 GB | Report |
|
| EGAF00007773988 | bam | 2.5 GB | Report |
|
| EGAF00007773989 | bam | 2.3 GB | Report |
|
| EGAF00007773990 | bam | 2.4 GB | Report |
|
| EGAF00007773991 | bam | 2.3 GB | Report |
|
| EGAF00007773992 | bam | 2.2 GB | Report |
|
| EGAF00007773993 | bam | 2.1 GB | Report |
|
| EGAF00007773994 | bam | 2.3 GB | Report |
|
| EGAF00007773995 | bam | 2.2 GB | Report |
|
| EGAF00007773997 | bam | 2.2 GB | Report |
|
| EGAF00007773998 | bam | 2.1 GB | Report |
|
| EGAF00007773999 | bam | 2.2 GB | Report |
|
| EGAF00007774000 | bam | 2.0 GB | Report |
|
| EGAF00007774001 | bam | 2.0 GB | Report |
|
| EGAF00007774002 | bam | 2.1 GB | Report |
|
| EGAF00007774003 | bam | 1.8 GB | Report |
|
| EGAF00007774004 | bam | 2.2 GB | Report |
|
| EGAF00007774005 | bam | 2.0 GB | Report |
|
| EGAF00007774006 | bam | 2.2 GB | Report |
|
| EGAF00007774007 | bam | 2.1 GB | Report |
|
| EGAF00007774008 | bam | 2.1 GB | Report |
|
| EGAF00007774009 | bam | 2.2 GB | Report |
|
| EGAF00007774010 | bam | 1.8 GB | Report |
|
| EGAF00007774011 | bam | 1.9 GB | Report |
|
| EGAF00007774013 | bam | 1.8 GB | Report |
|
| EGAF00007774014 | bam | 1.6 GB | Report |
|
| EGAF00007774015 | bam | 1.3 GB | Report |
|
| EGAF00007774016 | bam | 1.8 GB | Report |
|
| EGAF00007774017 | bam | 2.0 GB | Report |
|
| EGAF00007774018 | bam | 1.7 GB | Report |
|
| EGAF00007774019 | bam | 1.8 GB | Report |
|
| EGAF00007774020 | bam | 1.8 GB | Report |
|
| EGAF00007774021 | bam | 1.8 GB | Report |
|
| EGAF00007774022 | bam | 1.9 GB | Report |
|
| EGAF00007774023 | bam | 1.8 GB | Report |
|
| EGAF00007774024 | bam | 1.7 GB | Report |
|
| EGAF00007774025 | bam | 1.8 GB | Report |
|
| EGAF00007774026 | bam | 1.8 GB | Report |
|
| EGAF00007774027 | bam | 1.8 GB | Report |
|
| EGAF00007774028 | bam | 1.9 GB | Report |
|
| 73 Files (162.1 GB) | ||||