COVID-19 progression and resolution in common variable immunodeficiency patients
116,958 single-cell transcriptomes from samples of peripheral blood mononuclear cells (PBMCs) from five CVID patients at three distinct stages of the SARS-CoV-2 infection: 1) baseline, before viral infection, 2) progression, during viral infection, and 3) convalescence, once the viral infection had been resolved and the patient was PCR negative. CVID patients were under regular immunoglobulin replacement therapy and displayed only mild symptoms during SARS-CoV-2 infection.
- 02/12/2022
- 12 samples
- DAC: EGAC00001000205
- Technology: Illumina NovaSeq 6000
Wellcome Trust Sanger Institute Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004489 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00005415091 | cram | 14.1 GB | Report |
|
| EGAF00005415092 | cram | 10.0 GB | Report |
|
| EGAF00005415093 | cram | 12.4 GB | Report |
|
| EGAF00005415094 | cram | 13.7 GB | Report |
|
| EGAF00005415107 | cram | 2.5 GB | Report |
|
| EGAF00005415108 | cram | 2.6 GB | Report |
|
| EGAF00005415109 | cram | 1.7 GB | Report |
|
| EGAF00005415110 | cram | 3.4 GB | Report |
|
| EGAF00005415123 | cram | 1.8 GB | Report |
|
| EGAF00005415124 | cram | 1.9 GB | Report |
|
| EGAF00005415125 | cram | 1.9 GB | Report |
|
| EGAF00005415126 | cram | 1.8 GB | Report |
|
| EGAF00005415127 | cram | 11.5 GB | Report |
|
| EGAF00005415128 | cram | 9.7 GB | Report |
|
| EGAF00005415129 | cram | 15.6 GB | Report |
|
| EGAF00005415130 | cram | 15.2 GB | Report |
|
| EGAF00005415131 | cram | 7.8 GB | Report |
|
| EGAF00005415132 | cram | 6.6 GB | Report |
|
| EGAF00005415133 | cram | 13.5 GB | Report |
|
| EGAF00005415134 | cram | 9.7 GB | Report |
|
| EGAF00005415139 | cram | 3.1 GB | Report |
|
| EGAF00005415141 | cram | 3.1 GB | Report |
|
| EGAF00005415143 | cram | 3.0 GB | Report |
|
| EGAF00005415145 | cram | 2.8 GB | Report |
|
| EGAF00005415147 | cram | 2.3 GB | Report |
|
| EGAF00005415148 | cram | 2.8 GB | Report |
|
| EGAF00005415149 | cram | 2.7 GB | Report |
|
| EGAF00005415150 | cram | 1.6 GB | Report |
|
| EGAF00005415159 | cram | 1.2 GB | Report |
|
| EGAF00005415160 | cram | 2.2 GB | Report |
|
| EGAF00005415161 | cram | 1.6 GB | Report |
|
| EGAF00005415162 | cram | 732.1 MB | Report |
|
| EGAF00005415163 | cram | 1.7 GB | Report |
|
| EGAF00005415164 | cram | 2.0 GB | Report |
|
| EGAF00005415165 | cram | 1.5 GB | Report |
|
| EGAF00005415166 | cram | 1.5 GB | Report |
|
| EGAF00005415188 | cram | 14.7 GB | Report |
|
| EGAF00005415190 | cram | 15.9 GB | Report |
|
| EGAF00005415192 | cram | 13.7 GB | Report |
|
| EGAF00005415194 | cram | 12.9 GB | Report |
|
| EGAF00005415203 | cram | 3.9 GB | Report |
|
| EGAF00005415204 | cram | 3.0 GB | Report |
|
| EGAF00005415205 | cram | 4.1 GB | Report |
|
| EGAF00005415206 | cram | 3.2 GB | Report |
|
| EGAF00005415219 | cram | 2.1 GB | Report |
|
| EGAF00005415220 | cram | 1.7 GB | Report |
|
| EGAF00005415221 | cram | 1.6 GB | Report |
|
| EGAF00005415222 | cram | 1.4 GB | Report |
|
| EGAF00005415223 | cram | 11.6 GB | Report |
|
| EGAF00005415224 | cram | 15.4 GB | Report |
|
| EGAF00005415225 | cram | 9.7 GB | Report |
|
| EGAF00005415226 | cram | 12.7 GB | Report |
|
| EGAF00005415231 | cram | 9.0 GB | Report |
|
| EGAF00005415232 | cram | 16.7 GB | Report |
|
| EGAF00005415233 | cram | 12.7 GB | Report |
|
| EGAF00005415234 | cram | 8.1 GB | Report |
|
| EGAF00005415239 | cram | 4.4 GB | Report |
|
| EGAF00005415240 | cram | 3.8 GB | Report |
|
| EGAF00005415241 | cram | 4.6 GB | Report |
|
| EGAF00005415242 | cram | 3.2 GB | Report |
|
| EGAF00005415247 | cram | 4.4 GB | Report |
|
| EGAF00005415248 | cram | 4.4 GB | Report |
|
| EGAF00005415249 | cram | 5.5 GB | Report |
|
| EGAF00005415250 | cram | 3.9 GB | Report |
|
| EGAF00005415255 | cram | 2.4 GB | Report |
|
| EGAF00005415256 | cram | 2.5 GB | Report |
|
| EGAF00005415257 | cram | 2.2 GB | Report |
|
| EGAF00005415258 | cram | 1.4 GB | Report |
|
| EGAF00005415259 | cram | 1.2 GB | Report |
|
| EGAF00005415260 | cram | 1.6 GB | Report |
|
| EGAF00005415261 | cram | 2.2 GB | Report |
|
| EGAF00005415262 | cram | 2.3 GB | Report |
|
| EGAF00007779950 | bam | 757.7 MB | Report |
|
| EGAF00007779951 | bam | 742.1 MB | Report |
|
| EGAF00007779952 | bam | 1.7 GB | Report |
|
| EGAF00007779953 | bam | 1.8 GB | Report |
|
| EGAF00007779954 | bam | 2.7 GB | Report |
|
| EGAF00007779955 | bam | 2.7 GB | Report |
|
| EGAF00007779956 | bam | 5.4 GB | Report |
|
| EGAF00007779957 | bam | 5.3 GB | Report |
|
| EGAF00007779958 | bam | 11.1 GB | Report |
|
| EGAF00007779959 | bam | 10.8 GB | Report |
|
| EGAF00007779960 | bam | 767.4 MB | Report |
|
| EGAF00007779961 | bam | 757.1 MB | Report |
|
| EGAF00007779962 | bam | 1.8 GB | Report |
|
| EGAF00007779963 | bam | 1.8 GB | Report |
|
| EGAF00007779964 | bam | 861.8 MB | Report |
|
| EGAF00007779965 | bam | 842.9 MB | Report |
|
| EGAF00007779966 | bam | 1.8 GB | Report |
|
| EGAF00007779967 | bam | 1.8 GB | Report |
|
| EGAF00007779968 | bam | 2.5 GB | Report |
|
| EGAF00007779969 | bam | 2.5 GB | Report |
|
| EGAF00007779970 | bam | 4.5 GB | Report |
|
| EGAF00007779971 | bam | 4.4 GB | Report |
|
| EGAF00007779972 | bam | 14.9 GB | Report |
|
| EGAF00007779973 | bam | 14.6 GB | Report |
|
| EGAF00007779974 | bam | 636.3 MB | Report |
|
| EGAF00007779975 | bam | 627.1 MB | Report |
|
| EGAF00007779976 | bam | 1.8 GB | Report |
|
| EGAF00007779977 | bam | 1.8 GB | Report |
|
| EGAF00007779978 | bam | 896.6 MB | Report |
|
| EGAF00007779979 | bam | 882.1 MB | Report |
|
| EGAF00007779980 | bam | 2.4 GB | Report |
|
| EGAF00007779981 | bam | 2.4 GB | Report |
|
| EGAF00007779982 | bam | 2.0 GB | Report |
|
| EGAF00007779983 | bam | 2.0 GB | Report |
|
| EGAF00007779984 | bam | 4.5 GB | Report |
|
| EGAF00007779985 | bam | 4.4 GB | Report |
|
| EGAF00007779986 | bam | 5.0 GB | Report |
|
| EGAF00007779987 | bam | 5.1 GB | Report |
|
| EGAF00007779988 | bam | 11.7 GB | Report |
|
| EGAF00007779989 | bam | 11.4 GB | Report |
|
| EGAF00007779990 | bam | 854.5 MB | Report |
|
| EGAF00007779991 | bam | 844.4 MB | Report |
|
| EGAF00007779992 | bam | 2.6 GB | Report |
|
| EGAF00007779993 | bam | 2.6 GB | Report |
|
| 116 Files (576.8 GB) | ||||