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COVID-19 progression and resolution in common variable immunodeficiency patients

116,958 single-cell transcriptomes from samples of peripheral blood mononuclear cells (PBMCs) from five CVID patients at three distinct stages of the SARS-CoV-2 infection: 1) baseline, before viral infection, 2) progression, during viral infection, and 3) convalescence, once the viral infection had been resolved and the patient was PCR negative. CVID patients were under regular immunoglobulin replacement therapy and displayed only mild symptoms during SARS-CoV-2 infection.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004489 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005415091 cram 14.1 GB
EGAF00005415092 cram 10.0 GB
EGAF00005415093 cram 12.4 GB
EGAF00005415094 cram 13.7 GB
EGAF00005415107 cram 2.5 GB
EGAF00005415108 cram 2.6 GB
EGAF00005415109 cram 1.7 GB
EGAF00005415110 cram 3.4 GB
EGAF00005415123 cram 1.8 GB
EGAF00005415124 cram 1.9 GB
EGAF00005415125 cram 1.9 GB
EGAF00005415126 cram 1.8 GB
EGAF00005415127 cram 11.5 GB
EGAF00005415128 cram 9.7 GB
EGAF00005415129 cram 15.6 GB
EGAF00005415130 cram 15.2 GB
EGAF00005415131 cram 7.8 GB
EGAF00005415132 cram 6.6 GB
EGAF00005415133 cram 13.5 GB
EGAF00005415134 cram 9.7 GB
EGAF00005415139 cram 3.1 GB
EGAF00005415141 cram 3.1 GB
EGAF00005415143 cram 3.0 GB
EGAF00005415145 cram 2.8 GB
EGAF00005415147 cram 2.3 GB
EGAF00005415148 cram 2.8 GB
EGAF00005415149 cram 2.7 GB
EGAF00005415150 cram 1.6 GB
EGAF00005415159 cram 1.2 GB
EGAF00005415160 cram 2.2 GB
EGAF00005415161 cram 1.6 GB
EGAF00005415162 cram 732.1 MB
EGAF00005415163 cram 1.7 GB
EGAF00005415164 cram 2.0 GB
EGAF00005415165 cram 1.5 GB
EGAF00005415166 cram 1.5 GB
EGAF00005415188 cram 14.7 GB
EGAF00005415190 cram 15.9 GB
EGAF00005415192 cram 13.7 GB
EGAF00005415194 cram 12.9 GB
EGAF00005415203 cram 3.9 GB
EGAF00005415204 cram 3.0 GB
EGAF00005415205 cram 4.1 GB
EGAF00005415206 cram 3.2 GB
EGAF00005415219 cram 2.1 GB
EGAF00005415220 cram 1.7 GB
EGAF00005415221 cram 1.6 GB
EGAF00005415222 cram 1.4 GB
EGAF00005415223 cram 11.6 GB
EGAF00005415224 cram 15.4 GB
EGAF00005415225 cram 9.7 GB
EGAF00005415226 cram 12.7 GB
EGAF00005415231 cram 9.0 GB
EGAF00005415232 cram 16.7 GB
EGAF00005415233 cram 12.7 GB
EGAF00005415234 cram 8.1 GB
EGAF00005415239 cram 4.4 GB
EGAF00005415240 cram 3.8 GB
EGAF00005415241 cram 4.6 GB
EGAF00005415242 cram 3.2 GB
EGAF00005415247 cram 4.4 GB
EGAF00005415248 cram 4.4 GB
EGAF00005415249 cram 5.5 GB
EGAF00005415250 cram 3.9 GB
EGAF00005415255 cram 2.4 GB
EGAF00005415256 cram 2.5 GB
EGAF00005415257 cram 2.2 GB
EGAF00005415258 cram 1.4 GB
EGAF00005415259 cram 1.2 GB
EGAF00005415260 cram 1.6 GB
EGAF00005415261 cram 2.2 GB
EGAF00005415262 cram 2.3 GB
EGAF00007779950 bam 757.7 MB
EGAF00007779951 bam 742.1 MB
EGAF00007779952 bam 1.7 GB
EGAF00007779953 bam 1.8 GB
EGAF00007779954 bam 2.7 GB
EGAF00007779955 bam 2.7 GB
EGAF00007779956 bam 5.4 GB
EGAF00007779957 bam 5.3 GB
EGAF00007779958 bam 11.1 GB
EGAF00007779959 bam 10.8 GB
EGAF00007779960 bam 767.4 MB
EGAF00007779961 bam 757.1 MB
EGAF00007779962 bam 1.8 GB
EGAF00007779963 bam 1.8 GB
EGAF00007779964 bam 861.8 MB
EGAF00007779965 bam 842.9 MB
EGAF00007779966 bam 1.8 GB
EGAF00007779967 bam 1.8 GB
EGAF00007779968 bam 2.5 GB
EGAF00007779969 bam 2.5 GB
EGAF00007779970 bam 4.5 GB
EGAF00007779971 bam 4.4 GB
EGAF00007779972 bam 14.9 GB
EGAF00007779973 bam 14.6 GB
EGAF00007779974 bam 636.3 MB
EGAF00007779975 bam 627.1 MB
EGAF00007779976 bam 1.8 GB
EGAF00007779977 bam 1.8 GB
EGAF00007779978 bam 896.6 MB
EGAF00007779979 bam 882.1 MB
EGAF00007779980 bam 2.4 GB
EGAF00007779981 bam 2.4 GB
EGAF00007779982 bam 2.0 GB
EGAF00007779983 bam 2.0 GB
EGAF00007779984 bam 4.5 GB
EGAF00007779985 bam 4.4 GB
EGAF00007779986 bam 5.0 GB
EGAF00007779987 bam 5.1 GB
EGAF00007779988 bam 11.7 GB
EGAF00007779989 bam 11.4 GB
EGAF00007779990 bam 854.5 MB
EGAF00007779991 bam 844.4 MB
EGAF00007779992 bam 2.6 GB
EGAF00007779993 bam 2.6 GB
116 Files (576.8 GB)