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Single cell RNA-sequencing of tissues from NSCLC patients treated with chemoimmunotherapy

The goal of this study is to characterize immune cell populations by single cell RNA-sequencing (scRNA-seq) in tumor and uninvolved normal tissues from non-small cell lung cancer (NSCLC) patients with resectable non-small cell lung cancer and who received neoadjuvant chemoimmunotherapy. scRNA-seq was performed on seven pairs of tumor and normal tissues as well as one lymph node (LN) sample. Data set includes pair-end fastq files for single cell RNA sequencing of 7 neo-immuno patients. (Total 15 samples and 50 runs).

Request Access

Academic requests of data access will be granted after approval from institutional committee and institutional/Bristol Myers Squibb alliance.

The deposited single-cell RNA-sequencing raw data will be made available upon acceptance of academic requests. Access to this dataset is controlled by the institutional Data Access Committee in compliance with the NIH policy for Data Management and Sharing and in accordance with an institutional/Bristol Myers Squibb alliance.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006728 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00007731249 fastq.gz 15.0 GB
EGAF00007731250 fastq.gz 15.6 GB
EGAF00007731251 fastq.gz 15.0 GB
EGAF00007731252 fastq.gz 15.7 GB
EGAF00007731253 fastq.gz 14.8 GB
EGAF00007731254 fastq.gz 15.5 GB
EGAF00007731255 fastq.gz 14.9 GB
EGAF00007731256 fastq.gz 15.6 GB
EGAF00007731257 fastq.gz 5.5 GB
EGAF00007731258 fastq.gz 14.0 GB
EGAF00007731259 fastq.gz 5.4 GB
EGAF00007731260 fastq.gz 13.9 GB
EGAF00007731261 fastq.gz 4.7 GB
EGAF00007731262 fastq.gz 11.9 GB
EGAF00007731263 fastq.gz 4.7 GB
EGAF00007731264 fastq.gz 11.8 GB
EGAF00007731265 fastq.gz 5.1 GB
EGAF00007731266 fastq.gz 13.0 GB
EGAF00007731267 fastq.gz 5.1 GB
EGAF00007731268 fastq.gz 13.0 GB
EGAF00007731269 fastq.gz 2.7 GB
EGAF00007731270 fastq.gz 6.8 GB
EGAF00007731271 fastq.gz 2.7 GB
EGAF00007731272 fastq.gz 6.8 GB
EGAF00007731273 fastq.gz 2.7 GB
EGAF00007731274 fastq.gz 6.7 GB
EGAF00007731275 fastq.gz 2.7 GB
EGAF00007731276 fastq.gz 6.7 GB
EGAF00007731277 fastq.gz 2.8 GB
EGAF00007731278 fastq.gz 7.0 GB
EGAF00007731279 fastq.gz 3.1 GB
EGAF00007731280 fastq.gz 7.8 GB
EGAF00007731281 fastq.gz 3.1 GB
EGAF00007731282 fastq.gz 7.7 GB
EGAF00007731283 fastq.gz 3.1 GB
EGAF00007731284 fastq.gz 7.7 GB
EGAF00007731285 fastq.gz 3.1 GB
EGAF00007731286 fastq.gz 7.6 GB
EGAF00007731287 fastq.gz 3.1 GB
EGAF00007731288 fastq.gz 7.6 GB
EGAF00007731289 fastq.gz 3.1 GB
EGAF00007731290 fastq.gz 7.6 GB
EGAF00007731291 fastq.gz 3.0 GB
EGAF00007731292 fastq.gz 7.5 GB
EGAF00007731293 fastq.gz 3.0 GB
EGAF00007731294 fastq.gz 7.5 GB
EGAF00007731295 fastq.gz 3.3 GB
EGAF00007731296 fastq.gz 8.3 GB
EGAF00007731297 fastq.gz 3.4 GB
EGAF00007731298 fastq.gz 8.7 GB
EGAF00007731299 fastq.gz 3.4 GB
EGAF00007731300 fastq.gz 8.6 GB
EGAF00007731301 fastq.gz 3.4 GB
EGAF00007731302 fastq.gz 8.6 GB
EGAF00007731303 fastq.gz 3.4 GB
EGAF00007731304 fastq.gz 8.5 GB
EGAF00007731305 fastq.gz 3.8 GB
EGAF00007731306 fastq.gz 9.7 GB
EGAF00007731307 fastq.gz 3.8 GB
EGAF00007731308 fastq.gz 9.7 GB
EGAF00007731309 fastq.gz 3.8 GB
EGAF00007731310 fastq.gz 9.6 GB
EGAF00007731311 fastq.gz 3.8 GB
EGAF00007731312 fastq.gz 9.6 GB
EGAF00007731313 fastq.gz 3.2 GB
EGAF00007731314 fastq.gz 7.9 GB
EGAF00007731315 fastq.gz 3.1 GB
EGAF00007731316 fastq.gz 7.9 GB
EGAF00007731317 fastq.gz 3.1 GB
EGAF00007731318 fastq.gz 7.9 GB
EGAF00007731319 fastq.gz 3.1 GB
EGAF00007731320 fastq.gz 7.8 GB
EGAF00007731321 fastq.gz 2.9 GB
EGAF00007731322 fastq.gz 7.3 GB
EGAF00007731323 fastq.gz 2.9 GB
EGAF00007731324 fastq.gz 7.3 GB
EGAF00007731325 fastq.gz 2.8 GB
EGAF00007731326 fastq.gz 7.2 GB
EGAF00007731327 fastq.gz 2.8 GB
EGAF00007731328 fastq.gz 7.2 GB
EGAF00007731329 fastq.gz 2.8 GB
EGAF00007731330 fastq.gz 7.2 GB
EGAF00007731331 fastq.gz 2.8 GB
EGAF00007731332 fastq.gz 7.1 GB
EGAF00007731333 fastq.gz 2.8 GB
EGAF00007731334 fastq.gz 7.1 GB
EGAF00007731335 fastq.gz 2.8 GB
EGAF00007731336 fastq.gz 7.1 GB
EGAF00007809210 fastq.gz 2.9 GB
EGAF00007809211 fastq.gz 7.1 GB
EGAF00007809212 fastq.gz 2.9 GB
EGAF00007809213 fastq.gz 7.1 GB
EGAF00007809214 fastq.gz 2.8 GB
EGAF00007809215 fastq.gz 7.1 GB
EGAF00007809216 fastq.gz 3.3 GB
EGAF00007809217 fastq.gz 8.4 GB
EGAF00007809218 fastq.gz 3.3 GB
EGAF00007809219 fastq.gz 8.3 GB
EGAF00007809220 fastq.gz 3.3 GB
EGAF00007809221 fastq.gz 8.3 GB
100 Files (665.3 GB)