About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single cell RNA-sequencing of tissues from NSCLC patients treated with chemoimmunotherapy

The goal of this study is to characterize immune cell populations by single cell RNA-sequencing (scRNA-seq) in tumor and uninvolved normal tissues from non-small cell lung cancer (NSCLC) patients with resectable non-small cell lung cancer and who received neoadjuvant chemoimmunotherapy. scRNA-seq was performed on seven pairs of tumor and normal tissues as well as one lymph node (LN) sample. Data set includes pair-end fastq files for single cell RNA sequencing of 7 neo-immuno patients. (Total 15 samples and 50 runs).

Request Access

Academic requests of data access will be granted after approval from institutional committee and institutional/Bristol Myers Squibb alliance.

The deposited single-cell RNA-sequencing raw data will be made available upon acceptance of academic requests. Access to this dataset is controlled by the institutional Data Access Committee in compliance with the NIH policy for Data Management and Sharing and in accordance with an institutional/Bristol Myers Squibb alliance.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006728 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007731249 fastq.gz 15.0 GB Report
EGAF00007731250 fastq.gz 15.6 GB Report
EGAF00007731251 fastq.gz 15.0 GB Report
EGAF00007731252 fastq.gz 15.7 GB Report
EGAF00007731253 fastq.gz 14.8 GB Report
EGAF00007731254 fastq.gz 15.5 GB Report
EGAF00007731255 fastq.gz 14.9 GB Report
EGAF00007731256 fastq.gz 15.6 GB Report
EGAF00007731257 fastq.gz 5.5 GB Report
EGAF00007731258 fastq.gz 14.0 GB Report
EGAF00007731259 fastq.gz 5.4 GB Report
EGAF00007731260 fastq.gz 13.9 GB Report
EGAF00007731261 fastq.gz 4.7 GB Report
EGAF00007731262 fastq.gz 11.9 GB Report
EGAF00007731263 fastq.gz 4.7 GB Report
EGAF00007731264 fastq.gz 11.8 GB Report
EGAF00007731265 fastq.gz 5.1 GB Report
EGAF00007731266 fastq.gz 13.0 GB Report
EGAF00007731267 fastq.gz 5.1 GB Report
EGAF00007731268 fastq.gz 13.0 GB Report
EGAF00007731269 fastq.gz 2.7 GB Report
EGAF00007731270 fastq.gz 6.8 GB Report
EGAF00007731271 fastq.gz 2.7 GB Report
EGAF00007731272 fastq.gz 6.8 GB Report
EGAF00007731273 fastq.gz 2.7 GB Report
EGAF00007731274 fastq.gz 6.7 GB Report
EGAF00007731275 fastq.gz 2.7 GB Report
EGAF00007731276 fastq.gz 6.7 GB Report
EGAF00007731277 fastq.gz 2.8 GB Report
EGAF00007731278 fastq.gz 7.0 GB Report
EGAF00007731279 fastq.gz 3.1 GB Report
EGAF00007731280 fastq.gz 7.8 GB Report
EGAF00007731281 fastq.gz 3.1 GB Report
EGAF00007731282 fastq.gz 7.7 GB Report
EGAF00007731283 fastq.gz 3.1 GB Report
EGAF00007731284 fastq.gz 7.7 GB Report
EGAF00007731285 fastq.gz 3.1 GB Report
EGAF00007731286 fastq.gz 7.6 GB Report
EGAF00007731287 fastq.gz 3.1 GB Report
EGAF00007731288 fastq.gz 7.6 GB Report
EGAF00007731289 fastq.gz 3.1 GB Report
EGAF00007731290 fastq.gz 7.6 GB Report
EGAF00007731291 fastq.gz 3.0 GB Report
EGAF00007731292 fastq.gz 7.5 GB Report
EGAF00007731293 fastq.gz 3.0 GB Report
EGAF00007731294 fastq.gz 7.5 GB Report
EGAF00007731295 fastq.gz 3.3 GB Report
EGAF00007731296 fastq.gz 8.3 GB Report
EGAF00007731297 fastq.gz 3.4 GB Report
EGAF00007731298 fastq.gz 8.7 GB Report
EGAF00007731299 fastq.gz 3.4 GB Report
EGAF00007731300 fastq.gz 8.6 GB Report
EGAF00007731301 fastq.gz 3.4 GB Report
EGAF00007731302 fastq.gz 8.6 GB Report
EGAF00007731303 fastq.gz 3.4 GB Report
EGAF00007731304 fastq.gz 8.5 GB Report
EGAF00007731305 fastq.gz 3.8 GB Report
EGAF00007731306 fastq.gz 9.7 GB Report
EGAF00007731307 fastq.gz 3.8 GB Report
EGAF00007731308 fastq.gz 9.7 GB Report
EGAF00007731309 fastq.gz 3.8 GB Report
EGAF00007731310 fastq.gz 9.6 GB Report
EGAF00007731311 fastq.gz 3.8 GB Report
EGAF00007731312 fastq.gz 9.6 GB Report
EGAF00007731313 fastq.gz 3.2 GB Report
EGAF00007731314 fastq.gz 7.9 GB Report
EGAF00007731315 fastq.gz 3.1 GB Report
EGAF00007731316 fastq.gz 7.9 GB Report
EGAF00007731317 fastq.gz 3.1 GB Report
EGAF00007731318 fastq.gz 7.9 GB Report
EGAF00007731319 fastq.gz 3.1 GB Report
EGAF00007731320 fastq.gz 7.8 GB Report
EGAF00007731321 fastq.gz 2.9 GB Report
EGAF00007731322 fastq.gz 7.3 GB Report
EGAF00007731323 fastq.gz 2.9 GB Report
EGAF00007731324 fastq.gz 7.3 GB Report
EGAF00007731325 fastq.gz 2.8 GB Report
EGAF00007731326 fastq.gz 7.2 GB Report
EGAF00007731327 fastq.gz 2.8 GB Report
EGAF00007731328 fastq.gz 7.2 GB Report
EGAF00007731329 fastq.gz 2.8 GB Report
EGAF00007731330 fastq.gz 7.2 GB Report
EGAF00007731331 fastq.gz 2.8 GB Report
EGAF00007731332 fastq.gz 7.1 GB Report
EGAF00007731333 fastq.gz 2.8 GB Report
EGAF00007731334 fastq.gz 7.1 GB Report
EGAF00007731335 fastq.gz 2.8 GB Report
EGAF00007731336 fastq.gz 7.1 GB Report
EGAF00007809210 fastq.gz 2.9 GB Report
EGAF00007809211 fastq.gz 7.1 GB Report
EGAF00007809212 fastq.gz 2.9 GB Report
EGAF00007809213 fastq.gz 7.1 GB Report
EGAF00007809214 fastq.gz 2.8 GB Report
EGAF00007809215 fastq.gz 7.1 GB Report
EGAF00007809216 fastq.gz 3.3 GB Report
EGAF00007809217 fastq.gz 8.4 GB Report
EGAF00007809218 fastq.gz 3.3 GB Report
EGAF00007809219 fastq.gz 8.3 GB Report
EGAF00007809220 fastq.gz 3.3 GB Report
EGAF00007809221 fastq.gz 8.3 GB Report
100 Files (665.3 GB)