About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Concatenated long-read single-cell RNA sequencing of momentum biopsies of ovarian cancer patients

Concatenated long-read single-cell RNA sequencing samples prepared using 10X and the HIT-scIsoSeq protocol. The sequencing was performed on Sequel II Pacbio machine. 3 ovarian cancer patients, 5 omentum biopsies samples: 3 metastasis samples (one per patient), 2 healthy samples (one per patient except Patient2). 4 bam files per metastasis sample, 2 bam files per healthy sample.

Request Access

DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0004992

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000024
version: 2021-02-23

publication moratorium

This data use modifier indicates that requestor agrees not to publish results of studies until a specific date.

DUO:0000045
version: 2021-02-23

not for profit organisation use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations.

DUO:0000046
version: 2021-02-23

non-commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit use.

Data Access Policy of Datasets controlled by MF-DAC

ATTENTION: Please check the following policy and the documents/information to provide in order to get access to the requested datasets. You can find the governing policy on Zenodo under the link: https://zenodo.org/records/12517622 Please provide all information as requested in the document to the MF-DAC. Additionally, you can find more information about the Data Access Committee of the Medical Faculty of the University of Basel (MF-DAC) under the following link on Zenodo: https://zenodo.org/records/10137776

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006807 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007831894 bam 8.7 GB Report
EGAF00007831895 bam 7.6 GB Report
EGAF00007831896 bam 4.7 GB Report
EGAF00007831897 bam 8.8 GB Report
EGAF00007831898 bam 7.3 GB Report
EGAF00007831899 bam 9.1 GB Report
EGAF00007831900 bam 5.5 GB Report
EGAF00007831901 bam 6.6 GB Report
EGAF00007831902 bam 6.0 GB Report
EGAF00007831903 bam 5.1 GB Report
EGAF00007831904 bam 9.0 GB Report
EGAF00007831905 bam 4.8 GB Report
EGAF00007831906 bam 10.7 GB Report
EGAF00007831907 bam 9.1 GB Report
EGAF00007831908 bam 8.7 GB Report
EGAF00007831909 bam 9.4 GB Report
16 Files (121.0 GB)