About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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GELATO clinical trial RNA-Seq data (primary tumors and local recurrences)

RNA-Seq data of 10 lobular breast cancer primary tumors and 3 local recurrences obtained from 11 unique patients from GELATO clinical trial. The included raw transcriptome sequencing data in fastq format was generated using Illumina NovaSeq 6000 from archived FFPE material.

Request Access

DUO:0000001
version: 2021-02-23

data use permission

A data item that is used to indicate consent permissions for datasets and/or materials, and relates to the purposes for which datasets and/or material might be removed, stored or used.

Data Access Committee of the Kok group, NKI.

To request access to the datasets, please provide the following information in your Data Access Request: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and Dataset Accession Number(s) - Brief abstract of the Project in which the Data will be used (500 words max.) - All Individuals who will be allowed access to the requested datasets by the Recipient Institution After receipt and review of your Data Access Request by the Data Access Committee, you will receive a Data Transfer Agreement to be completed, signed and returned to KT&C and the Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the Data Access Committee reserves the right to withhold granting access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006902 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007846584 fastq.gz 903.5 MB Report
EGAF00007846585 fastq.gz 922.1 MB Report
EGAF00007846586 fastq.gz 572.7 MB Report
EGAF00007846587 fastq.gz 580.8 MB Report
EGAF00007846588 fastq.gz 532.7 MB Report
EGAF00007846589 fastq.gz 538.4 MB Report
EGAF00007846590 fastq.gz 323.9 MB Report
EGAF00007846591 fastq.gz 331.1 MB Report
EGAF00007846592 fastq.gz 672.0 MB Report
EGAF00007846593 fastq.gz 681.0 MB Report
EGAF00007846594 fastq.gz 629.3 MB Report
EGAF00007846595 fastq.gz 638.3 MB Report
EGAF00007846596 fastq.gz 96.4 MB Report
EGAF00007846597 fastq.gz 97.8 MB Report
EGAF00007846598 fastq.gz 641.8 MB Report
EGAF00007846599 fastq.gz 654.4 MB Report
EGAF00007846600 fastq.gz 825.8 MB Report
EGAF00007846601 fastq.gz 842.9 MB Report
EGAF00007846602 fastq.gz 419.6 MB Report
EGAF00007846603 fastq.gz 424.3 MB Report
EGAF00007846604 fastq.gz 272.5 MB Report
EGAF00007846605 fastq.gz 275.3 MB Report
EGAF00007846606 fastq.gz 602.3 MB Report
EGAF00007846607 fastq.gz 613.2 MB Report
EGAF00007846608 fastq.gz 839.1 MB Report
EGAF00007846609 fastq.gz 854.2 MB Report
26 Files (14.8 GB)