About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNA sequencing

RNAseq of 45 high-grade serous ovarian cancer tumour samples. Libraries were generated using the NEB Ultra II Directional RNA library Prep kit with polyA enrichment. Libraries were sequenced as paired-end 50 or 100bp on an Illumina NextSeq or NovaSeq.

Request Access

Peter MacCallum Cancer Centre Research Data Access Committee data access policy

1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. 3. The User Institution agrees to protect the confidentiality and privacy of Research Participants in any research papers or publications that they prepare by using their best efforts to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the User Institution that may arise (whether directly or indirectly) in any way whatsoever from the User Institution’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Authorship guide and the Toronto Statement. This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research relating to the Data. 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify Peter Mac within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify Peter Mac prior to any significant changes to the protocol for the Project. 14. The User Institution will notify Peter Mac as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Peter Mac may terminate this agreement by written notice to the User Institution at any time and for any reason or no reason. If this agreement is terminated, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than Peter Mac. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected by Peter Mac or its delegate to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of Victoria, Australia, and shall be subject to the exclusive jurisdiction of the Victorian courts. 20. The User Institution agrees that its rights and obligations hereunder are not assignable. 21. This agreement does not constitute any party the agent of another or imply that the parties intend constituting a partnership, joint venture or other form of association in which any party may be liable for the acts or omissions of the other.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006789 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007829287 fastq.gz 1.4 GB Report
EGAF00007829288 fastq.gz 1.4 GB Report
EGAF00007829289 fastq.gz 1.4 GB Report
EGAF00007829290 fastq.gz 1.5 GB Report
EGAF00007829291 fastq.gz 1.4 GB Report
EGAF00007829292 fastq.gz 1.5 GB Report
EGAF00007829293 fastq.gz 1.4 GB Report
EGAF00007829294 fastq.gz 1.5 GB Report
EGAF00007829295 fastq.gz 1.4 GB Report
EGAF00007829296 fastq.gz 1.5 GB Report
EGAF00007829297 fastq.gz 1.4 GB Report
EGAF00007829298 fastq.gz 1.5 GB Report
EGAF00007829299 fastq.gz 1.4 GB Report
EGAF00007829300 fastq.gz 1.5 GB Report
EGAF00007829301 fastq.gz 1.4 GB Report
EGAF00007829302 fastq.gz 1.5 GB Report
EGAF00007829303 fastq.gz 1.5 GB Report
EGAF00007829304 fastq.gz 1.5 GB Report
EGAF00007829305 fastq.gz 1.6 GB Report
EGAF00007829306 fastq.gz 1.6 GB Report
EGAF00007829307 fastq.gz 1.6 GB Report
EGAF00007829308 fastq.gz 1.6 GB Report
EGAF00007829309 fastq.gz 1.6 GB Report
EGAF00007829310 fastq.gz 1.6 GB Report
EGAF00007829311 fastq.gz 1.6 GB Report
EGAF00007829312 fastq.gz 1.6 GB Report
EGAF00007829313 fastq.gz 1.6 GB Report
EGAF00007829314 fastq.gz 1.6 GB Report
EGAF00007829315 fastq.gz 1.6 GB Report
EGAF00007829316 fastq.gz 1.6 GB Report
EGAF00007829317 fastq.gz 1.6 GB Report
EGAF00007829318 fastq.gz 1.7 GB Report
EGAF00007829319 fastq.gz 1.6 GB Report
EGAF00007829320 fastq.gz 1.7 GB Report
EGAF00007829321 fastq.gz 1.6 GB Report
EGAF00007829322 fastq.gz 1.7 GB Report
EGAF00007829323 fastq.gz 1.4 GB Report
EGAF00007829324 fastq.gz 1.5 GB Report
EGAF00007829325 fastq.gz 887.1 MB Report
EGAF00007829326 fastq.gz 900.8 MB Report
EGAF00007829327 fastq.gz 878.8 MB Report
EGAF00007829328 fastq.gz 883.7 MB Report
EGAF00007829329 fastq.gz 876.3 MB Report
EGAF00007829330 fastq.gz 882.9 MB Report
EGAF00007829331 fastq.gz 878.8 MB Report
EGAF00007829332 fastq.gz 888.1 MB Report
EGAF00007829333 fastq.gz 882.3 MB Report
EGAF00007829334 fastq.gz 893.0 MB Report
EGAF00007829335 fastq.gz 884.3 MB Report
EGAF00007829336 fastq.gz 893.0 MB Report
EGAF00007829337 fastq.gz 890.3 MB Report
EGAF00007829338 fastq.gz 903.9 MB Report
EGAF00007829339 fastq.gz 898.0 MB Report
EGAF00007829340 fastq.gz 914.4 MB Report
EGAF00007829341 fastq.gz 1.4 GB Report
EGAF00007829342 fastq.gz 1.5 GB Report
EGAF00007829343 fastq.gz 1.3 GB Report
EGAF00007829344 fastq.gz 1.3 GB Report
EGAF00007829345 fastq.gz 1.2 GB Report
EGAF00007829346 fastq.gz 1.2 GB Report
EGAF00007829347 fastq.gz 1.2 GB Report
EGAF00007829348 fastq.gz 1.3 GB Report
EGAF00007829349 fastq.gz 1.4 GB Report
EGAF00007829350 fastq.gz 1.4 GB Report
EGAF00007829351 fastq.gz 1.4 GB Report
EGAF00007829352 fastq.gz 1.4 GB Report
EGAF00007829353 fastq.gz 1.4 GB Report
EGAF00007829354 fastq.gz 1.4 GB Report
EGAF00007829355 fastq.gz 1.4 GB Report
EGAF00007829356 fastq.gz 1.4 GB Report
EGAF00007829357 fastq.gz 1.4 GB Report
EGAF00007829358 fastq.gz 1.4 GB Report
EGAF00007829359 fastq.gz 1.4 GB Report
EGAF00007829360 fastq.gz 1.4 GB Report
EGAF00007829361 fastq.gz 1.4 GB Report
EGAF00007829362 fastq.gz 1.4 GB Report
EGAF00007829363 fastq.gz 1.4 GB Report
EGAF00007829364 fastq.gz 1.4 GB Report
EGAF00007829365 fastq.gz 1.2 GB Report
EGAF00007829366 fastq.gz 1.2 GB Report
EGAF00007829367 fastq.gz 1.3 GB Report
EGAF00007829368 fastq.gz 1.3 GB Report
EGAF00007829369 fastq.gz 1.2 GB Report
EGAF00007829370 fastq.gz 1.3 GB Report
EGAF00007829371 fastq.gz 1.2 GB Report
EGAF00007829372 fastq.gz 1.2 GB Report
EGAF00007829373 fastq.gz 1.4 GB Report
EGAF00007829374 fastq.gz 1.4 GB Report
EGAF00007829375 fastq.gz 971.8 MB Report
EGAF00007829376 fastq.gz 965.0 MB Report
EGAF00007829377 fastq.gz 963.7 MB Report
EGAF00007829378 fastq.gz 945.5 MB Report
EGAF00007829379 fastq.gz 961.4 MB Report
EGAF00007829380 fastq.gz 946.7 MB Report
EGAF00007829381 fastq.gz 964.6 MB Report
EGAF00007829382 fastq.gz 953.8 MB Report
EGAF00007829383 fastq.gz 966.7 MB Report
EGAF00007829384 fastq.gz 958.2 MB Report
EGAF00007829385 fastq.gz 969.6 MB Report
EGAF00007829386 fastq.gz 959.0 MB Report
EGAF00007829387 fastq.gz 975.2 MB Report
EGAF00007829388 fastq.gz 969.6 MB Report
EGAF00007829389 fastq.gz 984.1 MB Report
EGAF00007829390 fastq.gz 983.6 MB Report
EGAF00007829391 fastq.gz 1.2 GB Report
EGAF00007829392 fastq.gz 1.3 GB Report
EGAF00007829393 fastq.gz 786.0 MB Report
EGAF00007829394 fastq.gz 790.2 MB Report
EGAF00007829395 fastq.gz 775.7 MB Report
EGAF00007829396 fastq.gz 777.2 MB Report
EGAF00007829397 fastq.gz 775.3 MB Report
EGAF00007829398 fastq.gz 777.3 MB Report
EGAF00007829399 fastq.gz 778.1 MB Report
EGAF00007829400 fastq.gz 782.2 MB Report
EGAF00007829401 fastq.gz 780.4 MB Report
EGAF00007829402 fastq.gz 786.7 MB Report
EGAF00007829403 fastq.gz 781.6 MB Report
EGAF00007829404 fastq.gz 785.9 MB Report
EGAF00007829405 fastq.gz 785.4 MB Report
EGAF00007829406 fastq.gz 794.3 MB Report
EGAF00007829407 fastq.gz 791.6 MB Report
EGAF00007829408 fastq.gz 802.6 MB Report
EGAF00007829409 fastq.gz 1.4 GB Report
EGAF00007829410 fastq.gz 1.5 GB Report
EGAF00007829411 fastq.gz 1.8 GB Report
EGAF00007829412 fastq.gz 1.9 GB Report
EGAF00007829413 fastq.gz 1.8 GB Report
EGAF00007829414 fastq.gz 1.8 GB Report
EGAF00007829415 fastq.gz 1.1 GB Report
EGAF00007829416 fastq.gz 1.1 GB Report
EGAF00007829417 fastq.gz 1.1 GB Report
EGAF00007829418 fastq.gz 1.1 GB Report
EGAF00007829419 fastq.gz 1.2 GB Report
EGAF00007829420 fastq.gz 1.3 GB Report
EGAF00007829421 fastq.gz 892.5 MB Report
EGAF00007829422 fastq.gz 921.8 MB Report
EGAF00007829423 fastq.gz 885.7 MB Report
EGAF00007829424 fastq.gz 906.0 MB Report
EGAF00007829425 fastq.gz 883.8 MB Report
EGAF00007829426 fastq.gz 904.8 MB Report
EGAF00007829427 fastq.gz 886.6 MB Report
EGAF00007829428 fastq.gz 910.5 MB Report
EGAF00007829429 fastq.gz 890.4 MB Report
EGAF00007829430 fastq.gz 915.2 MB Report
EGAF00007829431 fastq.gz 892.9 MB Report
EGAF00007829432 fastq.gz 915.5 MB Report
EGAF00007829433 fastq.gz 896.8 MB Report
EGAF00007829434 fastq.gz 924.9 MB Report
EGAF00007829435 fastq.gz 904.5 MB Report
EGAF00007829436 fastq.gz 935.5 MB Report
EGAF00007829437 fastq.gz 1.3 GB Report
EGAF00007829438 fastq.gz 1.4 GB Report
EGAF00007829439 fastq.gz 1.1 GB Report
EGAF00007829440 fastq.gz 1.2 GB Report
EGAF00007829441 fastq.gz 787.3 MB Report
EGAF00007829442 fastq.gz 810.6 MB Report
EGAF00007829443 fastq.gz 1.7 GB Report
EGAF00007829444 fastq.gz 1.8 GB Report
EGAF00007829445 fastq.gz 1.2 GB Report
EGAF00007829446 fastq.gz 1.2 GB Report
EGAF00007829447 fastq.gz 1.0 GB Report
EGAF00007829448 fastq.gz 1.1 GB Report
EGAF00007829449 fastq.gz 2.2 GB Report
EGAF00007829450 fastq.gz 2.3 GB Report
EGAF00007829451 fastq.gz 1.1 GB Report
EGAF00007829452 fastq.gz 1.1 GB Report
EGAF00007829453 fastq.gz 892.5 MB Report
EGAF00007829454 fastq.gz 935.5 MB Report
EGAF00007829455 fastq.gz 1.1 GB Report
EGAF00007829456 fastq.gz 1.1 GB Report
EGAF00007829457 fastq.gz 2.7 GB Report
EGAF00007829458 fastq.gz 2.9 GB Report
EGAF00007829459 fastq.gz 1.3 GB Report
EGAF00007829460 fastq.gz 1.4 GB Report
EGAF00007829461 fastq.gz 973.5 MB Report
EGAF00007829462 fastq.gz 1.0 GB Report
EGAF00007829463 fastq.gz 898.9 MB Report
EGAF00007829464 fastq.gz 931.9 MB Report
EGAF00007829465 fastq.gz 868.4 MB Report
EGAF00007829466 fastq.gz 899.4 MB Report
EGAF00007829467 fastq.gz 1.0 GB Report
EGAF00007829468 fastq.gz 1.1 GB Report
EGAF00007829469 fastq.gz 1.2 GB Report
EGAF00007829470 fastq.gz 1.3 GB Report
EGAF00007829471 fastq.gz 1.8 GB Report
EGAF00007829472 fastq.gz 1.8 GB Report
EGAF00007829473 fastq.gz 1.7 GB Report
EGAF00007829474 fastq.gz 1.8 GB Report
188 Files (231.2 GB)