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Genetic landscape of Extranodal NK/T-cell lymphoma

Whole-exome sequence (WES) data of tumor-normal pairs from 40 ENKTCL patients and RNA sequence (RNA-seq) data of tumors from 20 ENKTCL patients.

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Division of Molecular Oncology National Cancer Center Research Institute Data Access Committee DATA ACCESS AGREEMENT

Division of Molecular Oncology National Cancer Center Research Institute Data Access Committee DATA ACCESS AGREEMENT This Data Access Agreement (“Agreement”) governs the terms on which access will be granted to the genotype/expression array/sequence data generated by the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee. In signing this Agreement, the User agrees to be bound by the terms and conditions of access set out in this Agreement. For the sake of clarity, the terms of access set out in this Agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the Agreement as “You” and “Your” shall be construed accordingly. Definitions: Project team means Division of Molecular Oncology, National Cancer Center Research Institute, Tokyo, Japan. Data means all genetic data set of patients with extranodal NK/T-cell lymphoma, obtained from the Project team. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the Data or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the Data provided under this Agreement to other information or archive Data available for the data sets provided, even if access to that Data has been formally granted to You, or it is freely available without restriction, without specific permission being sought from the relevant access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outside the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the Data for the approved purpose and project described in Your application; use of the Data for a new purpose or project will require a new application and approval. 7. A Data access account using a non-institutional email address is established if You agree to notify EGA and the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee within 30 days of any changes of, or departures from the institution specified in Your application. 8. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 9. You agree to abide by the terms outlined in the Project team 'Publications Policy' as set out in Schedule 1. 10. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the Data, and the role of the Project team. Suitable wording is provided in the Publications Policy given in Schedule 1. 11. You accept that the Project team, the original Data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 12. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 13. You recognise that nothing in this Agreement shall operate to transfer to You any intellectual property rights relating to the Data. You have the right to develop intellectual property based on comparisons with Your own data. 14. You agree not to make intellectual property claims on the Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of the Data, or conclusion drawn directly from the Data. 15. You can elect to perform further research that would add intellectual and resource capital to the Data and decide to obtain intellectual property rights on these downstream discoveries. In this case, You agree to implement licensing policies that will not obstruct further research, and follow the U.S. National Institutes of Health’s, Best Practices for the Licensing of Genomic Inventions or a similar national guideline that is in conformity with the OECD, Guidelines for the Licensing of the Genetic Inventions. 16. You agree to notify the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee in writing of any new intellectual property. You agree to, on request, provide a non-exclusive, royalty-free licence to the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee for their own research and educational uses. 17. You accept that this Agreement will terminate immediately upon any breach of this Agreement by You and You will be required to destroy any Data held. 18. You accept that it may be necessary for the Project team or its appointed agent to alter the terms of this Agreement from time to time in order to address new concerns. In this event, the Project team or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 19. Access to the Data is granted for a period of 2 years. Where it is necessary to extend the period of access, You agree to contact the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee, in advance of the expiry of the period of access. At the end of the period of access, You agree to destroy all copies of the Data, except as required by publication practices or law to retain them. 20. You agree that You will submit a report to the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee, if requested, on completion of the agreed purpose. The Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to You. 21. You accept that the Data is protected by and subject to international laws and that You are responsible for ensuring compliance with any such applicable law. The Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in Japan. 22. This Agreement shall be governed by, and construed and interpreted under the laws of Japan. All dispute pertaining to this Agreement shall be subject to the exclusive jurisdiction of the Tokyo District Court of Japan for the first instance.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006906 Cancer Genomics
  • I have uploaded four additional sequencing data.
  • I have made corrections as there were some cases from a different dataset included.
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00007886157 bam 9.9 GB
EGAF00007886158 bam 9.8 GB
EGAF00007886159 bam 10.1 GB
EGAF00007886160 bam 11.5 GB
EGAF00007886161 bam 9.7 GB
EGAF00007886162 bam 9.5 GB
EGAF00007886163 bam 9.4 GB
EGAF00007886164 bam 6.3 GB
EGAF00007886165 bam 6.9 GB
EGAF00007886166 bam 11.5 GB
EGAF00007886167 bam 6.4 GB
EGAF00007886168 bam 7.6 GB
EGAF00007886169 bam 8.2 GB
EGAF00007886170 bam 8.2 GB
EGAF00007886171 bam 8.8 GB
EGAF00007886172 bam 8.4 GB
EGAF00007886173 bam 7.8 GB
EGAF00007886174 bam 11.1 GB
EGAF00007886175 bam 9.7 GB
EGAF00007886176 bam 9.8 GB
EGAF00007886177 bam 8.0 GB
EGAF00007886178 bam 8.7 GB
EGAF00007886179 bam 8.7 GB
EGAF00007886180 bam 7.6 GB
EGAF00007886181 bam 7.9 GB
EGAF00007886182 bam 11.5 GB
EGAF00007886183 bam 5.8 GB
EGAF00007886184 bam 21.6 GB
EGAF00007886185 bam 14.2 GB
EGAF00007886186 bam 7.8 GB
EGAF00007886187 bam 7.6 GB
EGAF00007886188 bam 22.1 GB
EGAF00007886189 bam 9.0 GB
EGAF00007886190 bam 8.0 GB
EGAF00007886191 bam 8.4 GB
EGAF00007886192 bam 7.6 GB
EGAF00007886193 bam 7.8 GB
EGAF00007886194 bam 8.6 GB
EGAF00007886195 bam 9.4 GB
EGAF00007886196 bam 6.6 GB
EGAF00007886197 bam 7.6 GB
EGAF00007886198 bam 14.4 GB
EGAF00007886199 bam 13.6 GB
EGAF00007886200 bam 7.9 GB
EGAF00007886201 bam 7.8 GB
EGAF00007886202 bam 8.0 GB
EGAF00007886203 bam 9.3 GB
EGAF00007886204 bam 9.8 GB
EGAF00007886205 bam 23.2 GB
EGAF00007886206 bam 13.0 GB
EGAF00007886207 bam 8.3 GB
EGAF00007886208 bam 11.3 GB
EGAF00007886209 bam 8.9 GB
EGAF00007886210 bam 9.1 GB
EGAF00007886211 bam 9.0 GB
EGAF00007886212 bam 7.8 GB
EGAF00007886213 bam 9.0 GB
EGAF00007886214 bam 11.0 GB
EGAF00007886215 bam 9.5 GB
EGAF00007886216 bam 9.4 GB
EGAF00007886217 bam 9.3 GB
EGAF00007886218 bam 8.8 GB
EGAF00007886219 bam 12.7 GB
EGAF00007886220 bam 10.1 GB
EGAF00007886221 bam 9.3 GB
EGAF00007886222 bam 9.1 GB
EGAF00007886223 bam 11.8 GB
EGAF00007886224 bam 10.3 GB
EGAF00007886225 bam 11.5 GB
EGAF00007886226 bam 8.8 GB
EGAF00007886227 bam 11.5 GB
EGAF00007886228 bam 10.7 GB
EGAF00007886229 bam 9.7 GB
EGAF00007886230 bam 9.1 GB
EGAF00007886231 bam 7.9 GB
EGAF00007886232 bam 12.8 GB
EGAF00007886233 bam 8.1 GB
EGAF00007886234 bam 7.9 GB
EGAF00007886235 bam 10.8 GB
EGAF00007886236 bam 9.7 GB
EGAF00007886237 bam 10.1 GB
EGAF00007886238 bam 11.5 GB
EGAF00007886239 bam 10.8 GB
EGAF00007886240 bam 14.3 GB
EGAF00007886241 bam 9.6 GB
EGAF00007886242 bam 9.5 GB
EGAF00007886243 bam 10.5 GB
EGAF00007886244 bam 9.6 GB
EGAF00007886245 bam 13.3 GB
EGAF00007886246 bam 13.2 GB
EGAF00007886247 bam 9.0 GB
EGAF00007886248 bam 12.0 GB
EGAF00007886249 bam 9.3 GB
EGAF00007886250 bam 9.6 GB
EGAF00007886251 bam 9.4 GB
EGAF00007886252 bam 9.4 GB
EGAF00007886253 bam 13.8 GB
EGAF00007886254 bam 9.8 GB
EGAF00007886255 bam 7.3 GB
EGAF00007886256 bam 8.0 GB
EGAF50000056381 bam 7.3 GB
EGAF50000056382 bam 8.1 GB
EGAF50000056383 bam 6.3 GB
EGAF50000056384 bam 9.3 GB
104 Files (1.0 TB)