About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNAseq data from NEN patient derived tumor organoids (PDTOs) and matched parental tumors - NKI/UMCU

The dataset includes fastq files from 15 NEN tumors or metastases and matched PDTOs. The sequencing was done with either a Nextseq 2000 or a NovaSeq 6000 instrument.

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Neuroendocrine neoplasm organoids project's data access policy - UMCU/NKI samples

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact dacdbg@umcutrecht.nl Following DUO codes are applied to the UMCU/NKI datasets: DUO_0000007; MONDO:0004992

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005752 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005686936 fastq.gz 5.5 GB Report
EGAF00005686937 fastq.gz 5.9 GB Report
EGAF00005686938 fastq.gz 3.2 GB Report
EGAF00005686939 fastq.gz 3.4 GB Report
EGAF00005686940 fastq.gz 6.2 GB Report
EGAF00005686941 fastq.gz 6.8 GB Report
EGAF00005686946 fastq.gz 7.0 GB Report
EGAF00005686947 fastq.gz 7.3 GB Report
EGAF00005686948 fastq.gz 6.2 GB Report
EGAF00005686949 fastq.gz 6.5 GB Report
EGAF00005686950 fastq.gz 6.0 GB Report
EGAF00005686951 fastq.gz 6.6 GB Report
EGAF00005686952 fastq.gz 6.0 GB Report
EGAF00005686953 fastq.gz 6.4 GB Report
EGAF00005686954 fastq.gz 6.3 GB Report
EGAF00005686955 fastq.gz 6.6 GB Report
EGAF00005686958 fastq.gz 5.1 GB Report
EGAF00005686959 fastq.gz 5.3 GB Report
EGAF00005686962 fastq.gz 5.1 GB Report
EGAF00005686963 fastq.gz 5.5 GB Report
EGAF00005686968 fastq.gz 5.4 GB Report
EGAF00005686969 fastq.gz 5.8 GB Report
EGAF00005686970 fastq.gz 6.0 GB Report
EGAF00005686971 fastq.gz 6.2 GB Report
EGAF00005686972 fastq.gz 5.9 GB Report
EGAF00005686973 fastq.gz 6.1 GB Report
EGAF00005686974 fastq.gz 6.7 GB Report
EGAF00005686975 fastq.gz 6.9 GB Report
EGAF00005686978 fastq.gz 7.4 GB Report
EGAF00005686979 fastq.gz 8.0 GB Report
EGAF00005686980 fastq.gz 6.3 GB Report
EGAF00005686981 fastq.gz 6.5 GB Report
EGAF00005686982 fastq.gz 5.3 GB Report
EGAF00005686983 fastq.gz 5.6 GB Report
EGAF00005686984 fastq.gz 5.6 GB Report
EGAF00005686985 fastq.gz 5.8 GB Report
EGAF00005686988 fastq.gz 6.1 GB Report
EGAF00005686989 fastq.gz 6.3 GB Report
EGAF00005686992 fastq.gz 6.3 GB Report
EGAF00005686993 fastq.gz 6.7 GB Report
EGAF00005686996 fastq.gz 7.5 GB Report
EGAF00005686997 fastq.gz 8.1 GB Report
EGAF00005687000 fastq.gz 6.6 GB Report
EGAF00005687001 fastq.gz 6.9 GB Report
EGAF00005687002 fastq.gz 6.7 GB Report
EGAF00005687003 fastq.gz 7.2 GB Report
EGAF00005687004 fastq.gz 6.3 GB Report
EGAF00005687005 fastq.gz 6.7 GB Report
EGAF00005687008 fastq.gz 6.7 GB Report
EGAF00005687009 fastq.gz 7.0 GB Report
EGAF00005687010 fastq.gz 6.5 GB Report
EGAF00005687011 fastq.gz 6.9 GB Report
EGAF00005687012 fastq.gz 5.8 GB Report
EGAF00005687013 fastq.gz 6.1 GB Report
EGAF00005687014 fastq.gz 5.4 GB Report
EGAF00005687015 fastq.gz 5.7 GB Report
EGAF00005687016 fastq.gz 4.8 GB Report
EGAF00005687017 fastq.gz 5.2 GB Report
EGAF00005687022 fastq.gz 6.6 GB Report
EGAF00005687023 fastq.gz 7.0 GB Report
EGAF00005687024 fastq.gz 6.1 GB Report
EGAF00005687025 fastq.gz 6.6 GB Report
62 Files (384.2 GB)