About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Whole genome, exome and RNA sequencing of TFCP2-rearranged rhabdomyosarcoma

Whole genome, exome and RNA sequencing of TFCP2-rearranged rhabdomyosarcoma, 86 samples of paired fastq files, sequenced on: Illumina HiSeq 2500 using Agilent SureSelect WGS, Illumina HiSeq 2500 using Illumina TruSeq RNA, Illumina HiSeq 2500 using Agilent SureSelect v5 WES (+UTRs), Illumina HiSeq 4000 using Agilent SureSelect WGS, Illumina HiSeq 4000 using Illumina TruSeq stranded mRNA Kit, Illumina HiSeq 4000 using Agilent SureSelect v5 WES stranded mRNA Kit, Illumina NovaSeq 6000 using Illumina TruSeq Stranded mRNA, Illumina NovaSeq 6000 using Illumina TruSeq Nano DNA, Illumina HiSeq X Ten using TruSeq Nano DNA.

Request Access

DUO:0000026
version: 2019-01-07

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006939 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007902222 fastq.gz 1.6 GB Report
EGAF00007902223 fastq.gz 1.7 GB Report
EGAF00007902224 fastq.gz 1.7 GB Report
EGAF00007902225 fastq.gz 1.8 GB Report
EGAF00007902226 fastq.gz 2.8 GB Report
EGAF00007902227 fastq.gz 2.9 GB Report
EGAF00007902228 fastq.gz 3.0 GB Report
EGAF00007902229 fastq.gz 3.1 GB Report
EGAF00007902230 fastq.gz 3.9 GB Report
EGAF00007902231 fastq.gz 4.2 GB Report
EGAF00007902232 fastq.gz 5.0 GB Report
EGAF00007902233 fastq.gz 5.4 GB Report
EGAF00007902234 fastq.gz 4.8 GB Report
EGAF00007902235 fastq.gz 5.2 GB Report
EGAF00007902236 fastq.gz 6.0 GB Report
EGAF00007902237 fastq.gz 6.5 GB Report
EGAF00007902238 fastq.gz 11.3 GB Report
EGAF00007902239 fastq.gz 12.3 GB Report
EGAF00007902240 fastq.gz 4.0 GB Report
EGAF00007902241 fastq.gz 4.2 GB Report
EGAF00007902242 fastq.gz 4.2 GB Report
EGAF00007902243 fastq.gz 4.4 GB Report
EGAF00007902244 fastq.gz 3.7 GB Report
EGAF00007902245 fastq.gz 4.0 GB Report
EGAF00007902246 fastq.gz 2.6 GB Report
EGAF00007902247 fastq.gz 2.8 GB Report
EGAF00007902248 fastq.gz 2.7 GB Report
EGAF00007902249 fastq.gz 3.0 GB Report
EGAF00007902250 fastq.gz 1.6 GB Report
EGAF00007902251 fastq.gz 1.6 GB Report
EGAF00007902252 fastq.gz 1.6 GB Report
EGAF00007902253 fastq.gz 1.7 GB Report
EGAF00007902254 fastq.gz 1.8 GB Report
EGAF00007902255 fastq.gz 1.9 GB Report
EGAF00007902256 fastq.gz 1.9 GB Report
EGAF00007902257 fastq.gz 2.0 GB Report
EGAF00007902258 fastq.gz 3.4 GB Report
EGAF00007902259 fastq.gz 3.6 GB Report
EGAF00007902260 fastq.gz 3.6 GB Report
EGAF00007902261 fastq.gz 3.9 GB Report
EGAF00007902262 fastq.gz 2.9 GB Report
EGAF00007902263 fastq.gz 3.1 GB Report
EGAF00007902264 fastq.gz 2.6 GB Report
EGAF00007902265 fastq.gz 2.7 GB Report
EGAF00007902266 fastq.gz 4.6 GB Report
EGAF00007902267 fastq.gz 5.1 GB Report
EGAF00007912924 fastq.gz 3.6 GB Report
EGAF00007912925 fastq.gz 3.9 GB Report
EGAF00007912926 fastq.gz 6.2 GB Report
EGAF00007912927 fastq.gz 6.7 GB Report
EGAF00007912928 fastq.gz 3.2 GB Report
EGAF00007912929 fastq.gz 3.7 GB Report
EGAF00007912930 fastq.gz 4.3 GB Report
EGAF00007912931 fastq.gz 4.9 GB Report
EGAF00007912932 fastq.gz 4.8 GB Report
EGAF00007912933 fastq.gz 5.4 GB Report
EGAF00007912934 fastq.gz 6.7 GB Report
EGAF00007912935 fastq.gz 7.5 GB Report
EGAF00007912936 fastq.gz 2.7 GB Report
EGAF00007912937 fastq.gz 2.8 GB Report
EGAF00007912938 fastq.gz 2.7 GB Report
EGAF00007912939 fastq.gz 2.8 GB Report
EGAF00007912940 fastq.gz 3.8 GB Report
EGAF00007912941 fastq.gz 3.9 GB Report
EGAF00007912942 fastq.gz 3.8 GB Report
EGAF00007912943 fastq.gz 3.9 GB Report
EGAF00007912944 fastq.gz 1.6 GB Report
EGAF00007912945 fastq.gz 1.6 GB Report
EGAF00007912946 fastq.gz 1.6 GB Report
EGAF00007912947 fastq.gz 1.6 GB Report
EGAF00007912948 fastq.gz 5.4 GB Report
EGAF00007912949 fastq.gz 5.8 GB Report
EGAF00007912950 fastq.gz 3.3 GB Report
EGAF00007912951 fastq.gz 3.4 GB Report
EGAF00007912952 fastq.gz 3.4 GB Report
EGAF00007912953 fastq.gz 3.6 GB Report
EGAF00007912954 fastq.gz 3.3 GB Report
EGAF00007912955 fastq.gz 3.8 GB Report
EGAF00007912956 fastq.gz 3.3 GB Report
EGAF00007912957 fastq.gz 3.8 GB Report
EGAF00007912958 fastq.gz 7.0 GB Report
EGAF00007912959 fastq.gz 7.5 GB Report
EGAF00007912960 fastq.gz 5.7 GB Report
EGAF00007912961 fastq.gz 6.1 GB Report
EGAF00007912962 fastq.gz 1.8 GB Report
EGAF00007912963 fastq.gz 2.1 GB Report
EGAF00007912964 fastq.gz 1.9 GB Report
EGAF00007912965 fastq.gz 2.2 GB Report
EGAF00007912966 fastq.gz 1.6 GB Report
EGAF00007912967 fastq.gz 1.9 GB Report
EGAF00007912968 fastq.gz 3.5 GB Report
EGAF00007912969 fastq.gz 3.6 GB Report
EGAF00007912970 fastq.gz 3.4 GB Report
EGAF00007912971 fastq.gz 3.5 GB Report
EGAF00007912972 fastq.gz 4.5 GB Report
EGAF00007912973 fastq.gz 4.8 GB Report
EGAF00007912974 fastq.gz 40.2 GB Report
EGAF00007912975 fastq.gz 43.4 GB Report
EGAF00007912976 fastq.gz 40.5 GB Report
EGAF00007912977 fastq.gz 42.6 GB Report
EGAF00007912978 fastq.gz 40.0 GB
EGAF00007912978 fastq.gz 40.0 GB Report
EGAF00007912979 fastq.gz 42.1 GB Report
EGAF00007912980 fastq.gz 39.6 GB Report
EGAF00007912981 fastq.gz 43.0 GB Report
EGAF00007912982 fastq.gz 16.5 GB Report
EGAF00007912983 fastq.gz 17.1 GB Report
EGAF00007912984 fastq.gz 16.4 GB Report
EGAF00007912985 fastq.gz 16.8 GB Report
EGAF00007912986 fastq.gz 16.2 GB Report
EGAF00007912987 fastq.gz 16.6 GB Report
EGAF00007912988 fastq.gz 16.3 GB Report
EGAF00007912989 fastq.gz 16.7 GB Report
EGAF00007912990 fastq.gz 18.5 GB Report
EGAF00007912991 fastq.gz 19.0 GB Report
EGAF00007912992 fastq.gz 18.2 GB Report
EGAF00007912993 fastq.gz 18.6 GB Report
EGAF00007912994 fastq.gz 18.2 GB Report
EGAF00007912995 fastq.gz 18.6 GB Report
EGAF00007912996 fastq.gz 18.3 GB Report
EGAF00007912997 fastq.gz 18.7 GB Report
EGAF00007912998 fastq.gz 23.4 GB Report
EGAF00007912999 fastq.gz 24.3 GB Report
EGAF00007913000 fastq.gz 23.0 GB Report
EGAF00007913001 fastq.gz 23.9 GB Report
EGAF00007913002 fastq.gz 22.9 GB Report
EGAF00007913003 fastq.gz 23.6 GB Report
EGAF00007913004 fastq.gz 22.9 GB Report
EGAF00007913005 fastq.gz 23.5 GB Report
EGAF00007913006 fastq.gz 17.5 GB Report
EGAF00007913007 fastq.gz 18.1 GB Report
EGAF00007913008 fastq.gz 17.4 GB Report
EGAF00007913009 fastq.gz 18.0 GB Report
EGAF00007913010 fastq.gz 16.9 GB Report
EGAF00007913011 fastq.gz 17.3 GB Report
EGAF00007913012 fastq.gz 16.8 GB Report
EGAF00007913013 fastq.gz 17.1 GB Report
EGAF00007913014 fastq.gz 37.1 GB Report
EGAF00007913015 fastq.gz 41.7 GB Report
EGAF00007913016 fastq.gz 37.4 GB Report
EGAF00007913017 fastq.gz 42.8 GB Report
EGAF00007913018 fastq.gz 39.0 GB Report
EGAF00007913019 fastq.gz 43.3 GB Report
EGAF00007913020 fastq.gz 37.7 GB Report
EGAF00007913021 fastq.gz 42.2 GB Report
EGAF00007913022 fastq.gz 37.8 GB Report
EGAF00007913023 fastq.gz 43.0 GB Report
EGAF00007913024 fastq.gz 37.5 GB Report
EGAF00007913025 fastq.gz 42.4 GB Report
EGAF00007913026 fastq.gz 38.8 GB Report
EGAF00007913027 fastq.gz 40.9 GB Report
EGAF00007913028 fastq.gz 38.9 GB Report
EGAF00007913029 fastq.gz 41.1 GB Report
EGAF00007913030 fastq.gz 41.1 GB Report
EGAF00007913031 fastq.gz 41.7 GB Report
EGAF00007913032 fastq.gz 42.2 GB Report
EGAF00007913033 fastq.gz 44.1 GB Report
EGAF00007913034 fastq.gz 37.1 GB Report
EGAF00007913035 fastq.gz 39.5 GB Report
EGAF00007913036 fastq.gz 37.3 GB Report
EGAF00007913037 fastq.gz 39.1 GB Report
EGAF00007913038 fastq.gz 37.6 GB Report
EGAF00007913039 fastq.gz 39.1 GB Report
EGAF00007913040 fastq.gz 37.3 GB Report
EGAF00007913041 fastq.gz 39.1 GB Report
EGAF00007913042 fastq.gz 41.7 GB Report
EGAF00007913043 fastq.gz 44.2 GB Report
EGAF00007913044 fastq.gz 41.8 GB Report
EGAF00007913045 fastq.gz 45.1 GB Report
EGAF00007913046 fastq.gz 41.2 GB Report
EGAF00007913047 fastq.gz 40.6 GB Report
EGAF00007913048 fastq.gz 41.2 GB Report
EGAF00007913049 fastq.gz 40.5 GB Report
173 Files (2.8 TB)