sWGS data of Pap test smears and tumor tissues
Shallow whole-genome sequencing data divided into three groups: - sWGS data from Pap smears of patients with confirmed high grade serous ovarian cancer - sWGS data from matched tumor tissue (at diagnosis) from the same patients - sWGS data from Pap tests smears of healthy women
- 17/03/2023
- 186 samples
- DAC: EGAC00001002915
- Technology: NextSeq 550
Please forward enquiries to Prof.Maurizio D'Incalci with a document describing the planned project and usage of the samples.
Please forward enquiries to Prof.Maurizio D'Incalci with a document describing the planned project and usage of the samples. The document should explain at least succintly in what project the samples will be used and the role of the requested data set in said project, including the type of analyses planned.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001007084 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00007978336 | bam | 2.4 GB | Report |
|
| EGAF00007978337 | bam | 2.2 GB | Report |
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| EGAF00007978338 | bam | 1.5 GB | Report |
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| EGAF00007978339 | bam | 4.0 GB | Report |
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| EGAF00007978340 | bam | 2.2 GB | Report |
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| EGAF00007978341 | bam | 2.5 GB | Report |
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| EGAF00007978342 | bam | 4.2 GB | Report |
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| EGAF00007978343 | bam | 1.7 GB | Report |
|
| EGAF00007978344 | bam | 3.0 GB | Report |
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| EGAF00007978345 | bam | 3.7 GB | Report |
|
| EGAF00007978346 | bam | 9.1 GB | Report |
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| EGAF00007978347 | bam | 4.9 GB | Report |
|
| EGAF00007978348 | bam | 2.5 GB | Report |
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| EGAF00007978349 | bam | 4.1 GB | Report |
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| EGAF00007978350 | bam | 4.2 GB | Report |
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| EGAF00007978351 | bam | 2.1 GB | Report |
|
| EGAF00007978352 | bam | 1.5 GB | Report |
|
| EGAF00007978353 | bam | 7.1 GB | Report |
|
| EGAF00007978354 | bam | 3.6 GB | Report |
|
| EGAF00007978355 | bam | 2.8 GB | Report |
|
| EGAF00007978356 | bam | 4.6 GB | Report |
|
| EGAF00007978357 | bam | 2.9 GB | Report |
|
| EGAF00007978358 | bam | 3.5 GB | Report |
|
| EGAF00007978359 | bam | 4.0 GB | Report |
|
| EGAF00007978360 | bam | 3.6 GB | Report |
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| EGAF00007978361 | bam | 5.5 GB | Report |
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| EGAF00007978362 | bam | 5.9 GB | Report |
|
| EGAF00007978363 | bam | 1.3 GB | Report |
|
| EGAF00007978364 | bam | 2.4 GB | Report |
|
| EGAF00007978365 | bam | 2.9 GB | Report |
|
| EGAF00007978366 | bam | 1.7 GB | Report |
|
| EGAF00007978367 | bam | 2.4 GB | Report |
|
| EGAF00007978368 | bam | 3.2 GB | Report |
|
| EGAF00007978369 | bam | 1.7 GB | Report |
|
| EGAF00007978370 | bam | 3.0 GB | Report |
|
| EGAF00007978371 | bam | 1.1 GB | Report |
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| EGAF00007978372 | bam | 3.7 GB | Report |
|
| EGAF00007978373 | bam | 1.9 GB | Report |
|
| EGAF00007978374 | bam | 3.6 GB | Report |
|
| EGAF00007978375 | bam | 1.3 GB | Report |
|
| EGAF00007978376 | bam | 3.5 GB | Report |
|
| EGAF00007978377 | bam | 3.4 GB | Report |
|
| EGAF00007978378 | bam | 2.2 GB | Report |
|
| EGAF00007978379 | bam | 3.5 GB | Report |
|
| EGAF00007978380 | bam | 1.9 GB | Report |
|
| EGAF00007978381 | bam | 4.2 GB | Report |
|
| EGAF00007978382 | bam | 336.4 MB | Report |
|
| EGAF00007978383 | bam | 1.6 GB | Report |
|
| EGAF00007978384 | bam | 1.8 GB | Report |
|
| EGAF00007978385 | bam | 379.0 MB | Report |
|
| EGAF00007978386 | bam | 4.0 GB | Report |
|
| EGAF00007978387 | bam | 4.2 GB | Report |
|
| EGAF00007978388 | bam | 400.8 MB | Report |
|
| EGAF00007978389 | bam | 2.1 GB | Report |
|
| EGAF00007978390 | bam | 826.9 MB | Report |
|
| EGAF00007978391 | bam | 2.5 GB | Report |
|
| EGAF00007978392 | bam | 480.1 MB | Report |
|
| EGAF00007978393 | bam | 354.2 MB | Report |
|
| EGAF00007978394 | bam | 2.2 GB | Report |
|
| EGAF00007978395 | bam | 4.0 GB | Report |
|
| EGAF00007978396 | bam | 694.6 MB | Report |
|
| EGAF00007978397 | bam | 3.1 GB | Report |
|
| EGAF00007978398 | bam | 2.1 GB | Report |
|
| EGAF00007978399 | bam | 2.0 GB | Report |
|
| EGAF00007978400 | bam | 1.1 GB | Report |
|
| EGAF00007978401 | bam | 1.6 GB | Report |
|
| EGAF00007978402 | bam | 656.6 MB | Report |
|
| EGAF00007978403 | bam | 2.7 GB | Report |
|
| EGAF00007978404 | bam | 353.6 MB | Report |
|
| EGAF00007978405 | bam | 1.2 GB | Report |
|
| EGAF00007978406 | bam | 1.3 GB | Report |
|
| EGAF00007978407 | bam | 850.9 MB | Report |
|
| EGAF00007978408 | bam | 2.5 GB | Report |
|
| EGAF00007978409 | bam | 2.3 GB | Report |
|
| EGAF00007978410 | bam | 722.1 MB | Report |
|
| EGAF00007978411 | bam | 1.9 GB | Report |
|
| EGAF00007978412 | bam | 3.6 GB | Report |
|
| EGAF00007978413 | bam | 676.2 MB | Report |
|
| EGAF00007978414 | bam | 3.0 GB | Report |
|
| EGAF00007978415 | bam | 2.1 GB | Report |
|
| EGAF00007978416 | bam | 760.5 MB | Report |
|
| EGAF00007978417 | bam | 1.5 GB | Report |
|
| EGAF00007978418 | bam | 4.5 GB | Report |
|
| EGAF00007978419 | bam | 618.2 MB | Report |
|
| EGAF00007978420 | bam | 1.4 GB | Report |
|
| EGAF00007978421 | bam | 616.1 MB | Report |
|
| EGAF00007978422 | bam | 3.0 GB | Report |
|
| EGAF00007978423 | bam | 1.3 GB | Report |
|
| EGAF00007978424 | bam | 2.0 GB | Report |
|
| EGAF00007978425 | bam | 4.7 GB | Report |
|
| EGAF00007978426 | bam | 1.4 GB | Report |
|
| EGAF00007978427 | bam | 3.1 GB | Report |
|
| EGAF00007978428 | bam | 645.0 MB | Report |
|
| EGAF00007978429 | bam | 2.4 GB | Report |
|
| EGAF00007978430 | bam | 623.9 MB | Report |
|
| EGAF00007978431 | bam | 2.6 GB | Report |
|
| EGAF00007978432 | bam | 4.3 GB | Report |
|
| EGAF00007978433 | bam | 1.6 GB | Report |
|
| EGAF00007978434 | bam | 2.4 GB | Report |
|
| EGAF00007978435 | bam | 1.3 GB | Report |
|
| EGAF00007978436 | bam | 2.9 GB | Report |
|
| EGAF00007978437 | bam | 1.3 GB | Report |
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| EGAF00007978438 | bam | 2.1 GB | Report |
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| EGAF00007978439 | bam | 2.5 GB | Report |
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| EGAF00007978440 | bam | 1.3 GB | Report |
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| EGAF00007978441 | bam | 2.3 GB | Report |
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| EGAF00007978442 | bam | 1.3 GB | Report |
|
| EGAF00007978443 | bam | 2.9 GB | Report |
|
| EGAF00007978444 | bam | 2.0 GB | Report |
|
| EGAF00007978445 | bam | 2.6 GB | Report |
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| EGAF00007978446 | bam | 2.2 GB | Report |
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| EGAF00007978447 | bam | 3.9 GB | Report |
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| EGAF00007978448 | bam | 1.5 GB | Report |
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| EGAF00007978449 | bam | 2.0 GB | Report |
|
| EGAF00007978450 | bam | 2.7 GB | Report |
|
| EGAF00007978451 | bam | 2.3 GB | Report |
|
| EGAF00007978452 | bam | 2.7 GB | Report |
|
| EGAF00007978453 | bam | 1.8 GB | Report |
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| EGAF00007978454 | bam | 3.3 GB | Report |
|
| EGAF00007978455 | bam | 3.5 GB | Report |
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| EGAF00007978456 | bam | 2.4 GB | Report |
|
| EGAF00007978457 | bam | 5.0 GB | Report |
|
| EGAF00007978458 | bam | 1.6 GB | Report |
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| EGAF00007978459 | bam | 2.2 GB | Report |
|
| EGAF00007978460 | bam | 2.0 GB | Report |
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| EGAF00007978461 | bam | 3.0 GB | Report |
|
| EGAF00007978462 | bam | 1.8 GB | Report |
|
| EGAF00007978463 | bam | 6.1 GB | Report |
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| EGAF00007978464 | bam | 2.1 GB | Report |
|
| EGAF00007978465 | bam | 2.1 GB | Report |
|
| EGAF00007978466 | bam | 2.8 GB | Report |
|
| EGAF00007978467 | bam | 2.6 GB | Report |
|
| EGAF00007978468 | bam | 2.3 GB | Report |
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| EGAF00007978469 | bam | 1.8 GB | Report |
|
| EGAF00007978470 | bam | 1.6 GB | Report |
|
| EGAF00007978471 | bam | 3.1 GB | Report |
|
| EGAF00007978472 | bam | 1.7 GB | Report |
|
| EGAF00007978473 | bam | 4.4 GB | Report |
|
| EGAF00007978474 | bam | 2.0 GB | Report |
|
| EGAF00007978475 | bam | 2.1 GB | Report |
|
| EGAF00007978476 | bam | 2.8 GB | Report |
|
| EGAF00007978477 | bam | 4.2 GB | Report |
|
| EGAF00007978478 | bam | 3.1 GB | Report |
|
| EGAF00007978479 | bam | 2.6 GB | Report |
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| EGAF00007978480 | bam | 1.9 GB | Report |
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| EGAF00007978481 | bam | 2.3 GB | Report |
|
| EGAF00007978482 | bam | 1.9 GB | Report |
|
| EGAF00007978483 | bam | 2.5 GB | Report |
|
| EGAF00007978484 | bam | 6.2 GB | Report |
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| EGAF00007978485 | bam | 3.8 GB | Report |
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| EGAF00007978486 | bam | 3.6 GB | Report |
|
| EGAF00007978487 | bam | 2.0 GB | Report |
|
| EGAF00007978488 | bam | 1.9 GB | Report |
|
| EGAF00007978489 | bam | 2.3 GB | Report |
|
| EGAF00007978490 | bam | 4.1 GB | Report |
|
| EGAF00007978491 | bam | 3.2 GB | Report |
|
| EGAF00007978492 | bam | 2.1 GB | Report |
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| EGAF00007978493 | bam | 1.7 GB | Report |
|
| EGAF00007978494 | bam | 3.4 GB | Report |
|
| EGAF00007978495 | bam | 2.8 GB | Report |
|
| EGAF00007978496 | bam | 1.4 GB | Report |
|
| EGAF00007978497 | bam | 3.8 GB | Report |
|
| EGAF00007978498 | bam | 3.8 GB | Report |
|
| EGAF00007978499 | bam | 2.7 GB | Report |
|
| EGAF00007978500 | bam | 2.2 GB | Report |
|
| EGAF00007978501 | bam | 2.4 GB | Report |
|
| EGAF00007978502 | bam | 576.4 MB | Report |
|
| EGAF00007978503 | bam | 513.2 MB | Report |
|
| EGAF00007978504 | bam | 1.4 GB | Report |
|
| EGAF00007978505 | bam | 728.8 MB | Report |
|
| EGAF00007978506 | bam | 1.2 GB | Report |
|
| EGAF00007978507 | bam | 335.9 MB | Report |
|
| EGAF00007978508 | bam | 1.6 GB | Report |
|
| EGAF00007978509 | bam | 1.3 GB | Report |
|
| EGAF00007978510 | bam | 961.4 MB | Report |
|
| EGAF00007978511 | bam | 1.3 GB | Report |
|
| EGAF00007978512 | bam | 936.4 MB | Report |
|
| EGAF00007978513 | bam | 696.8 MB | Report |
|
| EGAF00007978514 | bam | 582.5 MB | Report |
|
| EGAF00007978515 | bam | 935.0 MB | Report |
|
| EGAF00007978516 | bam | 871.2 MB | Report |
|
| EGAF00007978517 | bam | 943.9 MB | Report |
|
| EGAF00007978518 | bam | 722.1 MB | Report |
|
| EGAF00007978519 | bam | 950.8 MB | Report |
|
| EGAF00007978520 | bam | 699.4 MB | Report |
|
| EGAF00007978521 | bam | 690.4 MB | Report |
|
| 186 Files (440.9 GB) | ||||