About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WES and RNA-seq data of 11 cancer patients with multiple cancer types

This dataset includes WES and RNAseq from 11 patients with metastatic melanoma, lung, kidney, and stomach cancers, enrolled in phase I clinical trials of TIL ACT (NCT03475134 & NCT04643574). WES was performed on matched cancer and healthy samples, whereas RNAseq was performed on cancer tissues, using Illumina HiSeq 2500/4000 and Illumina NextSeq 550 systems. Paired-end reads are provided in fastq format.

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Terms and conditions for the data download and usage

If you wish to download the data, please contact the data access committee for the "Data Transfer and Use Agreement" form, which sets the terms and conditions for the data download and usage.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007101 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007986041 fastq.gz 4.4 GB Report
EGAF00007986042 fastq.gz 4.5 GB Report
EGAF00007986043 fastq.gz 9.8 GB Report
EGAF00007986044 fastq.gz 10.4 GB Report
EGAF00007986045 fastq.gz 4.2 GB Report
EGAF00007986046 fastq.gz 4.2 GB Report
EGAF00007986047 fastq.gz 10.4 GB Report
EGAF00007986048 fastq.gz 11.1 GB Report
EGAF00007986049 fastq.gz 4.1 GB Report
EGAF00007986050 fastq.gz 4.1 GB Report
EGAF00007986051 fastq.gz 10.2 GB Report
EGAF00007986052 fastq.gz 10.8 GB Report
EGAF00007986053 fastq.gz 3.5 GB Report
EGAF00007986054 fastq.gz 3.5 GB Report
EGAF00007986055 fastq.gz 4.2 GB Report
EGAF00007986056 fastq.gz 4.3 GB Report
EGAF00007986057 fastq.gz 7.8 GB Report
EGAF00007986058 fastq.gz 8.0 GB Report
EGAF00007986059 fastq.gz 3.1 GB Report
EGAF00007986060 fastq.gz 3.1 GB Report
EGAF00007986061 fastq.gz 4.6 GB Report
EGAF00007986062 fastq.gz 4.6 GB Report
EGAF00007986063 fastq.gz 3.9 GB Report
EGAF00007986064 fastq.gz 4.0 GB Report
EGAF00007986065 fastq.gz 2.2 GB Report
EGAF00007986066 fastq.gz 2.2 GB Report
EGAF00007986067 fastq.gz 5.3 GB Report
EGAF00007986068 fastq.gz 5.4 GB Report
EGAF00007986069 fastq.gz 6.2 GB Report
EGAF00007986070 fastq.gz 6.3 GB Report
EGAF00007986071 fastq.gz 1.8 GB Report
EGAF00007986072 fastq.gz 1.8 GB Report
EGAF00007986073 fastq.gz 4.7 GB Report
EGAF00007986074 fastq.gz 4.7 GB Report
EGAF00007986075 fastq.gz 1.2 GB Report
EGAF00007986076 fastq.gz 1.3 GB Report
EGAF00007986077 fastq.gz 3.3 GB Report
EGAF00007986078 fastq.gz 3.3 GB Report
EGAF00007986079 fastq.gz 2.9 GB Report
EGAF00007986080 fastq.gz 3.0 GB Report
EGAF00007986081 fastq.gz 5.1 GB Report
EGAF00007986082 fastq.gz 5.2 GB Report
EGAF00007986083 fastq.gz 3.2 GB Report
EGAF00007986084 fastq.gz 3.2 GB Report
EGAF00007986085 fastq.gz 10.5 GB Report
EGAF00007986086 fastq.gz 10.6 GB Report
EGAF00007986087 fastq.gz 3.2 GB Report
EGAF00007986088 fastq.gz 3.2 GB Report
EGAF00007986089 fastq.gz 10.6 GB Report
EGAF00007986090 fastq.gz 10.8 GB Report
EGAF00007986091 fastq.gz 2.5 GB Report
EGAF00007986092 fastq.gz 2.5 GB Report
EGAF00007986093 fastq.gz 7.0 GB Report
EGAF00007986094 fastq.gz 7.3 GB Report
EGAF00007986095 fastq.gz 1.2 GB Report
EGAF00007986096 fastq.gz 1.3 GB Report
EGAF00007986097 fastq.gz 14.6 GB Report
EGAF00007986098 fastq.gz 14.9 GB Report
EGAF00007986099 fastq.gz 2.2 GB Report
EGAF00007986100 fastq.gz 2.3 GB Report
EGAF00007986101 fastq.gz 2.3 GB Report
EGAF00007986102 fastq.gz 2.3 GB Report
EGAF00007986103 fastq.gz 12.5 GB Report
EGAF00007986104 fastq.gz 13.2 GB Report
EGAF00007986105 fastq.gz 2.5 GB Report
EGAF00007986106 fastq.gz 2.5 GB Report
EGAF00007986107 fastq.gz 3.2 GB Report
EGAF00007986108 fastq.gz 3.3 GB Report
EGAF00007986109 fastq.gz 6.7 GB Report
EGAF00007986110 fastq.gz 6.8 GB Report
EGAF00007986111 fastq.gz 2.6 GB Report
EGAF00007986112 fastq.gz 2.7 GB Report
EGAF00007986113 fastq.gz 6.6 GB Report
EGAF00007986114 fastq.gz 6.7 GB Report
EGAF00007986115 fastq.gz 2.7 GB Report
EGAF00007986116 fastq.gz 2.7 GB Report
EGAF00007986117 fastq.gz 6.3 GB Report
EGAF00007986118 fastq.gz 6.4 GB Report
EGAF00007986119 fastq.gz 2.7 GB Report
EGAF00007986120 fastq.gz 2.6 GB Report
EGAF00007986121 fastq.gz 3.0 GB Report
EGAF00007986122 fastq.gz 3.1 GB Report
EGAF00007986123 fastq.gz 11.1 GB Report
EGAF00007986124 fastq.gz 11.4 GB Report
EGAF00007986125 fastq.gz 3.1 GB Report
EGAF00007986126 fastq.gz 3.2 GB Report
EGAF00007986127 fastq.gz 13.6 GB Report
EGAF00007986128 fastq.gz 14.0 GB Report
EGAF00007986129 fastq.gz 3.0 GB Report
EGAF00007986130 fastq.gz 3.0 GB Report
EGAF00007986131 fastq.gz 12.2 GB Report
EGAF00007986132 fastq.gz 12.6 GB Report
EGAF00007986133 fastq.gz 2.0 GB Report
EGAF00007986134 fastq.gz 2.0 GB Report
EGAF00007986135 fastq.gz 4.4 GB Report
EGAF00007986136 fastq.gz 4.4 GB Report
EGAF00007986137 fastq.gz 2.4 GB Report
EGAF00007986138 fastq.gz 2.5 GB Report
EGAF00007986139 fastq.gz 13.2 GB Report
EGAF00007986140 fastq.gz 13.5 GB Report
EGAF00007986141 fastq.gz 14.7 GB Report
EGAF00007986142 fastq.gz 14.9 GB Report
EGAF00007986143 fastq.gz 5.1 GB Report
EGAF00007986144 fastq.gz 5.2 GB Report
104 Files (594.5 GB)