About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Exome sequencing data

Libraries were constructed using SureSelect HS XT Target Enrichment System v6 (Agilent). For each patient a library of CD3- cells (myeloid cells, considered tumor cells) and CD3+ cells (T cells, considered healthy) were generated.

Request Access

Research use only. Project specific restriction

We will share data for scientific research upon reasonably justified requests. Research with the goal of identifying characteristics of the patient not related to the leukemia (such as surname inference and ancestry research) are excluded. The use of the data for projects not related to cancer research is excluded, exceptions may apply in the context of research aiming to develop new bioinformatics methods. Data cannot be made available to 3rd parties and must be stored in an institutional compute system behind a firewall and without world read access; if stored on portable devices, data must be encrypted. Users must present a signed Data Access Agreement available upon request. Terms of the DAA are not negotiable.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007078 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008003220 fastq.gz 2.8 GB Report
EGAF00008003221 fastq.gz 2.8 GB Report
EGAF00008003222 fastq.gz 5.7 GB Report
EGAF00008003223 fastq.gz 5.7 GB Report
EGAF00008003224 fastq.gz 4.0 GB Report
EGAF00008003225 fastq.gz 4.1 GB Report
EGAF00008003226 fastq.gz 8.4 GB Report
EGAF00008003227 fastq.gz 8.6 GB Report
EGAF00008003228 fastq.gz 3.2 GB Report
EGAF00008003229 fastq.gz 3.4 GB Report
EGAF00008003230 fastq.gz 6.2 GB Report
EGAF00008003231 fastq.gz 6.5 GB Report
EGAF00008003232 fastq.gz 3.3 GB Report
EGAF00008003233 fastq.gz 3.4 GB Report
EGAF00008003234 fastq.gz 3.3 GB Report
EGAF00008003235 fastq.gz 3.3 GB Report
EGAF00008003236 fastq.gz 3.2 GB Report
EGAF00008003237 fastq.gz 3.4 GB Report
EGAF00008003238 fastq.gz 6.3 GB Report
EGAF00008003239 fastq.gz 6.7 GB Report
EGAF00008003240 fastq.gz 3.7 GB Report
EGAF00008003241 fastq.gz 3.8 GB Report
EGAF00008003242 fastq.gz 8.6 GB Report
EGAF00008003243 fastq.gz 8.8 GB Report
EGAF00008003244 fastq.gz 3.6 GB Report
EGAF00008003245 fastq.gz 3.6 GB Report
EGAF00008003246 fastq.gz 6.2 GB Report
EGAF00008003247 fastq.gz 6.2 GB Report
EGAF00008003248 fastq.gz 2.7 GB Report
EGAF00008003249 fastq.gz 2.7 GB Report
EGAF00008003250 fastq.gz 5.6 GB Report
EGAF00008003251 fastq.gz 5.7 GB Report
EGAF00008003252 fastq.gz 6.4 GB Report
EGAF00008003253 fastq.gz 6.8 GB Report
EGAF00008003254 fastq.gz 12.8 GB Report
EGAF00008003255 fastq.gz 13.4 GB Report
EGAF00008003256 fastq.gz 3.7 GB Report
EGAF00008003257 fastq.gz 4.0 GB Report
EGAF00008003258 fastq.gz 6.8 GB Report
EGAF00008003259 fastq.gz 7.1 GB Report
EGAF00008003260 fastq.gz 7.0 GB Report
EGAF00008003261 fastq.gz 7.4 GB Report
EGAF00008003262 fastq.gz 13.6 GB Report
EGAF00008003263 fastq.gz 14.4 GB Report
EGAF00008003264 fastq.gz 6.6 GB Report
EGAF00008003265 fastq.gz 6.9 GB Report
EGAF00008003266 fastq.gz 13.0 GB Report
EGAF00008003267 fastq.gz 13.7 GB Report
EGAF00008003268 fastq.gz 3.5 GB Report
EGAF00008003269 fastq.gz 3.5 GB Report
EGAF00008003270 fastq.gz 6.4 GB Report
EGAF00008003271 fastq.gz 6.5 GB Report
EGAF00008003272 fastq.gz 2.9 GB Report
EGAF00008003273 fastq.gz 2.9 GB Report
EGAF00008003274 fastq.gz 5.2 GB Report
EGAF00008003275 fastq.gz 5.2 GB Report
EGAF00008003276 fastq.gz 3.8 GB Report
EGAF00008003277 fastq.gz 4.0 GB Report
EGAF00008003278 fastq.gz 8.5 GB Report
EGAF00008003279 fastq.gz 8.7 GB Report
60 Files (360.1 GB)