About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Nuclear Optimized 10x data

Optimized 10x library to increase the coverage of selected nuclear variants from 3’ 10x Genomics scRNAseq data. SNVs were selected based on exome data and criteria described in the Supplementary Information of the manuscript.See details of the experimental method in the methods section of the manuscript

Request Access

Research use only. Project specific restriction

We will share data for scientific research upon reasonably justified requests. Research with the goal of identifying characteristics of the patient not related to the leukemia (such as surname inference and ancestry research) are excluded. The use of the data for projects not related to cancer research is excluded, exceptions may apply in the context of research aiming to develop new bioinformatics methods. Data cannot be made available to 3rd parties and must be stored in an institutional compute system behind a firewall and without world read access; if stored on portable devices, data must be encrypted. Users must present a signed Data Access Agreement available upon request. Terms of the DAA are not negotiable.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007078 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008003422 fastq.gz 909.5 MB Report
EGAF00008003423 fastq.gz 1.8 GB Report
EGAF00008003424 fastq.gz 152.0 MB Report
EGAF00008003425 fastq.gz 319.7 MB Report
EGAF00008003426 fastq.gz 2.2 GB Report
EGAF00008003427 fastq.gz 5.0 GB Report
EGAF00008003428 fastq.gz 582.3 MB Report
EGAF00008003429 fastq.gz 1.4 GB Report
EGAF00008003430 fastq.gz 859.5 MB Report
EGAF00008003431 fastq.gz 1.9 GB Report
EGAF00008003432 fastq.gz 326.1 MB Report
EGAF00008003433 fastq.gz 851.5 MB Report
EGAF00008003434 fastq.gz 9.0 MB Report
EGAF00008003435 fastq.gz 23.2 MB Report
EGAF00008003436 fastq.gz 484.1 MB Report
EGAF00008003437 fastq.gz 1.2 GB Report
EGAF00008003438 fastq.gz 95.6 MB Report
EGAF00008003439 fastq.gz 266.5 MB Report
EGAF00008003440 fastq.gz 147.9 MB Report
EGAF00008003441 fastq.gz 377.9 MB Report
EGAF00008003442 fastq.gz 1.2 GB Report
EGAF00008003443 fastq.gz 2.5 GB Report
EGAF00008003444 fastq.gz 661.8 MB Report
EGAF00008003445 fastq.gz 1.5 GB Report
EGAF00008003446 fastq.gz 129.1 MB Report
EGAF00008003447 fastq.gz 296.9 MB Report
EGAF00008003448 fastq.gz 141.5 MB Report
EGAF00008003449 fastq.gz 383.9 MB Report
EGAF00008003450 fastq.gz 389.2 MB Report
EGAF00008003451 fastq.gz 883.3 MB Report
EGAF00008003452 fastq.gz 113.9 MB Report
EGAF00008003453 fastq.gz 242.6 MB Report
EGAF00008003454 fastq.gz 103.4 MB Report
EGAF00008003455 fastq.gz 221.4 MB Report
EGAF00008003456 fastq.gz 54.2 MB Report
EGAF00008003457 fastq.gz 133.4 MB Report
EGAF00008003458 fastq.gz 67.3 MB Report
EGAF00008003459 fastq.gz 153.0 MB Report
EGAF00008003460 fastq.gz 53.0 MB Report
EGAF00008003461 fastq.gz 142.9 MB Report
EGAF00008003462 fastq.gz 26.7 MB Report
EGAF00008003463 fastq.gz 74.8 MB Report
42 Files (28.5 GB)