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lymphoma plasma cfRNA

Dataset contains total RNA sequencing data from plasma of 65 different human donors: 30 diffuse large B-cell lymphoma (DLBCL) and 13 primary mediastinal large B-cell lymphoma (PMBCL) patients, and 22 cancer-free controls. Samples were sequenced on a NovaSeq 6000 and are provided in FASTQ format.

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pan-cancer plasma RNA sequencing data access policy

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom XXXXX grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: XXXXX and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. XXXXX: Your Institution details here 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines ( ) and the Toronto Statement ( This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) ( ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) ( ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify XXXXX within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify XXXXX prior to any significant changes to the protocol for the Project. 14. The User Institution will notify XXXXX as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. XXXXX may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than XXXXX. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007127 Other
ID File Type Size Located in
EGAF00008011157 fastq.gz 1.1 GB
EGAF00008011158 fastq.gz 1.2 GB
EGAF00008011159 fastq.gz 1.3 GB
EGAF00008011160 fastq.gz 1.5 GB
EGAF00008011161 fastq.gz 1.2 GB
EGAF00008011162 fastq.gz 1.4 GB
EGAF00008011163 fastq.gz 1.2 GB
EGAF00008011164 fastq.gz 1.3 GB
EGAF00008011165 fastq.gz 1.1 GB
EGAF00008011166 fastq.gz 1.2 GB
EGAF00008011167 fastq.gz 1.2 GB
EGAF00008011168 fastq.gz 1.3 GB
EGAF00008011169 fastq.gz 1.3 GB
EGAF00008011170 fastq.gz 1.4 GB
EGAF00008011171 fastq.gz 1.4 GB
EGAF00008011172 fastq.gz 1.5 GB
EGAF00008011173 fastq.gz 1.1 GB
EGAF00008011174 fastq.gz 1.2 GB
EGAF00008011175 fastq.gz 1.2 GB
EGAF00008011176 fastq.gz 1.3 GB
EGAF00008011177 fastq.gz 1.2 GB
EGAF00008011178 fastq.gz 1.3 GB
EGAF00008011179 fastq.gz 914.2 MB
EGAF00008011180 fastq.gz 1.0 GB
EGAF00008011181 fastq.gz 1.0 GB
EGAF00008011182 fastq.gz 1.1 GB
EGAF00008011183 fastq.gz 1.4 GB
EGAF00008011184 fastq.gz 1.5 GB
EGAF00008011185 fastq.gz 1.5 GB
EGAF00008011186 fastq.gz 1.6 GB
EGAF00008011187 fastq.gz 1.2 GB
EGAF00008011188 fastq.gz 1.3 GB
EGAF00008011189 fastq.gz 1.5 GB
EGAF00008011190 fastq.gz 1.6 GB
EGAF00008011191 fastq.gz 1.2 GB
EGAF00008011192 fastq.gz 1.3 GB
EGAF00008011193 fastq.gz 1.3 GB
EGAF00008011194 fastq.gz 1.5 GB
EGAF00008011195 fastq.gz 1.2 GB
EGAF00008011196 fastq.gz 1.3 GB
EGAF00008011197 fastq.gz 1.3 GB
EGAF00008011198 fastq.gz 1.4 GB
EGAF00008011199 fastq.gz 1.1 GB
EGAF00008011200 fastq.gz 1.2 GB
EGAF00008011201 fastq.gz 1.2 GB
EGAF00008011202 fastq.gz 1.3 GB
EGAF00008011203 fastq.gz 1.3 GB
EGAF00008011204 fastq.gz 1.4 GB
EGAF00008011205 fastq.gz 1.3 GB
EGAF00008011206 fastq.gz 1.4 GB
EGAF00008011207 fastq.gz 1.1 GB
EGAF00008011208 fastq.gz 1.2 GB
EGAF00008011209 fastq.gz 1.2 GB
EGAF00008011210 fastq.gz 1.3 GB
EGAF00008011211 fastq.gz 1.4 GB
EGAF00008011212 fastq.gz 1.5 GB
EGAF00008011213 fastq.gz 1.2 GB
EGAF00008011214 fastq.gz 1.4 GB
EGAF00008011215 fastq.gz 1.2 GB
EGAF00008011216 fastq.gz 1.3 GB
EGAF00008011217 fastq.gz 1.4 GB
EGAF00008011218 fastq.gz 1.5 GB
EGAF00008011219 fastq.gz 1.1 GB
EGAF00008011220 fastq.gz 1.2 GB
EGAF00008011221 fastq.gz 1.2 GB
EGAF00008011222 fastq.gz 1.3 GB
EGAF00008011223 fastq.gz 1.1 GB
EGAF00008011224 fastq.gz 1.2 GB
EGAF00008011225 fastq.gz 1.3 GB
EGAF00008011226 fastq.gz 1.4 GB
EGAF00008011227 fastq.gz 1.1 GB
EGAF00008011228 fastq.gz 1.3 GB
EGAF00008011229 fastq.gz 1.2 GB
EGAF00008011230 fastq.gz 1.3 GB
EGAF00008011231 fastq.gz 1.4 GB
EGAF00008011232 fastq.gz 1.5 GB
EGAF00008011233 fastq.gz 1.2 GB
EGAF00008011234 fastq.gz 1.3 GB
EGAF00008011235 fastq.gz 1.1 GB
EGAF00008011236 fastq.gz 1.2 GB
EGAF00008011237 fastq.gz 1.2 GB
EGAF00008011238 fastq.gz 1.3 GB
EGAF00008011239 fastq.gz 928.6 MB
EGAF00008011240 fastq.gz 994.6 MB
EGAF00008011241 fastq.gz 826.9 MB
EGAF00008011242 fastq.gz 904.2 MB
EGAF00008011243 fastq.gz 1.1 GB
EGAF00008011244 fastq.gz 1.2 GB
EGAF00008011245 fastq.gz 991.0 MB
EGAF00008011246 fastq.gz 1.1 GB
EGAF00008011247 fastq.gz 909.4 MB
EGAF00008011248 fastq.gz 995.9 MB
EGAF00008011249 fastq.gz 1.1 GB
EGAF00008011250 fastq.gz 1.2 GB
EGAF00008011251 fastq.gz 705.5 MB
EGAF00008011252 fastq.gz 783.7 MB
EGAF00008011253 fastq.gz 781.6 MB
EGAF00008011254 fastq.gz 872.9 MB
EGAF00008011255 fastq.gz 1.1 GB
EGAF00008011256 fastq.gz 1.2 GB
EGAF00008011257 fastq.gz 1.3 GB
EGAF00008011258 fastq.gz 1.4 GB
EGAF00008011259 fastq.gz 1.2 GB
EGAF00008011260 fastq.gz 1.3 GB
EGAF00008011261 fastq.gz 1.5 GB
EGAF00008011262 fastq.gz 1.7 GB
EGAF00008011263 fastq.gz 1.3 GB
EGAF00008011264 fastq.gz 1.4 GB
EGAF00008011265 fastq.gz 746.4 MB
EGAF00008011266 fastq.gz 827.9 MB
EGAF00008011267 fastq.gz 959.0 MB
EGAF00008011268 fastq.gz 1.1 GB
EGAF00008011269 fastq.gz 914.9 MB
EGAF00008011270 fastq.gz 988.3 MB
EGAF00008011271 fastq.gz 882.0 MB
EGAF00008011272 fastq.gz 965.0 MB
EGAF00008011273 fastq.gz 1.0 GB
EGAF00008011274 fastq.gz 1.1 GB
EGAF00008011275 fastq.gz 1.1 GB
EGAF00008011276 fastq.gz 1.2 GB
EGAF00008011277 fastq.gz 1.1 GB
EGAF00008011278 fastq.gz 1.3 GB
EGAF00008011279 fastq.gz 1.2 GB
EGAF00008011280 fastq.gz 1.3 GB
EGAF00008011281 fastq.gz 1.0 GB
EGAF00008011282 fastq.gz 1.1 GB
EGAF00008011283 fastq.gz 1.0 GB
EGAF00008011284 fastq.gz 1.1 GB
EGAF00008011285 fastq.gz 917.9 MB
EGAF00008011286 fastq.gz 988.4 MB
130 Files (156.7 GB)