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RNAseq of pancreatic cancer organoids.

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Data access policy

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom Kyoto University grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: Kyoto University and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. Kyoto University: Department of Pathology and Tumor Biology, Kyoto University. 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines ( ) and the Toronto Statement ( This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) ( ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) ( ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify Kyoto University within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify Kyoto University prior to any significant changes to the protocol for the Project. 14. The User Institution will notify Kyoto University as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Kyoto University may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than Kyoto University. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of Japan and shall be subject to the exclusive jurisdiction of the Japanese courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007212 Other
ID File Type Size Located in
EGAF00008054841 fastq.gz 2.0 GB
EGAF00008054842 fastq.gz 2.1 GB
EGAF00008054844 fastq.gz 2.0 GB
EGAF00008054845 fastq.gz 2.2 GB
EGAF00008054848 fastq.gz 1.3 GB
EGAF00008054849 fastq.gz 1.4 GB
EGAF00008054850 fastq.gz 1.6 GB
EGAF00008054851 fastq.gz 1.7 GB
EGAF00008054854 fastq.gz 1.5 GB
EGAF00008054855 fastq.gz 1.5 GB
EGAF00008054857 fastq.gz 1.5 GB
EGAF00008054858 fastq.gz 1.6 GB
EGAF00008054862 fastq.gz 1.7 GB
EGAF00008054863 fastq.gz 1.9 GB
EGAF00008054864 fastq.gz 1.9 GB
EGAF00008054865 fastq.gz 2.1 GB
EGAF00008054868 fastq.gz 1.7 GB
EGAF00008054869 fastq.gz 1.8 GB
EGAF00008054871 fastq.gz 1.2 GB
EGAF00008054872 fastq.gz 1.3 GB
EGAF00008054875 fastq.gz 3.4 GB
EGAF00008054876 fastq.gz 3.7 GB
EGAF00008054877 fastq.gz 1.4 GB
EGAF00008054878 fastq.gz 1.6 GB
EGAF00008054880 fastq.gz 1.6 GB
EGAF00008054881 fastq.gz 1.7 GB
EGAF00008054883 fastq.gz 604.2 MB
EGAF00008054884 fastq.gz 654.9 MB
EGAF00008054887 fastq.gz 1.4 GB
EGAF00008054888 fastq.gz 1.5 GB
EGAF00008054891 fastq.gz 2.9 GB
EGAF00008054892 fastq.gz 3.4 GB
EGAF00008054896 fastq.gz 210.0 MB
EGAF00008054897 fastq.gz 221.8 MB
EGAF00008054899 fastq.gz 1.1 GB
EGAF00008054900 fastq.gz 1.2 GB
EGAF00008054903 fastq.gz 910.4 MB
EGAF00008054904 fastq.gz 1.0 GB
EGAF00008054905 fastq.gz 1.7 GB
EGAF00008054906 fastq.gz 1.9 GB
EGAF00008054908 fastq.gz 1.5 GB
EGAF00008054909 fastq.gz 1.7 GB
EGAF00008054911 fastq.gz 3.4 GB
EGAF00008054912 fastq.gz 3.6 GB
EGAF00008054914 fastq.gz 1.8 GB
EGAF00008054915 fastq.gz 2.0 GB
EGAF00008054916 fastq.gz 851.8 MB
EGAF00008054917 fastq.gz 926.8 MB
EGAF00008054920 fastq.gz 2.4 GB
EGAF00008054921 fastq.gz 2.6 GB
EGAF00008054923 fastq.gz 1.5 GB
EGAF00008054924 fastq.gz 1.6 GB
EGAF00008054927 fastq.gz 1.5 GB
EGAF00008054928 fastq.gz 1.7 GB
EGAF00008054930 fastq.gz 1.5 GB
EGAF00008054931 fastq.gz 1.6 GB
EGAF00008054936 fastq.gz 1.8 GB
EGAF00008054937 fastq.gz 2.0 GB
EGAF00008054939 fastq.gz 1.5 GB
EGAF00008054940 fastq.gz 1.6 GB
EGAF00008054944 fastq.gz 2.5 GB
EGAF00008054945 fastq.gz 2.7 GB
EGAF00008054949 fastq.gz 2.9 GB
EGAF00008054950 fastq.gz 3.4 GB
EGAF00008054954 fastq.gz 1.6 GB
EGAF00008054955 fastq.gz 1.8 GB
EGAF00008054956 fastq.gz 1.8 GB
EGAF00008054957 fastq.gz 2.0 GB
EGAF00008054960 fastq.gz 1.5 GB
EGAF00008054961 fastq.gz 1.7 GB
EGAF00008054962 fastq.gz 1.3 GB
EGAF00008054963 fastq.gz 1.4 GB
EGAF00008054966 fastq.gz 1.5 GB
EGAF00008054967 fastq.gz 1.7 GB
EGAF00008054968 fastq.gz 3.6 GB
EGAF00008054969 fastq.gz 3.9 GB
EGAF00008054972 fastq.gz 1.7 GB
EGAF00008054973 fastq.gz 1.9 GB
EGAF00008054974 fastq.gz 1.5 GB
EGAF00008054975 fastq.gz 1.6 GB
EGAF00008054978 fastq.gz 1.4 GB
EGAF00008054979 fastq.gz 1.6 GB
EGAF00008054980 fastq.gz 1.3 GB
EGAF00008054981 fastq.gz 1.4 GB
EGAF00008054984 fastq.gz 1.7 GB
EGAF00008054985 fastq.gz 1.9 GB
EGAF00008054986 fastq.gz 1.7 GB
EGAF00008054987 fastq.gz 1.9 GB
EGAF00008054991 fastq.gz 1.3 GB
EGAF00008054992 fastq.gz 1.3 GB
EGAF00008054993 fastq.gz 2.3 GB
EGAF00008054994 fastq.gz 2.7 GB
EGAF00008054997 fastq.gz 1.3 GB
EGAF00008054998 fastq.gz 1.4 GB
EGAF00008054999 fastq.gz 1.6 GB
EGAF00008055000 fastq.gz 1.7 GB
EGAF00008055004 fastq.gz 1.9 GB
EGAF00008055005 fastq.gz 2.2 GB
EGAF00008055006 fastq.gz 1.8 GB
EGAF00008055007 fastq.gz 1.9 GB
EGAF00008055009 fastq.gz 1.4 GB
EGAF00008055010 fastq.gz 1.6 GB
EGAF00008055011 fastq.gz 1.6 GB
EGAF00008055012 fastq.gz 1.7 GB
EGAF00008055015 fastq.gz 2.0 GB
EGAF00008055016 fastq.gz 2.2 GB
EGAF00008055017 fastq.gz 1.6 GB
EGAF00008055018 fastq.gz 1.9 GB
EGAF00008055020 fastq.gz 3.7 GB
EGAF00008055021 fastq.gz 4.4 GB
EGAF00008055023 fastq.gz 2.2 GB
EGAF00008055024 fastq.gz 2.5 GB
EGAF00008055028 fastq.gz 2.1 GB
EGAF00008055029 fastq.gz 2.2 GB
EGAF00008055030 fastq.gz 2.1 GB
EGAF00008055031 fastq.gz 2.5 GB
EGAF00008055033 fastq.gz 2.8 GB
EGAF00008055034 fastq.gz 3.3 GB
EGAF00008055036 fastq.gz 1.8 GB
EGAF00008055037 fastq.gz 2.0 GB
EGAF00008055043 fastq.gz 2.0 GB
EGAF00008055044 fastq.gz 2.2 GB
EGAF00008055045 fastq.gz 3.2 GB
EGAF00008055046 fastq.gz 3.8 GB
EGAF00008055048 fastq.gz 3.6 GB
EGAF00008055049 fastq.gz 3.8 GB
EGAF00008055051 fastq.gz 1.9 GB
EGAF00008055052 fastq.gz 2.1 GB
EGAF00008055054 fastq.gz 2.0 GB
EGAF00008055055 fastq.gz 2.0 GB
EGAF00008055056 fastq.gz 3.5 GB
EGAF00008055057 fastq.gz 3.7 GB
EGAF00008055063 fastq.gz 1.8 GB
EGAF00008055064 fastq.gz 2.0 GB
EGAF00008055065 fastq.gz 3.3 GB
EGAF00008055066 fastq.gz 3.5 GB
EGAF00008055069 fastq.gz 2.1 GB
EGAF00008055070 fastq.gz 2.3 GB
EGAF00008055071 fastq.gz 3.7 GB
EGAF00008055072 fastq.gz 3.9 GB
EGAF00008055075 fastq.gz 1.9 GB
EGAF00008055076 fastq.gz 2.1 GB
EGAF00008055078 fastq.gz 3.4 GB
EGAF00008055079 fastq.gz 3.6 GB
EGAF00008055082 fastq.gz 1.9 GB
EGAF00008055083 fastq.gz 2.1 GB
EGAF00008055084 fastq.gz 2.8 GB
EGAF00008055085 fastq.gz 3.1 GB
148 Files (301.7 GB)