About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Targeted NGS panel

The mutational status of 121 genes recurrently altered in B-cell lymphoma was examined in 55 of 56 diagnostic and 10 of 12 relapse samples using a custom targeted NGS panel. Libraries were generated from 150 ng of DNA using molecular-barcoded library adapters (ThruPLEX Tag- seq kit; Takara) coupled with a custom hybridization capture-based method (SureSelectXT Target Enrichment System Capture strategy, Agilent Technologies). The quality of the libraries was determined using the Bioanalyzer high sensitivity DNA kit (Agilent) and quantified by PCR using the KAPA library quantification kit (KAPA Biosystems). Finally, the libraries were pooled and sequenced in the MiSeq instrument (Illumina).

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007105 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008061646 fastq.gz 538.5 MB Report
EGAF00008061647 fastq.gz 616.7 MB Report
EGAF00008061648 fastq.gz 644.6 MB Report
EGAF00008061649 fastq.gz 659.1 MB Report
EGAF00008061650 fastq.gz 757.1 MB Report
EGAF00008061651 fastq.gz 775.9 MB Report
EGAF00008061652 fastq.gz 554.4 MB Report
EGAF00008061653 fastq.gz 568.1 MB Report
EGAF00008061654 fastq.gz 469.0 MB Report
EGAF00008061655 fastq.gz 481.8 MB Report
EGAF00008061656 fastq.gz 616.1 MB Report
EGAF00008061657 fastq.gz 639.6 MB Report
EGAF00008061658 fastq.gz 752.1 MB Report
EGAF00008061659 fastq.gz 799.9 MB Report
EGAF00008061660 fastq.gz 746.0 MB Report
EGAF00008061661 fastq.gz 782.1 MB Report
EGAF00008061662 fastq.gz 581.3 MB Report
EGAF00008061663 fastq.gz 605.3 MB Report
EGAF00008061664 fastq.gz 861.4 MB Report
EGAF00008061665 fastq.gz 892.4 MB Report
EGAF00008061666 fastq.gz 979.3 MB Report
EGAF00008061667 fastq.gz 1.0 GB Report
EGAF00008061668 fastq.gz 1.3 GB Report
EGAF00008061669 fastq.gz 1.4 GB Report
EGAF00008061670 fastq.gz 903.7 MB Report
EGAF00008061671 fastq.gz 933.5 MB Report
EGAF00008061672 fastq.gz 444.3 MB Report
EGAF00008061673 fastq.gz 463.0 MB Report
EGAF00008061674 fastq.gz 787.2 MB Report
EGAF00008061675 fastq.gz 817.2 MB Report
EGAF00008061676 fastq.gz 892.2 MB Report
EGAF00008061677 fastq.gz 921.1 MB Report
EGAF00008061678 fastq.gz 402.3 MB Report
EGAF00008061679 fastq.gz 420.4 MB Report
EGAF00008061680 fastq.gz 695.9 MB Report
EGAF00008061681 fastq.gz 728.8 MB Report
EGAF00008061682 fastq.gz 989.6 MB Report
EGAF00008061683 fastq.gz 1.0 GB Report
EGAF00008061684 fastq.gz 842.0 MB Report
EGAF00008061685 fastq.gz 875.2 MB Report
EGAF00008061686 fastq.gz 635.1 MB Report
EGAF00008061687 fastq.gz 667.6 MB Report
EGAF00008061688 fastq.gz 516.5 MB Report
EGAF00008061689 fastq.gz 528.6 MB Report
EGAF00008061690 fastq.gz 672.9 MB Report
EGAF00008061691 fastq.gz 706.3 MB Report
EGAF00008061692 fastq.gz 560.5 MB Report
EGAF00008061693 fastq.gz 572.1 MB Report
EGAF00008061694 fastq.gz 985.6 MB Report
EGAF00008061695 fastq.gz 1.0 GB Report
EGAF00008061696 fastq.gz 955.3 MB Report
EGAF00008061697 fastq.gz 986.4 MB Report
EGAF00008061698 fastq.gz 959.6 MB Report
EGAF00008061699 fastq.gz 994.1 MB Report
EGAF00008061700 fastq.gz 952.0 MB Report
EGAF00008061701 fastq.gz 983.6 MB Report
EGAF00008061702 fastq.gz 839.6 MB Report
EGAF00008061703 fastq.gz 877.1 MB Report
EGAF00008061704 fastq.gz 685.4 MB Report
EGAF00008061705 fastq.gz 700.7 MB Report
EGAF00008061706 fastq.gz 843.1 MB Report
EGAF00008061707 fastq.gz 877.4 MB Report
EGAF00008061708 fastq.gz 538.9 MB Report
EGAF00008061709 fastq.gz 558.2 MB Report
EGAF00008061710 fastq.gz 996.3 MB Report
EGAF00008061711 fastq.gz 1.0 GB Report
EGAF00008061712 fastq.gz 786.4 MB Report
EGAF00008061713 fastq.gz 801.4 MB Report
EGAF00008061714 fastq.gz 1.1 GB Report
EGAF00008061715 fastq.gz 1.1 GB Report
EGAF00008061716 fastq.gz 1.0 GB Report
EGAF00008061717 fastq.gz 1.0 GB Report
EGAF00008061718 fastq.gz 1.2 GB Report
EGAF00008061719 fastq.gz 1.3 GB Report
EGAF00008061720 fastq.gz 547.1 MB Report
EGAF00008061721 fastq.gz 560.0 MB Report
EGAF00008061722 fastq.gz 664.7 MB Report
EGAF00008061723 fastq.gz 680.3 MB Report
EGAF00008061724 fastq.gz 909.7 MB Report
EGAF00008061725 fastq.gz 944.0 MB Report
EGAF00008061726 fastq.gz 593.4 MB Report
EGAF00008061727 fastq.gz 632.6 MB Report
EGAF00008061728 fastq.gz 1.3 GB Report
EGAF00008061729 fastq.gz 1.3 GB Report
EGAF00008061730 fastq.gz 752.7 MB Report
EGAF00008061731 fastq.gz 781.1 MB Report
EGAF00008061732 fastq.gz 812.7 MB Report
EGAF00008061733 fastq.gz 850.9 MB Report
EGAF00008061734 fastq.gz 695.8 MB Report
EGAF00008061735 fastq.gz 731.8 MB Report
EGAF00008061736 fastq.gz 671.8 MB Report
EGAF00008061737 fastq.gz 693.1 MB Report
EGAF00008061738 fastq.gz 762.7 MB Report
EGAF00008061739 fastq.gz 792.6 MB Report
EGAF00008061740 fastq.gz 717.6 MB Report
EGAF00008061741 fastq.gz 744.5 MB Report
EGAF00008061742 fastq.gz 750.7 MB Report
EGAF00008061743 fastq.gz 788.4 MB Report
EGAF00008061744 fastq.gz 871.7 MB Report
EGAF00008061745 fastq.gz 908.9 MB Report
EGAF00008061746 fastq.gz 513.6 MB Report
EGAF00008061747 fastq.gz 534.4 MB Report
EGAF00008061748 fastq.gz 825.3 MB Report
EGAF00008061749 fastq.gz 858.4 MB Report
EGAF00008061750 fastq.gz 948.1 MB Report
EGAF00008061751 fastq.gz 986.8 MB Report
EGAF00008061752 fastq.gz 421.4 MB Report
EGAF00008061753 fastq.gz 438.0 MB Report
EGAF00008061754 fastq.gz 1.0 GB Report
EGAF00008061755 fastq.gz 1.1 GB Report
EGAF00008061756 fastq.gz 787.4 MB Report
EGAF00008061757 fastq.gz 810.2 MB Report
EGAF00008061758 fastq.gz 597.9 MB Report
EGAF00008061759 fastq.gz 609.7 MB Report
EGAF00008061760 fastq.gz 993.2 MB Report
EGAF00008061761 fastq.gz 1.0 GB Report
EGAF00008061762 fastq.gz 847.4 MB Report
EGAF00008061763 fastq.gz 877.2 MB Report
EGAF00008061764 fastq.gz 633.3 MB Report
EGAF00008061765 fastq.gz 641.9 MB Report
EGAF00008061766 fastq.gz 423.2 MB Report
EGAF00008061767 fastq.gz 435.9 MB Report
EGAF00008061768 fastq.gz 643.8 MB Report
EGAF00008061769 fastq.gz 653.6 MB Report
EGAF00008061770 fastq.gz 883.8 MB Report
EGAF00008061771 fastq.gz 901.6 MB Report
EGAF00008061772 fastq.gz 344.0 MB Report
EGAF00008061773 fastq.gz 349.5 MB Report
EGAF00008061774 fastq.gz 938.2 MB Report
EGAF00008061775 fastq.gz 977.3 MB Report
130 Files (101.6 GB)