4C-seq in endometrial healthy and tumor tissues

4C-seq performed on 10 slices (30um thick) of fresh frozen endometrial tissues. These tissue include 2 healthy tissues and 4 tumor tisseus (post-menopausal patients) in replicate. The library has been performed using DpnII (primary) and NlaIII (secondary) restriction enzymes. Raw single-end fastq.gz files are provided.

11 samples
DAC: EGAC00001003257
Technology: Illumina MiSeq

Access Policy1 Study History Files

Metadata

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001007240	Enhancer plasticity in endometrial tumorigenesis demarcates non-coding driver mutations and alterations in 3D genome organization to boost oncogene expression	Cancer Genomics

Six new samples have been added to the dataset. RNA has been extracted by Rneasy mini kit from around 30mg of flash frozen tissue derived from 3 healthy and 3 tumor endometrial tissues of post-menopausal patients. Raw paired-end fastq.gz files are provided. 25/05/2023
Dataset Released 25/05/2023

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00008066673	fastq.gz	49.4 MB
EGAF00008066674	fastq.gz	42.0 MB
EGAF00008066675	fastq.gz	34.8 MB
EGAF00008066676	fastq.gz	36.2 MB
EGAF00008066677	fastq.gz	43.5 MB
EGAF00008066678	fastq.gz	75.6 MB
EGAF00008066679	fastq.gz	103.0 MB
EGAF00008066680	fastq.gz	69.6 MB
EGAF00008066681	fastq.gz	35.2 MB
EGAF00008066682	fastq.gz	50.4 MB
EGAF00008066683	fastq.gz	35.4 MB
11 Files (575.2 MB)