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H3K27ac ChIP-seq of human acute leukemias and healthy donors

H3K27ac ChIP-seq of 79 primary samples derived from human acute leukemias, namely AML, T-ALL and mixed myeloid/lymphoid leukemias with CpG Island Methylator Phenotype (CIMP). In addition, 4 samples derived from CD34+ cord blood cells of healthy donors were included.

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Data access policy of the EMC-HEMA-AML consortium for adult acute myeloid leukemia data

THE EMC-HEMA-AML CONSORTIUM DATA ACCESS AGREEMENT This agreement governs the terms on which access will be granted to the genotype data generated by the EMC-HEMA-AML (part of the ERASMUSMC-HEMA consortium) consortium. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly. Definitions: Consortium means the EMC-HEMA-AML Consortium comprised out of the following members: Dr. Bas Wouters, Dr. Ruud Delwel, Roger Mulet-Lázaro, Dr. Mathijs A. Sanders, Dr. Peter J.M. Valk, Data means all and any human genetic data obtained from the Consortium. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organization at which the User is employed, affiliated or enrolled. Acute Myeloid Leukemia is hereafter referred to within the agreement as "AML". Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data from the adult ALL cohort or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevant access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. The relevant access committess will see to it that the Data is not used in publications outside the project described in the original application. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to abide by the terms outlined in the Consortium 'Publications Policy' as set out in Schedule 1. 9. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Consortium and the relevant primary collectors and their funders. Suitable wording is provided in the Publications Policy given in Schedule 1. 10. You accept that the Consortium, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 11. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 12. You recognize that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 13. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 14. You accept that it may be necessary for the Consortium or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Consortium or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 15. You agree that you will submit a report to the Consortium Data Access Committee, if requested, on completion of the agreed purpose. The Consortium Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 16. You accept that the Data is protected by and subject to international laws, and that You are responsible for ensuring compliance with any such applicable law. The Consortium Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA. 17. You agree to delete the data from your computers after a period of 2 years, unless an extension request is submitted to the DAC. 18. This agreement shall be construed, interpreted and governed by the laws of the Netherlands and shall be subject to the non-exclusive jurisdiction of the Dutch courts. SCHEDULE 1 Publications Policy The primary purpose of the EMC-HEMA-AML Consortium is to accelerate efforts to identify genome sequence variants influencing major causes of human morbidity and mortality, through implementation and analysis of large-scale genome-wide association studies. Additional objectives include the development and validation of informatics and analytical solutions appropriate to the scale and nature of the project, as well as use of the data generated to answer important methodological and biological questions relevant to association studies in general, and in the Netherlands in particular. The Consortium anticipates that data generated from the project will be used by others, such as required for developing new analytical methods, in understanding patterns of polymorphism and in guiding selection of markers to map genes involved in specific diseases. Authors who use data from the project must acknowledge the EMC-HEMA-AML using the following wording "This study makes use of data generated by the EMC-HEMA-AML Consortium. Cite the relevant primary EMC-HEMA-AML publication”. Users should note that the Consortium bears no responsibility for the further analysis or interpretation of these data, over and above that published by the Consortium.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007094 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008104604 bam 2.8 GB
EGAF00008104605 bam 869.2 MB
EGAF00008104606 bam 862.4 MB
EGAF00008104607 bam 1.3 GB
EGAF00008104608 bam 2.3 GB
EGAF00008104609 bam 857.6 MB
EGAF00008104610 bam 1.1 GB
EGAF00008104611 bam 1.2 GB
EGAF00008104612 bam 1.1 GB
EGAF00008104613 bam 1.2 GB
EGAF00008104614 bam 948.7 MB
EGAF00008104615 bam 927.2 MB
EGAF00008104616 bam 1.1 GB
EGAF00008104617 bam 1.1 GB
EGAF00008104618 bam 1.3 GB
EGAF00008104619 bam 1.0 GB
EGAF00008104620 bam 1.7 GB
EGAF00008104621 bam 1.1 GB
EGAF00008104622 bam 1.1 GB
EGAF00008104623 bam 1.1 GB
EGAF00008104624 bam 1.5 GB
EGAF00008104625 bam 1.1 GB
EGAF00008104626 bam 919.7 MB
EGAF00008104627 bam 3.4 GB
EGAF00008104628 bam 1.1 GB
EGAF00008104629 bam 1.1 GB
EGAF00008104630 bam 1.2 GB
EGAF00008104631 bam 961.6 MB
EGAF00008104632 bam 1.1 GB
EGAF00008104633 bam 1.3 GB
EGAF00008104634 bam 1.3 GB
EGAF00008104635 bam 1.3 GB
EGAF00008104636 bam 1.1 GB
EGAF00008104637 bam 832.3 MB
EGAF00008104638 bam 856.0 MB
EGAF00008104639 bam 1.3 GB
EGAF00008104640 bam 1.1 GB
EGAF00008104641 bam 1.1 GB
EGAF00008104642 bam 658.5 MB
EGAF00008104643 bam 1.1 GB
EGAF00008104644 bam 728.0 MB
EGAF00008104645 bam 1.3 GB
EGAF00008104646 bam 634.4 MB
EGAF00008104647 bam 1.0 GB
EGAF00008104648 bam 644.5 MB
EGAF00008104649 bam 2.7 GB
EGAF00008104650 bam 333.7 MB
EGAF00008104651 bam 887.0 MB
EGAF00008104652 bam 639.4 MB
EGAF00008104653 bam 1.9 GB
EGAF00008104654 bam 816.1 MB
EGAF00008104655 bam 787.4 MB
EGAF00008104656 bam 2.1 GB
EGAF00008104657 bam 515.8 MB
EGAF00008104658 bam 1.9 GB
EGAF00008104659 bam 841.3 MB
EGAF00008104660 bam 1.0 GB
EGAF00008104661 bam 631.0 MB
EGAF00008104662 bam 3.1 GB
EGAF00008104663 bam 1.0 GB
EGAF00008104664 bam 807.4 MB
EGAF00008104665 bam 893.9 MB
EGAF00008104666 bam 1.7 GB
EGAF00008104667 bam 1.1 GB
EGAF00008104668 bam 2.0 GB
EGAF00008104669 bam 912.1 MB
EGAF00008104670 bam 717.7 MB
EGAF00008104671 bam 839.9 MB
EGAF00008104672 bam 2.7 GB
EGAF00008104673 bam 1.0 GB
EGAF00008104674 bam 1.8 GB
EGAF00008104675 bam 1.4 GB
EGAF00008104676 bam 1.3 GB
EGAF00008104677 bam 956.2 MB
EGAF00008104678 bam 1.3 GB
EGAF00008104679 bam 1.1 GB
EGAF00008104680 bam 2.5 GB
EGAF00008104681 bam 1.0 GB
EGAF00008104682 bam 2.8 GB
EGAF00008104683 bam 943.0 MB
EGAF00008104684 bam 744.1 MB
EGAF00008104685 bam 789.6 MB
EGAF00008104686 bam 803.3 MB
EGAF00008104687 bam 2.3 GB
EGAF00008104688 bam 2.3 GB
EGAF00008104689 bam 2.1 GB
EGAF00008104690 bam 1.1 GB
EGAF00008104691 bam 1.2 GB
EGAF00008104692 bam 1.5 GB
EGAF00008104693 bam 826.7 MB
EGAF00008104694 bam 3.6 GB
EGAF00008104695 bam 706.7 MB
EGAF00008104696 bam 631.5 MB
EGAF00008104697 bam 1.3 GB
EGAF00008104698 bam 570.6 MB
EGAF00008104699 bam 1.0 GB
EGAF00008104700 bam 1.6 GB
EGAF00008104701 bam 917.4 MB
EGAF00008104702 bam 738.1 MB
EGAF00008104703 bam 939.9 MB
EGAF00008104704 bam 514.0 MB
EGAF00008104705 bam 763.9 MB
EGAF00008104706 bam 5.6 GB
EGAF00008104707 bam 950.2 MB
EGAF00008104708 bam 2.4 GB
EGAF00008104709 bam 609.0 MB
EGAF00008104710 bam 2.2 GB
EGAF00008104711 bam 774.4 MB
EGAF00008104712 bam 3.5 GB
EGAF00008104713 bam 911.3 MB
EGAF00008104714 bam 1.4 GB
EGAF00008104715 bam 1.3 GB
EGAF00008104716 bam 659.0 MB
EGAF00008104717 bam 1.2 GB
EGAF00008104718 bam 1.0 GB
EGAF00008104719 bam 630.5 MB
EGAF00008104720 bam 1.3 GB
EGAF00008104721 bam 692.4 MB
EGAF00008104722 bam 1.5 GB
EGAF00008104723 bam 1.4 GB
EGAF00008104724 bam 3.1 GB
EGAF00008104725 bam 1.5 GB
EGAF00008104726 bam 1.7 GB
EGAF00008104727 bam 838.0 MB
EGAF00008104728 bam 793.5 MB
EGAF00008104729 bam 700.9 MB
EGAF00008104730 bam 605.2 MB
EGAF00008104731 bam 545.4 MB
EGAF00008104732 bam 616.0 MB
EGAF00008104733 bam 628.5 MB
EGAF00008104734 bam 462.7 MB
EGAF00008104735 bam 752.0 MB
EGAF00008104736 bam 635.0 MB
EGAF00008104737 bam 519.0 MB
EGAF00008104738 bam 668.4 MB
EGAF00008104739 bam 503.4 MB
EGAF00008104740 bam 563.0 MB
EGAF00008104741 bam 586.6 MB
EGAF00008104742 bam 646.4 MB
EGAF00008104743 bam 509.6 MB
EGAF00008104744 bam 801.7 MB
EGAF00008104745 bam 460.5 MB
EGAF00008104746 bam 1.4 GB
EGAF00008104747 bam 1.4 GB
EGAF00008104748 bam 1.6 GB
EGAF00008104749 bam 1.5 GB
EGAF00008104750 bam 1.9 GB
EGAF00008104751 bam 1.7 GB
EGAF00008104752 bam 1.5 GB
EGAF00008104753 bam 1.6 GB
EGAF00008104754 bam 1.3 GB
EGAF00008104755 bam 1.0 GB
EGAF00008104756 bam 1.5 GB
EGAF00008104757 bam 1.2 GB
EGAF00008104758 bam 1.3 GB
EGAF00008104759 bam 1.2 GB
EGAF00008104760 bam 759.1 MB
EGAF00008104761 bam 1.3 GB
EGAF00008104762 bam 2.1 GB
EGAF00008104763 bam 1.0 GB
EGAF00008104764 bam 680.7 MB
EGAF00008104765 bam 1.0 GB
EGAF00008104786 bai 6.8 MB
EGAF00008104787 bai 6.7 MB
EGAF00008104788 bai 6.8 MB
EGAF00008104789 bai 6.4 MB
EGAF00008104790 bai 6.5 MB
EGAF00008104791 bai 6.0 MB
EGAF00008104792 bai 6.2 MB
EGAF00008104793 bai 6.6 MB
EGAF00008104794 bai 2.4 MB
EGAF00008104795 bai 6.5 MB
EGAF00008104796 bai 2.4 MB
EGAF00008104797 bai 6.7 MB
EGAF00008104798 bai 6.2 MB
EGAF00008104799 bai 2.3 MB
EGAF00008104800 bai 6.3 MB
EGAF00008104801 bai 2.4 MB
EGAF00008104802 bai 2.8 MB
EGAF00008104803 bai 6.4 MB
EGAF00008104804 bai 2.3 MB
EGAF00008104805 bai 6.5 MB
EGAF00008104806 bai 6.6 MB
EGAF00008104807 bai 6.0 MB
EGAF00008104808 bai 6.4 MB
EGAF00008104809 bai 6.9 MB
EGAF00008104810 bai 7.2 MB
EGAF00008104811 bai 6.5 MB
EGAF00008104812 bai 6.5 MB
EGAF00008104813 bai 6.4 MB
EGAF00008104814 bai 2.1 MB
EGAF00008104815 bai 6.7 MB
EGAF00008104816 bai 6.4 MB
EGAF00008104817 bai 6.0 MB
EGAF00008104818 bai 6.1 MB
EGAF00008104819 bai 6.4 MB
EGAF00008104820 bai 6.3 MB
EGAF00008104821 bai 6.8 MB
EGAF00008104822 bai 6.4 MB
EGAF00008104823 bai 6.2 MB
EGAF00008104824 bai 6.7 MB
EGAF00008104825 bai 2.6 MB
EGAF00008104826 bai 6.1 MB
EGAF00008104827 bai 3.7 MB
EGAF00008104828 bai 6.6 MB
EGAF00008104829 bai 6.6 MB
EGAF00008104830 bai 2.2 MB
EGAF00008104831 bai 6.0 MB
EGAF00008104832 bai 6.0 MB
EGAF00008104833 bai 6.2 MB
EGAF00008104834 bai 6.4 MB
EGAF00008104835 bai 2.3 MB
EGAF00008104836 bai 6.4 MB
EGAF00008104837 bai 2.6 MB
EGAF00008104838 bai 6.4 MB
EGAF00008104839 bai 2.3 MB
EGAF00008104840 bai 2.4 MB
EGAF00008104841 bai 2.6 MB
EGAF00008104842 bai 6.6 MB
EGAF00008104843 bai 6.3 MB
EGAF00008104844 bai 6.6 MB
EGAF00008104845 bai 6.5 MB
EGAF00008104846 bai 2.5 MB
EGAF00008104847 bai 3.4 MB
EGAF00008104848 bai 6.5 MB
EGAF00008104849 bai 6.6 MB
EGAF00008104850 bai 6.4 MB
EGAF00008104851 bai 6.0 MB
EGAF00008104852 bai 6.1 MB
EGAF00008104853 bai 2.7 MB
EGAF00008104854 bai 6.2 MB
EGAF00008104855 bai 6.1 MB
EGAF00008104856 bai 2.2 MB
EGAF00008104857 bai 6.5 MB
EGAF00008104858 bai 6.8 MB
EGAF00008104859 bai 6.5 MB
EGAF00008104860 bai 6.5 MB
EGAF00008104861 bai 6.3 MB
EGAF00008104862 bai 6.1 MB
EGAF00008104863 bai 6.7 MB
EGAF00008104864 bai 3.0 MB
EGAF00008104865 bai 6.4 MB
EGAF00008104866 bai 6.6 MB
EGAF00008104867 bai 6.8 MB
EGAF00008104868 bai 6.2 MB
EGAF00008104869 bai 2.8 MB
EGAF00008104870 bai 2.3 MB
EGAF00008104871 bai 6.1 MB
EGAF00008104872 bai 6.7 MB
EGAF00008104873 bai 2.5 MB
EGAF00008104874 bai 7.3 MB
EGAF00008104875 bai 6.6 MB
EGAF00008104876 bai 6.4 MB
EGAF00008104877 bai 2.3 MB
EGAF00008104878 bai 7.0 MB
EGAF00008104879 bai 6.0 MB
EGAF00008104880 bai 2.3 MB
EGAF00008104881 bai 6.0 MB
EGAF00008104882 bai 6.4 MB
EGAF00008104883 bai 6.2 MB
EGAF00008104884 bai 6.0 MB
EGAF00008104885 bai 2.4 MB
EGAF00008104886 bai 2.9 MB
EGAF00008104887 bai 2.4 MB
EGAF00008104888 bai 6.7 MB
EGAF00008104889 bai 6.4 MB
EGAF00008104890 bai 6.3 MB
EGAF00008104891 bai 6.4 MB
EGAF00008104892 bai 6.4 MB
EGAF00008104893 bai 6.6 MB
EGAF00008104894 bai 2.5 MB
EGAF00008104895 bai 2.3 MB
EGAF00008104896 bai 6.6 MB
EGAF00008104897 bai 6.9 MB
EGAF00008104898 bai 6.2 MB
EGAF00008104899 bai 6.4 MB
EGAF00008104900 bai 6.4 MB
EGAF00008104901 bai 6.1 MB
EGAF00008104902 bai 6.2 MB
EGAF00008104903 bai 6.4 MB
EGAF00008104904 bai 2.7 MB
EGAF00008104905 bai 2.1 MB
EGAF00008104906 bai 6.6 MB
EGAF00008104907 bai 2.8 MB
EGAF00008104908 bai 2.2 MB
EGAF00008104909 bai 3.0 MB
EGAF00008104910 bai 6.9 MB
EGAF00008104911 bai 6.4 MB
EGAF00008104912 bai 6.7 MB
EGAF00008104913 bai 6.4 MB
EGAF00008104914 bai 2.8 MB
EGAF00008104915 bai 6.6 MB
EGAF00008104916 bai 6.7 MB
EGAF00008104917 bai 6.8 MB
EGAF00008104918 bai 2.3 MB
EGAF00008104919 bai 6.6 MB
EGAF00008104920 bai 5.1 MB
EGAF00008104921 bai 2.4 MB
EGAF00008104922 bai 6.1 MB
EGAF00008104923 bai 6.7 MB
EGAF00008104924 bai 6.6 MB
EGAF00008104925 bai 6.6 MB
EGAF00008104926 bai 6.5 MB
EGAF00008104927 bai 6.3 MB
EGAF00008104928 bai 6.2 MB
EGAF00008104929 bai 6.7 MB
EGAF00008104930 bai 6.6 MB
EGAF00008104931 bai 2.3 MB
EGAF00008104932 bai 6.7 MB
EGAF00008104933 bai 6.3 MB
EGAF00008104934 bai 6.4 MB
EGAF00008104935 bai 6.6 MB
EGAF00008104936 bai 2.3 MB
EGAF00008104937 bai 6.4 MB
EGAF00008104938 bai 6.6 MB
EGAF00008104939 bai 6.5 MB
EGAF00008104940 bai 6.6 MB
EGAF00008104941 bai 6.5 MB
EGAF00008104942 bai 2.2 MB
EGAF00008104943 bai 2.5 MB
EGAF00008104944 bai 6.3 MB
EGAF00008104945 bai 6.6 MB
EGAF00008104946 bai 2.5 MB
EGAF00008104947 bai 6.2 MB
324 Files (201.5 GB)