About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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This dataset contains WES data 5 patients and WGS data of 1 patient with Lynch Syndrome from the INFORM registry.

This dataset contains paired whole exome sequence data of 5 patients (control/tumor pairs) and paired whole genome sequencing data of 1 patient (control/tumor pair) with Lynch Syndrome from the INFORM registry. Paired sequencing was done mostly on Illumina HiSeq 4000, few on HiSeq2500 and NovaSeq 6000. The library preparation was either with Agilent SureSelect Human_All_Exon V5 (hg19) or with Agilent SureSelectXT HS Human_All_Exon V7 (hg19). The WGS samples were prepared with Agilent SureSelect WGS.

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Inform Policy for Data Access for the submission of Lynch syndrome data

To request access to the data, send an email to inform-dac@kitz-heidelberg.de for instructions on how to proceed to obtain the data.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007146 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008034131 fastq.gz 4.8 GB Report
EGAF00008034132 fastq.gz 5.1 GB Report
EGAF00008034133 fastq.gz 6.2 GB Report
EGAF00008034134 fastq.gz 7.0 GB Report
EGAF00008034135 fastq.gz 1.5 GB Report
EGAF00008034136 fastq.gz 1.5 GB Report
EGAF00008034137 fastq.gz 1.5 GB Report
EGAF00008034138 fastq.gz 1.5 GB Report
EGAF00008034139 fastq.gz 1.9 GB Report
EGAF00008034140 fastq.gz 1.9 GB Report
EGAF00008034141 fastq.gz 1.9 GB Report
EGAF00008034142 fastq.gz 1.9 GB Report
EGAF00008034143 fastq.gz 4.5 GB Report
EGAF00008034144 fastq.gz 4.7 GB Report
EGAF00008034145 fastq.gz 4.5 GB Report
EGAF00008034146 fastq.gz 4.6 GB Report
EGAF00008034147 fastq.gz 5.1 GB Report
EGAF00008034148 fastq.gz 5.2 GB Report
EGAF00008034149 fastq.gz 6.3 GB Report
EGAF00008034150 fastq.gz 6.6 GB Report
EGAF00008034151 fastq.gz 8.1 GB Report
EGAF00008034152 fastq.gz 8.3 GB Report
EGAF00008034153 fastq.gz 4.5 GB Report
EGAF00008034154 fastq.gz 5.1 GB Report
EGAF00008034155 fastq.gz 5.1 GB Report
EGAF00008034156 fastq.gz 5.7 GB Report
EGAF00008034157 fastq.gz 3.8 GB Report
EGAF00008034158 fastq.gz 4.2 GB Report
EGAF00008034159 fastq.gz 3.2 GB Report
EGAF00008034160 fastq.gz 3.5 GB Report
30 Files (129.7 GB)