Single cell RNA-seq, TCR-seq and bulk TCR-seq on HNSCC patients treated with ICB

137 samples
DAC: EGAC00001003316
Technology: unspecified

Access Policy1 Study Files

Metadata

Request Access

DAC for requesting access to the single cell datasets (scRNAseq and scTCRseq) and bulk TCR on HNSCC patients treated with neoadj NIVO/IPI.

To request access to the single cell datasets on HNSCC patients treated with neoadj NIVO/IPI, please provide the following information in your Data Access Request: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and Dataset Accession Number(s) - Brief abstract of the Project in which the Data will be used (500 words max.) - All Individuals who will be allowed access to the requested datasets by the Recipient Institution. After receipt and review of your Data Access Request by the Data Access Committee, you will receive a Data Transfer Agreement to be completed, signed and returned to KT&C and the Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the Data Access Committee reserves the right to withhold granting access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001007368	scRNA-seq and scTCR-seq data IMCISION	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size	Quality Report
EGAF00008202428	fastq.gz	77.1 MB	Report
EGAF00008202429	fastq.gz	192.4 MB	Report
EGAF00008202430	fastq.gz	105.2 MB	Report
EGAF00008202431	fastq.gz	262.4 MB	Report
EGAF00008202432	fastq.gz	76.5 MB	Report
EGAF00008202433	fastq.gz	190.4 MB	Report
EGAF00008202434	fastq.gz	1.0 GB	Report
EGAF00008202435	fastq.gz	3.5 GB	Report
EGAF00008202436	fastq.gz	840.6 MB	Report
EGAF00008202437	fastq.gz	2.9 GB	Report
EGAF00008202438	fastq.gz	564.7 MB	Report
EGAF00008202439	fastq.gz	1.9 GB	Report
EGAF00008202440	fastq.gz	746.0 MB	Report
EGAF00008202441	fastq.gz	2.6 GB	Report
EGAF00008202442	fastq.gz	784.3 MB	Report
EGAF00008202443	fastq.gz	2.7 GB	Report
EGAF00008202444	fastq.gz	373.8 MB	Report
EGAF00008202445	fastq.gz	642.0 MB	Report
EGAF00008202446	fastq.gz	500.3 MB	Report
EGAF00008202447	fastq.gz	861.9 MB	Report
EGAF00008202448	fastq.gz	165.4 MB	Report
EGAF00008202449	fastq.gz	511.9 MB	Report
EGAF00008202450	fastq.gz	125.9 MB	Report
EGAF00008202451	fastq.gz	384.4 MB	Report
EGAF00008202452	fastq.gz	241.4 MB	Report
EGAF00008202453	fastq.gz	740.8 MB	Report
EGAF00008202454	fastq.gz	57.4 MB	Report
EGAF00008202455	fastq.gz	142.3 MB	Report
EGAF00008202456	fastq.gz	71.8 MB	Report
EGAF00008202457	fastq.gz	178.9 MB	Report
EGAF00008202458	fastq.gz	128.1 MB	Report
EGAF00008202459	fastq.gz	255.1 MB	Report
EGAF00008202460	fastq.gz	121.3 MB	Report
EGAF00008202461	fastq.gz	241.2 MB	Report
EGAF00008202462	fastq.gz	119.3 MB	Report
EGAF00008202463	fastq.gz	238.6 MB	Report
EGAF00008202464	fastq.gz	95.7 MB	Report
EGAF00008202465	fastq.gz	190.4 MB	Report
EGAF00008202466	fastq.gz	40.9 MB	Report
EGAF00008202467	fastq.gz	60.0 MB	Report
EGAF00008202468	fastq.gz	38.9 MB	Report
EGAF00008202469	fastq.gz	57.0 MB	Report
EGAF00008202470	fastq.gz	38.0 MB	Report
EGAF00008202471	fastq.gz	55.9 MB	Report
EGAF00008202472	fastq.gz	30.5 MB	Report
EGAF00008202473	fastq.gz	44.7 MB	Report
EGAF00008202474	fastq.gz	30.2 MB	Report
EGAF00008202475	fastq.gz	44.4 MB	Report
EGAF00008202476	fastq.gz	23.3 MB	Report
EGAF00008202477	fastq.gz	34.2 MB	Report
EGAF00008202478	fastq.gz	21.1 MB	Report
EGAF00008202479	fastq.gz	31.0 MB	Report
EGAF00008202480	fastq.gz	26.2 MB	Report
EGAF00008202481	fastq.gz	38.5 MB	Report
EGAF00008202482	fastq.gz	17.4 MB	Report
EGAF00008202483	fastq.gz	25.5 MB	Report
EGAF00008202484	fastq.gz	25.8 MB	Report
EGAF00008202485	fastq.gz	38.1 MB	Report
EGAF00008202486	fastq.gz	13.1 MB	Report
EGAF00008202487	fastq.gz	19.2 MB	Report
EGAF00008202488	fastq.gz	25.5 MB	Report
EGAF00008202489	fastq.gz	37.7 MB	Report
EGAF00008202490	fastq.gz	13.8 MB	Report
EGAF00008202491	fastq.gz	20.2 MB	Report
EGAF00008202492	fastq.gz	15.3 MB	Report
EGAF00008202493	fastq.gz	22.4 MB	Report
EGAF00008202494	fastq.gz	13.8 MB	Report
EGAF00008202495	fastq.gz	20.3 MB	Report
EGAF00008202496	fastq.gz	16.0 MB	Report
EGAF00008202497	fastq.gz	23.3 MB	Report
EGAF00008202498	fastq.gz	35.7 MB	Report
EGAF00008202499	fastq.gz	52.5 MB	Report
EGAF00008202500	fastq.gz	39.4 MB	Report
EGAF00008202501	fastq.gz	58.0 MB	Report
EGAF00008202502	fastq.gz	34.8 MB	Report
EGAF00008202503	fastq.gz	51.0 MB	Report
EGAF00008202504	fastq.gz	30.3 MB	Report
EGAF00008202505	fastq.gz	44.4 MB	Report
EGAF00008202506	fastq.gz	76.4 MB	Report
EGAF00008202507	fastq.gz	113.2 MB	Report
EGAF00008202508	fastq.gz	93.5 MB	Report
EGAF00008202509	fastq.gz	138.3 MB	Report
EGAF00008202510	fastq.gz	92.2 MB	Report
EGAF00008202511	fastq.gz	136.4 MB	Report
EGAF00008202512	fastq.gz	92.6 MB	Report
EGAF00008202513	fastq.gz	137.3 MB	Report
EGAF00008202514	fastq.gz	74.4 MB	Report
EGAF00008202515	fastq.gz	110.0 MB	Report
EGAF00008202516	fastq.gz	35.0 MB	Report
EGAF00008202517	fastq.gz	51.8 MB	Report
EGAF00008202518	fastq.gz	63.5 MB	Report
EGAF00008202519	fastq.gz	93.9 MB	Report
EGAF00008202520	fastq.gz	43.0 MB	Report
EGAF00008202521	fastq.gz	63.6 MB	Report
EGAF00008202522	fastq.gz	915.5 MB	Report
EGAF00008202523	fastq.gz	3.1 GB	Report
EGAF00008202524	fastq.gz	674.8 MB	Report
EGAF00008202525	fastq.gz	2.3 GB	Report
EGAF00008202526	fastq.gz	1.2 GB	Report
EGAF00008202527	fastq.gz	4.1 GB	Report
EGAF00008202528	fastq.gz	357.5 MB	Report
EGAF00008202529	fastq.gz	615.3 MB	Report
EGAF00008202530	fastq.gz	406.0 MB	Report
EGAF00008202531	fastq.gz	704.0 MB	Report
EGAF00008202532	fastq.gz	339.5 MB	Report
EGAF00008202533	fastq.gz	586.3 MB	Report
EGAF00008202534	fastq.gz	456.1 MB	Report
EGAF00008202535	fastq.gz	789.2 MB	Report
EGAF00008202536	fastq.gz	326.9 MB	Report
EGAF00008202537	fastq.gz	565.5 MB	Report
EGAF00008202538	fastq.gz	370.6 MB	Report
EGAF00008202539	fastq.gz	646.4 MB	Report
EGAF00008202540	fastq.gz	243.5 MB	Report
EGAF00008202541	fastq.gz	415.3 MB	Report
EGAF00008202542	fastq.gz	242.4 MB	Report
EGAF00008202543	fastq.gz	412.6 MB	Report
EGAF00008202544	fastq.gz	221.6 MB	Report
EGAF00008202545	fastq.gz	378.3 MB	Report
EGAF00008202546	fastq.gz	264.3 MB	Report
EGAF00008202547	fastq.gz	452.6 MB	Report
EGAF00008202548	fastq.gz	141.0 MB	Report
EGAF00008202549	fastq.gz	236.5 MB	Report
EGAF00008202550	fastq.gz	120.7 MB	Report
EGAF00008202551	fastq.gz	201.9 MB	Report
EGAF00008202552	fastq.gz	195.8 MB	Report
EGAF00008202553	fastq.gz	328.8 MB	Report
EGAF00008202554	fastq.gz	195.5 MB	Report
EGAF00008202555	fastq.gz	329.6 MB	Report
EGAF00008202556	fastq.gz	596.9 MB	Report
EGAF00008202557	fastq.gz	941.9 MB	Report
EGAF00008202558	fastq.gz	595.3 MB	Report
EGAF00008202559	fastq.gz	938.2 MB	Report
EGAF00008202560	fastq.gz	545.8 MB	Report
EGAF00008202561	fastq.gz	860.0 MB	Report
EGAF00008202562	fastq.gz	648.7 MB	Report
EGAF00008202563	fastq.gz	1.0 GB	Report
EGAF00008202564	fastq.gz	204.9 MB	Report
EGAF00008202565	fastq.gz	315.9 MB	Report
EGAF00008202566	fastq.gz	176.3 MB	Report
EGAF00008202567	fastq.gz	271.5 MB	Report
EGAF00008202568	fastq.gz	279.6 MB	Report
EGAF00008202569	fastq.gz	431.3 MB	Report
EGAF00008202570	fastq.gz	284.2 MB	Report
EGAF00008202571	fastq.gz	440.9 MB	Report
EGAF00008202572	fastq.gz	180.3 MB	Report
EGAF00008202573	fastq.gz	305.0 MB	Report
EGAF00008202574	fastq.gz	118.4 MB	Report
EGAF00008202575	fastq.gz	200.1 MB	Report
EGAF00008202576	fastq.gz	85.2 MB	Report
EGAF00008202577	fastq.gz	144.0 MB	Report
EGAF00008202578	fastq.gz	87.6 MB	Report
EGAF00008202579	fastq.gz	148.6 MB	Report
EGAF00008202580	fastq.gz	43.6 MB	Report
EGAF00008202581	fastq.gz	67.3 MB	Report
EGAF00008202582	fastq.gz	28.7 MB	Report
EGAF00008202583	fastq.gz	44.3 MB	Report
EGAF00008202584	fastq.gz	20.7 MB	Report
EGAF00008202585	fastq.gz	31.9 MB	Report
EGAF00008202586	fastq.gz	21.2 MB	Report
EGAF00008202587	fastq.gz	33.0 MB	Report
EGAF00008202588	fastq.gz	260.6 MB	Report
EGAF00008202589	fastq.gz	441.3 MB	Report
EGAF00008202590	fastq.gz	298.6 MB	Report
EGAF00008202591	fastq.gz	515.8 MB	Report
EGAF00008202592	fastq.gz	365.9 MB	Report
EGAF00008202593	fastq.gz	623.8 MB	Report
EGAF00008202594	fastq.gz	272.0 MB	Report
EGAF00008202595	fastq.gz	463.9 MB	Report
EGAF00008202596	fastq.gz	650.2 MB	Report
EGAF00008202597	fastq.gz	1.0 GB	Report
EGAF00008202598	fastq.gz	742.2 MB	Report
EGAF00008202599	fastq.gz	1.2 GB	Report
EGAF00008202600	fastq.gz	908.6 MB	Report
EGAF00008202601	fastq.gz	1.4 GB	Report
EGAF00008202602	fastq.gz	679.5 MB	Report
EGAF00008202603	fastq.gz	1.1 GB	Report
EGAF00008202604	fastq.gz	834.4 MB	Report
EGAF00008202605	fastq.gz	1.5 GB	Report
EGAF00008202606	fastq.gz	770.3 MB	Report
EGAF00008202607	fastq.gz	1.4 GB	Report
EGAF00008202608	fastq.gz	900.2 MB	Report
EGAF00008202609	fastq.gz	1.6 GB	Report
EGAF00008202610	fastq.gz	23.8 MB	Report
EGAF00008202611	fastq.gz	40.6 MB	Report
EGAF00008202612	fastq.gz	439.0 MB	Report
EGAF00008202613	fastq.gz	762.6 MB	Report
EGAF00008202614	fastq.gz	570.2 MB	Report
EGAF00008202615	fastq.gz	998.1 MB	Report
EGAF00008202616	fastq.gz	220.8 MB	Report
EGAF00008202617	fastq.gz	381.1 MB	Report
EGAF00008202618	fastq.gz	572.0 MB	Report
EGAF00008202619	fastq.gz	995.9 MB	Report
EGAF00008202620	fastq.gz	1.1 GB	Report
EGAF00008202621	fastq.gz	1.7 GB	Report
EGAF00008202622	fastq.gz	986.2 MB	Report
EGAF00008202623	fastq.gz	1.6 GB	Report
EGAF00008202624	fastq.gz	1.2 GB	Report
EGAF00008202625	fastq.gz	1.9 GB	Report
EGAF00008202626	fastq.gz	31.6 MB	Report
EGAF00008202627	fastq.gz	49.6 MB	Report
EGAF00008202628	fastq.gz	401.8 MB	Report
EGAF00008202629	fastq.gz	637.4 MB	Report
EGAF00008202630	fastq.gz	518.1 MB	Report
EGAF00008202631	fastq.gz	833.0 MB	Report
EGAF00008202632	fastq.gz	201.4 MB	Report
EGAF00008202633	fastq.gz	317.8 MB	Report
EGAF00008202634	fastq.gz	519.8 MB	Report
EGAF00008202635	fastq.gz	827.2 MB	Report
EGAF00008202636	fastq.gz	160.4 MB	Report
EGAF00008202637	fastq.gz	491.2 MB	Report
EGAF00008202638	fastq.gz	185.8 MB	Report
EGAF00008202639	fastq.gz	569.6 MB	Report
EGAF00008202640	fastq.gz	345.2 MB	Report
EGAF00008202641	fastq.gz	1.1 GB	Report
EGAF00008202642	fastq.gz	200.6 MB	Report
EGAF00008202643	fastq.gz	615.4 MB	Report
EGAF00008202644	fastq.gz	221.4 MB	Report
EGAF00008202645	fastq.gz	692.8 MB	Report
EGAF00008202646	fastq.gz	295.7 MB	Report
EGAF00008202647	fastq.gz	698.0 MB	Report
EGAF00008202648	fastq.gz	418.8 MB	Report
EGAF00008202649	fastq.gz	990.4 MB	Report
EGAF00008202650	fastq.gz	309.1 MB	Report
EGAF00008202651	fastq.gz	733.5 MB	Report
EGAF00008202652	fastq.gz	277.1 MB	Report
EGAF00008202653	fastq.gz	655.7 MB	Report
EGAF00008202654	fastq.gz	64.9 MB	Report
EGAF00008202655	fastq.gz	227.0 MB	Report
EGAF00008202656	fastq.gz	80.3 MB	Report
EGAF00008202657	fastq.gz	267.9 MB	Report
EGAF00008202658	fastq.gz	103.1 MB	Report
EGAF00008202659	fastq.gz	350.9 MB	Report
EGAF00008202660	fastq.gz	73.0 MB	Report
EGAF00008202661	fastq.gz	242.3 MB	Report
EGAF00008202662	fastq.gz	51.1 MB	Report
EGAF00008202663	fastq.gz	170.0 MB	Report
EGAF00008202664	fastq.gz	39.9 MB	Report
EGAF00008202665	fastq.gz	133.9 MB	Report
EGAF00008202666	fastq.gz	77.1 MB	Report
EGAF00008202667	fastq.gz	258.4 MB	Report
EGAF00008202668	fastq.gz	68.1 MB	Report
EGAF00008202669	fastq.gz	225.8 MB	Report
EGAF00008202670	fastq.gz	40.6 MB	Report
EGAF00008202671	fastq.gz	133.8 MB	Report
EGAF00008202672	fastq.gz	49.6 MB	Report
EGAF00008202673	fastq.gz	174.0 MB	Report
EGAF00008202674	fastq.gz	38.0 MB	Report
EGAF00008202675	fastq.gz	125.2 MB	Report
EGAF00008202676	fastq.gz	37.6 MB	Report
EGAF00008202677	fastq.gz	123.7 MB	Report
EGAF00008202678	fastq.gz	93.3 MB	Report
EGAF00008202679	fastq.gz	310.2 MB	Report
EGAF00008202680	fastq.gz	116.7 MB	Report
EGAF00008202681	fastq.gz	401.7 MB	Report
EGAF00008202682	fastq.gz	89.3 MB	Report
EGAF00008202683	fastq.gz	297.2 MB	Report
EGAF00008202684	fastq.gz	75.6 MB	Report
EGAF00008202685	fastq.gz	252.5 MB	Report
EGAF00008202686	fastq.gz	145.7 MB	Report
EGAF00008202687	fastq.gz	489.1 MB	Report
EGAF00008202688	fastq.gz	227.1 MB	Report
EGAF00008202689	fastq.gz	768.1 MB	Report
EGAF00008202690	fastq.gz	235.0 MB	Report
EGAF00008202691	fastq.gz	812.6 MB	Report
EGAF00008202692	fastq.gz	218.0 MB	Report
EGAF00008202693	fastq.gz	738.3 MB	Report
EGAF00008202694	fastq.gz	112.1 MB	Report
EGAF00008202695	fastq.gz	395.4 MB	Report
EGAF00008202696	fastq.gz	147.3 MB	Report
EGAF00008202697	fastq.gz	493.4 MB	Report
EGAF00008202698	fastq.gz	154.5 MB	Report
EGAF00008202699	fastq.gz	521.3 MB	Report
EGAF00008202700	fastq.gz	111.0 MB	Report
EGAF00008202701	fastq.gz	371.1 MB	Report
274 Files (115.7 GB)