About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNA-Seq dataset for Malignant rhabdoid study

Study describing the dynamics of chromatin organization within malignant rhabdoid tumors. This study describes how this chromatin organization changes upon SMARCB1 rescue within patient-derived organoid models from malignant rhabdoid tumors. Identification of a novel super-enhancer of MYC and identification of patient-specific enhancer utilization to activate MYC expression in these tumors.

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DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO_0006517

Data Access Agreement of data controlled by the Data Access Commitee of the Princess Maxima Center for Pediatric Oncology

The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes. Please contact the DAC (EGAC00001001864) for the most up to date policies.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007590 Other
  • Changed sample subject id
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008258145 fastq.gz 1.7 GB Report
EGAF00008258146 fastq.gz 1.8 GB Report
EGAF00008258147 fastq.gz 1.5 GB Report
EGAF00008258148 fastq.gz 1.6 GB Report
EGAF00008258149 fastq.gz 1.6 GB Report
EGAF00008258150 fastq.gz 1.8 GB Report
EGAF00008258151 fastq.gz 1.8 GB Report
EGAF00008258152 fastq.gz 1.7 GB Report
EGAF00008258153 fastq.gz 1.6 GB Report
EGAF00008258154 fastq.gz 1.7 GB Report
EGAF00008258155 fastq.gz 1.7 GB Report
EGAF00008258156 fastq.gz 1.8 GB Report
EGAF00008258157 fastq.gz 728.1 MB Report
EGAF00008258158 fastq.gz 785.8 MB Report
EGAF00008258159 fastq.gz 697.9 MB Report
EGAF00008258160 fastq.gz 746.8 MB Report
16 Files (23.3 GB)