About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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ATAC-Seq/Hi-C/4C-Seq dataset for Malignant rhabdoid study

Study describing the dynamics of chromatin organization within malignant rhabdoid tumors. This study describes how this chromatin organization changes upon SMARCB1 rescue within patient-derived organoid models from malignant rhabdoid tumors. Identification of a novel super-enhancer of MYC and identification of patient-specific enhancer utilization to activate MYC expression in these tumors.

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DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO_0006517

Data Access Agreement of data controlled by the Data Access Commitee of the Princess Maxima Center for Pediatric Oncology

The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes. Please contact the DAC (EGAC00001001864) for the most up to date policies.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007590 Other
  • Changed sample subject id
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008261918 fastq.gz 139.0 MB Report
EGAF00008261919 fastq.gz 59.0 MB Report
EGAF00008261920 fastq.gz 191.7 MB Report
EGAF00008261921 fastq.gz 60.6 MB Report
EGAF00008261922 fastq.gz 153.5 MB Report
EGAF00008261923 fastq.gz 125.9 MB Report
EGAF00008261924 fastq.gz 123.2 MB Report
EGAF00008261925 fastq.gz 135.2 MB Report
EGAF00008261926 fastq.gz 565.5 MB Report
EGAF00008261927 fastq.gz 963.9 MB Report
EGAF00008261928 fastq.gz 1.0 GB Report
EGAF00008261929 fastq.gz 617.7 MB Report
EGAF00008261930 fastq.gz 1.1 GB Report
EGAF00008261931 fastq.gz 987.6 MB Report
EGAF00008261932 fastq.gz 646.3 MB Report
EGAF00008261933 fastq.gz 898.1 MB Report
EGAF00008261934 fastq.gz 1.0 GB Report
EGAF00008261935 fastq.gz 1.6 GB Report
EGAF00008261936 fastq.gz 971.4 MB Report
EGAF00008261937 fastq.gz 937.2 MB Report
EGAF00008261938 fastq.gz 460.9 MB Report
EGAF00008261939 fastq.gz 1.5 GB Report
EGAF00008261940 fastq.gz 758.9 MB Report
EGAF00008261941 fastq.gz 1.1 GB Report
EGAF00008261942 fastq.gz 1.0 GB Report
EGAF00008261943 fastq.gz 1.1 GB Report
EGAF00008261944 fastq.gz 588.6 MB Report
EGAF00008261945 fastq.gz 479.1 MB Report
EGAF00008261946 fastq.gz 738.2 MB Report
EGAF00008261947 fastq.gz 602.8 MB Report
EGAF00008261988 fastq.gz 32.7 GB Report
EGAF00008261989 fastq.gz 35.1 GB Report
EGAF00008261990 fastq.gz 33.6 GB Report
EGAF00008261991 fastq.gz 36.7 GB Report
34 Files (158.7 GB)