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CCA ChIP-seq data (63 CCA, 8 normal, 19 cell-line)

Fastq files for H3K27ac ChIP-seq (with matched input-DNA control) for 63 CCAs, 8 normal bile duct tissues, 16 CCA cell-lines (including replicates), and 3 normal cholangiocyte cell-lines (including replicates). Library prep was performed with the NEBNext ChIP-seq library preparation kit. Each library (including matching input DNA) was sequenced to an average depth of 20 to 30 million raw reads on Illumina HiSeq4000 sequencer, with paired-end sequencing (except for 3 normal bile tissues done with single-end sequencing).

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Enhancer studies on CCA

DUO:0000006 health/medical/biomedical research and clinical care This primary category consent code indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry. DUO:0000020 collaboration required This requirement indicates that the requestor must agree to collaboration with the primary study investigator(s). DUO:0000021 ethics approval required This requirement indicates that the requestor must provide documentation of local IRB/ERB approval. DUO:0000018 not-for-profit use only This requirement indicates that use is limited to not-for-profit organizations. DUO:0000044 population origins or ancestry research prohibited This data use modifier indicates use for purposes of population, origin, or ancestry research is prohibited. DUO:0000045 not for profit organisation use only This data use modifier indicates that use of the data is limited to not-for-profit organizations. DUO:0000046 non-commercial use only This data use modifier indicates that use of the data is limited to not-for-profit use. DUO:0000027 project-specific restriction This requirement indicates that use is limited to use within an approved project. DUO:0000044 population origins or ancestry research prohibited This data use modifier indicates use for purposes of population, origin, or ancestry research is prohibited.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007309 Epigenetics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008263973 fastq.gz 2.4 GB
EGAF00008263974 fastq.gz 2.1 GB
EGAF00008263975 fastq.gz 2.0 GB
EGAF00008263976 fastq.gz 2.5 GB
EGAF00008263977 fastq.gz 1.8 GB
EGAF00008263978 fastq.gz 2.0 GB
EGAF00008264018 fq.gz 5.9 GB
EGAF00008264019 fq.gz 6.3 GB
EGAF00008264020 fq.gz 6.0 GB
EGAF00008264021 fq.gz 6.3 GB
EGAF00008264022 fastq.gz 1.2 GB
EGAF00008264023 fastq.gz 1.2 GB
EGAF00008264024 fastq.gz 1.7 GB
EGAF00008264025 fastq.gz 1.7 GB
EGAF00008264026 fq.gz 4.9 GB
EGAF00008264027 fq.gz 5.2 GB
EGAF00008264028 fq.gz 5.1 GB
EGAF00008264029 fq.gz 5.5 GB
EGAF00008264030 fq.gz 4.9 GB
EGAF00008264031 fq.gz 5.2 GB
EGAF00008264032 fq.gz 4.6 GB
EGAF00008264033 fq.gz 5.0 GB
EGAF00008264034 fq.gz 5.7 GB
EGAF00008264035 fq.gz 6.1 GB
EGAF00008264036 fq.gz 5.1 GB
EGAF00008264037 fq.gz 5.5 GB
EGAF00008264038 fq.gz 5.4 GB
EGAF00008264039 fq.gz 5.7 GB
EGAF00008264040 fq.gz 5.5 GB
EGAF00008264041 fq.gz 5.8 GB
EGAF00008264042 fq.gz 5.2 GB
EGAF00008264043 fq.gz 5.6 GB
EGAF00008264044 fq.gz 4.1 GB
EGAF00008264045 fq.gz 4.4 GB
EGAF00008264046 fq.gz 5.4 GB
EGAF00008264047 fq.gz 5.9 GB
EGAF00008264048 fq.gz 5.6 GB
EGAF00008264049 fq.gz 6.2 GB
EGAF00008264050 fq.gz 5.2 GB
EGAF00008264051 fq.gz 5.8 GB
EGAF00008264052 fq.gz 5.1 GB
EGAF00008264053 fq.gz 5.6 GB
EGAF00008264054 fq.gz 5.0 GB
EGAF00008264055 fq.gz 5.4 GB
EGAF00008264056 fq.gz 4.8 GB
EGAF00008264057 fq.gz 5.3 GB
EGAF00008264058 fq.gz 3.9 GB
EGAF00008264059 fq.gz 4.2 GB
EGAF00008264060 fq.gz 5.6 GB
EGAF00008264061 fq.gz 5.9 GB
EGAF00008264062 fq.gz 4.6 GB
EGAF00008264063 fq.gz 4.9 GB
EGAF00008264064 fq.gz 5.8 GB
EGAF00008264065 fq.gz 6.1 GB
EGAF00008264066 fq.gz 5.7 GB
EGAF00008264067 fq.gz 6.0 GB
EGAF00008264068 fq.gz 5.2 GB
EGAF00008264069 fq.gz 5.6 GB
EGAF00008264070 fq.gz 5.7 GB
EGAF00008264071 fq.gz 6.0 GB
EGAF00008264072 fq.gz 4.9 GB
EGAF00008264073 fq.gz 5.2 GB
EGAF00008264074 fq.gz 6.0 GB
EGAF00008264075 fq.gz 6.4 GB
EGAF00008264076 fq.gz 5.0 GB
EGAF00008264077 fq.gz 5.3 GB
EGAF00008264078 fq.gz 5.2 GB
EGAF00008264079 fq.gz 5.5 GB
EGAF00008264080 fq.gz 4.5 GB
EGAF00008264081 fq.gz 4.9 GB
EGAF00008264082 fq.gz 5.8 GB
EGAF00008264083 fq.gz 6.2 GB
EGAF00008264084 fq.gz 5.0 GB
EGAF00008264085 fq.gz 5.3 GB
EGAF00008264086 fq.gz 4.6 GB
EGAF00008264087 fq.gz 4.9 GB
EGAF00008264088 fq.gz 5.3 GB
EGAF00008264089 fq.gz 5.7 GB
EGAF00008264090 fq.gz 5.3 GB
EGAF00008264091 fq.gz 5.9 GB
EGAF00008264092 fq.gz 4.4 GB
EGAF00008264093 fq.gz 4.8 GB
EGAF00008264094 fq.gz 5.2 GB
EGAF00008264095 fq.gz 5.7 GB
EGAF00008264096 fq.gz 5.9 GB
EGAF00008264097 fq.gz 6.6 GB
EGAF00008264098 fq.gz 5.6 GB
EGAF00008264099 fq.gz 6.3 GB
EGAF00008264100 fq.gz 4.9 GB
EGAF00008264101 fq.gz 5.4 GB
EGAF00008264102 fq.gz 4.8 GB
EGAF00008264103 fq.gz 5.3 GB
EGAF00008264104 fq.gz 4.6 GB
EGAF00008264105 fq.gz 5.1 GB
EGAF00008264106 fq.gz 4.7 GB
EGAF00008264107 fq.gz 5.0 GB
EGAF00008264108 fq.gz 4.8 GB
EGAF00008264109 fq.gz 5.2 GB
EGAF00008264110 fq.gz 4.9 GB
EGAF00008264111 fq.gz 5.3 GB
EGAF00008264112 fq.gz 5.3 GB
EGAF00008264113 fq.gz 5.8 GB
EGAF00008264114 fq.gz 5.5 GB
EGAF00008264115 fq.gz 6.0 GB
EGAF00008264116 fq.gz 4.6 GB
EGAF00008264117 fq.gz 5.0 GB
EGAF00008264118 fq.gz 4.8 GB
EGAF00008264119 fq.gz 5.2 GB
EGAF00008264120 fq.gz 4.7 GB
EGAF00008264121 fq.gz 5.1 GB
EGAF00008264122 fq.gz 5.6 GB
EGAF00008264123 fq.gz 6.0 GB
EGAF00008264124 fq.gz 4.4 GB
EGAF00008264125 fq.gz 4.7 GB
EGAF00008264126 fq.gz 4.8 GB
EGAF00008264127 fq.gz 5.1 GB
EGAF00008264128 fq.gz 4.5 GB
EGAF00008264129 fq.gz 5.0 GB
EGAF00008264130 fq.gz 5.2 GB
EGAF00008264131 fq.gz 5.6 GB
EGAF00008264132 fq.gz 4.8 GB
EGAF00008264133 fq.gz 5.1 GB
EGAF00008264134 fq.gz 4.8 GB
EGAF00008264135 fq.gz 5.1 GB
EGAF00008264136 fq.gz 5.9 GB
EGAF00008264137 fq.gz 6.3 GB
EGAF00008264138 fq.gz 6.1 GB
EGAF00008264139 fq.gz 6.7 GB
EGAF00008264140 fq.gz 4.3 GB
EGAF00008264141 fq.gz 4.6 GB
EGAF00008264142 fq.gz 5.3 GB
EGAF00008264143 fq.gz 5.7 GB
EGAF00008264144 fq.gz 4.8 GB
EGAF00008264145 fq.gz 5.3 GB
EGAF00008264146 fq.gz 4.7 GB
EGAF00008264147 fq.gz 5.0 GB
EGAF00008264148 fq.gz 4.3 GB
EGAF00008264149 fq.gz 4.6 GB
EGAF00008264150 fq.gz 4.6 GB
EGAF00008264151 fq.gz 5.0 GB
EGAF00008264152 fq.gz 5.3 GB
EGAF00008264153 fq.gz 5.8 GB
EGAF00008264154 fq.gz 4.6 GB
EGAF00008264155 fq.gz 5.0 GB
EGAF00008264156 fq.gz 4.5 GB
EGAF00008264157 fq.gz 4.9 GB
EGAF00008264158 fq.gz 4.9 GB
EGAF00008264159 fq.gz 5.3 GB
EGAF00008264160 fq.gz 5.3 GB
EGAF00008264161 fq.gz 5.8 GB
EGAF00008264162 fq.gz 4.8 GB
EGAF00008264163 fq.gz 5.2 GB
EGAF00008264164 fq.gz 6.7 GB
EGAF00008264165 fq.gz 7.2 GB
EGAF00008264166 fq.gz 3.9 GB
EGAF00008264167 fq.gz 4.3 GB
EGAF00008264168 fq.gz 4.4 GB
EGAF00008264169 fq.gz 4.8 GB
EGAF00008264170 fq.gz 5.3 GB
EGAF00008264171 fq.gz 5.6 GB
EGAF00008264172 fq.gz 4.5 GB
EGAF00008264173 fq.gz 4.8 GB
EGAF00008264174 fq.gz 5.2 GB
EGAF00008264175 fq.gz 5.6 GB
EGAF00008264176 fq.gz 4.1 GB
EGAF00008264177 fq.gz 4.6 GB
EGAF00008264178 fq.gz 5.9 GB
EGAF00008264179 fq.gz 6.4 GB
EGAF00008264180 fq.gz 4.5 GB
EGAF00008264181 fq.gz 4.9 GB
EGAF00008264182 fq.gz 5.0 GB
EGAF00008264183 fq.gz 5.4 GB
EGAF00008264184 fq.gz 6.3 GB
EGAF00008264185 fq.gz 6.7 GB
EGAF00008264186 fq.gz 5.7 GB
EGAF00008264187 fq.gz 6.1 GB
EGAF00008264188 fq.gz 4.8 GB
EGAF00008264189 fq.gz 5.2 GB
EGAF00008264190 fq.gz 4.7 GB
EGAF00008264191 fq.gz 5.1 GB
EGAF00008264192 fq.gz 4.8 GB
EGAF00008264193 fq.gz 5.3 GB
EGAF00008264194 fq.gz 5.4 GB
EGAF00008264195 fq.gz 5.9 GB
EGAF00008264196 fq.gz 4.8 GB
EGAF00008264197 fq.gz 5.1 GB
EGAF00008264198 fq.gz 6.0 GB
EGAF00008264199 fq.gz 6.5 GB
EGAF00008264200 fq.gz 5.4 GB
EGAF00008264201 fq.gz 5.9 GB
EGAF00008264202 fq.gz 4.4 GB
EGAF00008264203 fq.gz 4.6 GB
EGAF00008264204 fq.gz 4.8 GB
EGAF00008264205 fq.gz 5.1 GB
EGAF00008264206 fq.gz 4.9 GB
EGAF00008264207 fq.gz 5.2 GB
EGAF00008264208 fq.gz 5.8 GB
EGAF00008264209 fq.gz 6.2 GB
EGAF00008264210 fq.gz 5.6 GB
EGAF00008264211 fq.gz 6.0 GB
EGAF00008264212 fq.gz 4.2 GB
EGAF00008264213 fq.gz 4.4 GB
EGAF00008264214 fq.gz 4.8 GB
EGAF00008264215 fq.gz 5.1 GB
EGAF00008264216 fq.gz 5.7 GB
EGAF00008264217 fq.gz 6.0 GB
EGAF00008264218 fq.gz 4.3 GB
EGAF00008264219 fq.gz 4.6 GB
EGAF00008264220 fq.gz 4.7 GB
EGAF00008264221 fq.gz 5.0 GB
EGAF00008264222 fq.gz 4.7 GB
EGAF00008264223 fq.gz 5.0 GB
EGAF00008264224 fq.gz 4.8 GB
EGAF00008264225 fq.gz 5.2 GB
EGAF00008264226 fq.gz 5.3 GB
EGAF00008264227 fq.gz 5.7 GB
EGAF00008264228 fq.gz 4.0 GB
EGAF00008264229 fq.gz 4.3 GB
EGAF00008264230 fq.gz 4.8 GB
EGAF00008264231 fq.gz 5.2 GB
EGAF00008264232 fq.gz 5.3 GB
EGAF00008264233 fq.gz 5.5 GB
EGAF00008264234 fq.gz 5.4 GB
EGAF00008264235 fq.gz 5.7 GB
EGAF00008264236 fq.gz 5.1 GB
EGAF00008264237 fq.gz 5.4 GB
EGAF00008264238 fq.gz 4.8 GB
EGAF00008264239 fq.gz 5.0 GB
EGAF00008264240 fq.gz 4.8 GB
EGAF00008264241 fq.gz 5.0 GB
EGAF00008264242 fq.gz 4.5 GB
EGAF00008264243 fq.gz 4.8 GB
EGAF00008264244 fq.gz 4.0 GB
EGAF00008264245 fq.gz 4.2 GB
EGAF00008264246 fq.gz 4.9 GB
EGAF00008264247 fq.gz 5.2 GB
EGAF00008264248 fq.gz 4.2 GB
EGAF00008264249 fq.gz 4.4 GB
EGAF00008264250 fq.gz 4.6 GB
EGAF00008264251 fq.gz 5.0 GB
EGAF00008264252 fq.gz 5.1 GB
EGAF00008264253 fq.gz 5.4 GB
EGAF00008264254 fq.gz 5.2 GB
EGAF00008264255 fq.gz 5.6 GB
EGAF00008264256 fq.gz 6.0 GB
EGAF00008264257 fq.gz 6.5 GB
EGAF00008264258 fq.gz 5.6 GB
EGAF00008264259 fq.gz 6.1 GB
EGAF00008264260 fq.gz 4.6 GB
EGAF00008264261 fq.gz 4.9 GB
EGAF00008264262 fq.gz 4.9 GB
EGAF00008264263 fq.gz 5.2 GB
EGAF00008264264 fq.gz 4.9 GB
EGAF00008264265 fq.gz 5.2 GB
EGAF00008264266 fq.gz 4.9 GB
EGAF00008264267 fq.gz 5.2 GB
EGAF00008264268 fq.gz 4.6 GB
EGAF00008264269 fq.gz 4.9 GB
EGAF00008264270 fq.gz 4.7 GB
EGAF00008264271 fq.gz 5.0 GB
EGAF00008264272 fq.gz 4.5 GB
EGAF00008264273 fq.gz 4.8 GB
EGAF00008264274 fq.gz 4.8 GB
EGAF00008264275 fq.gz 5.2 GB
EGAF00008264276 fq.gz 5.7 GB
EGAF00008264277 fq.gz 6.1 GB
EGAF00008264278 fq.gz 6.2 GB
EGAF00008264279 fq.gz 6.9 GB
EGAF00008264280 fq.gz 5.7 GB
EGAF00008264281 fq.gz 6.1 GB
EGAF00008264282 fq.gz 5.8 GB
EGAF00008264283 fq.gz 6.0 GB
EGAF00008264284 fq.gz 4.9 GB
EGAF00008264285 fq.gz 5.2 GB
EGAF00008264286 fq.gz 5.9 GB
EGAF00008264287 fq.gz 6.3 GB
EGAF00008264288 fq.gz 5.7 GB
EGAF00008264289 fq.gz 6.0 GB
EGAF00008264290 fastq.gz 1.2 GB
EGAF00008264291 fastq.gz 1.2 GB
EGAF00008264292 fastq.gz 1.4 GB
EGAF00008264293 fastq.gz 1.4 GB
EGAF00008264294 fastq.gz 1.4 GB
EGAF00008264295 fastq.gz 1.3 GB
EGAF00008264296 fastq.gz 1.5 GB
EGAF00008264297 fastq.gz 1.5 GB
EGAF00008264298 fastq.gz 1.4 GB
EGAF00008264299 fastq.gz 1.3 GB
EGAF00008264300 fastq.gz 1.5 GB
EGAF00008264301 fastq.gz 1.5 GB
EGAF00008264302 fastq.gz 1.4 GB
EGAF00008264303 fastq.gz 1.3 GB
EGAF00008264304 fastq.gz 1.2 GB
EGAF00008264305 fastq.gz 1.2 GB
EGAF00008264306 fastq.gz 1.3 GB
EGAF00008264307 fastq.gz 1.3 GB
EGAF00008264308 fastq.gz 945.9 MB
EGAF00008264309 fastq.gz 939.0 MB
EGAF00008264310 fastq.gz 1.3 GB
EGAF00008264311 fastq.gz 1.3 GB
EGAF00008264312 fastq.gz 1.4 GB
EGAF00008264313 fastq.gz 1.3 GB
EGAF00008264314 fastq.gz 1.1 GB
EGAF00008264315 fastq.gz 1.1 GB
EGAF00008264316 fastq.gz 1.4 GB
EGAF00008264317 fastq.gz 1.5 GB
EGAF00008264318 fastq.gz 789.6 MB
EGAF00008264319 fastq.gz 801.5 MB
EGAF00008264320 fastq.gz 934.5 MB
EGAF00008264321 fastq.gz 947.6 MB
EGAF00008264322 fastq.gz 1.5 GB
EGAF00008264323 fastq.gz 1.5 GB
EGAF00008264324 fastq.gz 2.1 GB
EGAF00008264325 fastq.gz 2.1 GB
EGAF00008264326 fastq.gz 1.0 GB
EGAF00008264327 fastq.gz 1.0 GB
EGAF00008264328 fastq.gz 999.4 MB
EGAF00008264329 fastq.gz 1.0 GB
EGAF00008264330 fastq.gz 1.0 GB
EGAF00008264331 fastq.gz 1.0 GB
EGAF00008264332 fastq.gz 858.6 MB
EGAF00008264333 fastq.gz 864.0 MB
EGAF00008264334 fastq.gz 920.2 MB
EGAF00008264335 fastq.gz 924.8 MB
EGAF00008264336 fastq.gz 1.1 GB
EGAF00008264337 fastq.gz 1.1 GB
EGAF00008264338 fastq.gz 1.4 GB
EGAF00008264339 fastq.gz 1.4 GB
EGAF00008264340 fastq.gz 1.1 GB
EGAF00008264341 fastq.gz 1.1 GB
EGAF00008264342 fastq.gz 1.1 GB
EGAF00008264343 fastq.gz 1.1 GB
EGAF00008264344 fastq.gz 1.1 GB
EGAF00008264345 fastq.gz 1.1 GB
EGAF00008264346 fastq.gz 1.2 GB
EGAF00008264347 fastq.gz 1.2 GB
EGAF00008264348 fastq.gz 1.1 GB
EGAF00008264349 fastq.gz 1.1 GB
EGAF00008264350 fastq.gz 1.1 GB
EGAF00008264351 fastq.gz 1.1 GB
EGAF00008264352 fastq.gz 1.1 GB
EGAF00008264353 fastq.gz 1.1 GB
EGAF00008264354 fastq.gz 1.1 GB
EGAF00008264355 fastq.gz 1.1 GB
EGAF00008264356 fastq.gz 1.0 GB
EGAF00008264357 fastq.gz 1.0 GB
EGAF00008264358 fq.gz 4.4 GB
EGAF00008264359 fq.gz 4.8 GB
EGAF00008264360 fq.gz 6.5 GB
EGAF00008264361 fq.gz 6.9 GB
EGAF00008264362 fq.gz 4.8 GB
EGAF00008264363 fq.gz 5.2 GB
EGAF00008264364 fq.gz 6.1 GB
EGAF00008264365 fq.gz 6.5 GB
354 Files (1.6 TB)