About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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PRADO trial - Personalized response-directed surgery and adjuvant therapy after neoadjuvant ipilimumab plus nivolumab in stage III melanoma

The dataset includes RNA sequencing data on PRE- treatment biopsies of lymph node metastasis (n=80) The technology used for sequencing is llumina HiSeq 2500

Request Access

Institutional review board of the Netherlands Cancer Institute

RNA-sequencing data generated during the study will be deposited in the European Genome-phenome Archive (EGA). Upon a scientifically sound request, data access can be obtained via the NKI’s scientific repository at repository@nki.nl, which will contact the corresponding author (C.U.B.). Data requests will be reviewed by the institutional review board of the Netherlands Cancer Institute (NKI) and will require the requesting researcher to sign a data access agreement with the NKI.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007601 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008271866 fastq.gz 2.4 GB Report
EGAF00008271867 fastq.gz 2.6 GB Report
EGAF00008271868 fastq.gz 2.7 GB Report
EGAF00008271869 fastq.gz 2.9 GB Report
EGAF00008271870 fastq.gz 1.9 GB Report
EGAF00008271871 fastq.gz 2.0 GB Report
EGAF00008271872 fastq.gz 2.7 GB Report
EGAF00008271873 fastq.gz 2.9 GB Report
EGAF00008271874 fastq.gz 2.5 GB Report
EGAF00008271875 fastq.gz 2.7 GB Report
EGAF00008271876 fastq.gz 2.8 GB Report
EGAF00008271877 fastq.gz 3.0 GB Report
EGAF00008271878 fastq.gz 2.5 GB Report
EGAF00008271879 fastq.gz 2.7 GB Report
EGAF00008271880 fastq.gz 2.5 GB Report
EGAF00008271881 fastq.gz 2.7 GB Report
EGAF00008271882 fastq.gz 3.0 GB Report
EGAF00008271883 fastq.gz 3.2 GB Report
EGAF00008271884 fastq.gz 2.5 GB Report
EGAF00008271885 fastq.gz 2.6 GB Report
EGAF00008271886 fastq.gz 2.4 GB Report
EGAF00008271887 fastq.gz 2.6 GB Report
EGAF00008271888 fastq.gz 2.9 GB Report
EGAF00008271889 fastq.gz 3.2 GB Report
EGAF00008271890 fastq.gz 2.4 GB Report
EGAF00008271891 fastq.gz 2.6 GB Report
EGAF00008271892 fastq.gz 3.1 GB Report
EGAF00008271893 fastq.gz 3.3 GB Report
EGAF00008271894 fastq.gz 2.7 GB Report
EGAF00008271895 fastq.gz 2.9 GB Report
EGAF00008271896 fastq.gz 2.0 GB Report
EGAF00008271897 fastq.gz 2.1 GB Report
EGAF00008271898 fastq.gz 2.1 GB Report
EGAF00008271899 fastq.gz 2.2 GB Report
EGAF00008271900 fastq.gz 2.4 GB Report
EGAF00008271901 fastq.gz 2.6 GB Report
EGAF00008271902 fastq.gz 2.8 GB Report
EGAF00008271903 fastq.gz 3.0 GB Report
EGAF00008271904 fastq.gz 2.8 GB Report
EGAF00008271905 fastq.gz 2.9 GB Report
EGAF00008271906 fastq.gz 15.9 GB Report
EGAF00008271907 fastq.gz 16.8 GB Report
EGAF00008271908 fastq.gz 2.1 GB Report
EGAF00008271909 fastq.gz 2.3 GB Report
EGAF00008271910 fastq.gz 3.0 GB Report
EGAF00008271911 fastq.gz 3.2 GB Report
EGAF00008271912 fastq.gz 2.6 GB Report
EGAF00008271913 fastq.gz 2.8 GB Report
EGAF00008271914 fastq.gz 2.9 GB Report
EGAF00008271915 fastq.gz 3.1 GB Report
EGAF00008271916 fastq.gz 2.6 GB Report
EGAF00008271917 fastq.gz 2.8 GB Report
EGAF00008271918 fastq.gz 2.2 GB Report
EGAF00008271919 fastq.gz 2.4 GB Report
EGAF00008271920 fastq.gz 3.1 GB Report
EGAF00008271921 fastq.gz 3.2 GB Report
EGAF00008271922 fastq.gz 2.5 GB Report
EGAF00008271923 fastq.gz 2.7 GB Report
EGAF00008271924 fastq.gz 2.4 GB Report
EGAF00008271925 fastq.gz 2.6 GB Report
EGAF00008271926 fastq.gz 2.5 GB Report
EGAF00008271927 fastq.gz 2.6 GB Report
EGAF00008271928 fastq.gz 2.7 GB Report
EGAF00008271929 fastq.gz 2.9 GB Report
EGAF00008271930 fastq.gz 2.1 GB Report
EGAF00008271931 fastq.gz 2.3 GB Report
EGAF00008271932 fastq.gz 2.3 GB Report
EGAF00008271933 fastq.gz 2.5 GB Report
EGAF00008271934 fastq.gz 2.3 GB Report
EGAF00008271935 fastq.gz 2.4 GB Report
EGAF00008271936 fastq.gz 2.0 GB Report
EGAF00008271937 fastq.gz 2.2 GB Report
EGAF00008271938 fastq.gz 2.8 GB Report
EGAF00008271939 fastq.gz 3.0 GB Report
EGAF00008271940 fastq.gz 2.9 GB Report
EGAF00008271941 fastq.gz 3.0 GB Report
EGAF00008271942 fastq.gz 2.1 GB Report
EGAF00008271943 fastq.gz 2.3 GB Report
EGAF00008271944 fastq.gz 3.0 GB Report
EGAF00008271945 fastq.gz 3.1 GB Report
EGAF00008271946 fastq.gz 3.4 GB Report
EGAF00008271947 fastq.gz 3.6 GB Report
EGAF00008271948 fastq.gz 2.2 GB Report
EGAF00008271949 fastq.gz 2.4 GB Report
EGAF00008271950 fastq.gz 3.4 GB Report
EGAF00008271951 fastq.gz 3.6 GB Report
EGAF00008271952 fastq.gz 3.0 GB Report
EGAF00008271953 fastq.gz 3.2 GB Report
EGAF00008271954 fastq.gz 2.8 GB Report
EGAF00008271955 fastq.gz 3.1 GB Report
EGAF00008271956 fastq.gz 2.2 GB Report
EGAF00008271957 fastq.gz 2.3 GB Report
EGAF00008271958 fastq.gz 3.3 GB Report
EGAF00008271959 fastq.gz 3.4 GB Report
EGAF00008271960 fastq.gz 2.5 GB Report
EGAF00008271961 fastq.gz 2.7 GB Report
EGAF00008271962 fastq.gz 2.3 GB Report
EGAF00008271963 fastq.gz 2.5 GB Report
EGAF00008271964 fastq.gz 2.7 GB Report
EGAF00008271965 fastq.gz 2.9 GB Report
EGAF00008271966 fastq.gz 2.7 GB Report
EGAF00008271967 fastq.gz 2.8 GB Report
EGAF00008271968 fastq.gz 2.7 GB Report
EGAF00008271969 fastq.gz 2.9 GB Report
EGAF00008271970 fastq.gz 3.8 GB Report
EGAF00008271971 fastq.gz 4.1 GB Report
EGAF00008271972 fastq.gz 2.8 GB Report
EGAF00008271973 fastq.gz 2.9 GB Report
EGAF00008271974 fastq.gz 2.6 GB Report
EGAF00008271975 fastq.gz 2.7 GB Report
EGAF00008271976 fastq.gz 2.2 GB Report
EGAF00008271977 fastq.gz 2.3 GB Report
EGAF00008271978 fastq.gz 3.0 GB Report
EGAF00008271979 fastq.gz 3.2 GB Report
EGAF00008271980 fastq.gz 3.8 GB Report
EGAF00008271981 fastq.gz 4.1 GB Report
EGAF00008271982 fastq.gz 2.7 GB Report
EGAF00008271983 fastq.gz 2.8 GB Report
EGAF00008271984 fastq.gz 3.1 GB Report
EGAF00008271985 fastq.gz 3.3 GB Report
EGAF00008271986 fastq.gz 3.0 GB Report
EGAF00008271987 fastq.gz 3.2 GB Report
EGAF00008271988 fastq.gz 2.6 GB Report
EGAF00008271989 fastq.gz 2.8 GB Report
EGAF00008271990 fastq.gz 3.8 GB Report
EGAF00008271991 fastq.gz 4.0 GB Report
EGAF00008271992 fastq.gz 3.7 GB Report
EGAF00008271993 fastq.gz 3.8 GB Report
EGAF00008271994 fastq.gz 3.1 GB Report
EGAF00008271995 fastq.gz 3.4 GB Report
EGAF00008271996 fastq.gz 2.7 GB Report
EGAF00008271997 fastq.gz 2.9 GB Report
EGAF00008271998 fastq.gz 3.1 GB Report
EGAF00008271999 fastq.gz 3.4 GB Report
EGAF00008272000 fastq.gz 3.1 GB Report
EGAF00008272001 fastq.gz 3.3 GB Report
EGAF00008272002 fastq.gz 3.6 GB Report
EGAF00008272003 fastq.gz 3.8 GB Report
EGAF00008272004 fastq.gz 3.2 GB Report
EGAF00008272005 fastq.gz 3.4 GB Report
EGAF00008272006 fastq.gz 2.2 GB Report
EGAF00008272007 fastq.gz 2.3 GB Report
EGAF00008272008 fastq.gz 3.6 GB Report
EGAF00008272009 fastq.gz 3.8 GB Report
EGAF00008272010 fastq.gz 3.3 GB Report
EGAF00008272011 fastq.gz 3.4 GB Report
EGAF00008272012 fastq.gz 4.4 GB Report
EGAF00008272013 fastq.gz 4.6 GB Report
EGAF00008272014 fastq.gz 3.4 GB Report
EGAF00008272015 fastq.gz 3.6 GB Report
EGAF00008272016 fastq.gz 2.1 GB Report
EGAF00008272017 fastq.gz 2.2 GB Report
EGAF00008272018 fastq.gz 1.6 GB Report
EGAF00008272019 fastq.gz 1.8 GB Report
EGAF00008272020 fastq.gz 3.1 GB Report
EGAF00008272021 fastq.gz 3.3 GB Report
EGAF00008272022 fastq.gz 3.5 GB Report
EGAF00008272023 fastq.gz 3.6 GB Report
EGAF00008272024 fastq.gz 2.8 GB Report
EGAF00008272025 fastq.gz 3.0 GB Report
160 Files (484.2 GB)