About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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scRNAseq of patients with chronic graft-versus-host-disease

This dataset contains 10 samples from 9 patients with chronic graft-versus-host disease (GVHD). Each sample is analysed with Chromium V(D)J and 5' Gene Expression Platform v1.1 (10X Genomics). The raw data includes fastq files for Gene expression and fastq files for V(D)J Expression. The processed data have been deposited in the ArrayExpress database at EMBL-EBI (www.ebi.ac.uk/arrayexpress) under accession number E-MTAB-13419.

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Hematology Research Unit Helsinki Data access policy

The proposed research use must be consistent with the specific data use limitation for this study. Data use requests will be evaluated based on the Helsinki University Hospital ethics committee permit concerning the samples.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007606 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008272912 fastq.gz 1.1 GB Report
EGAF00008272913 fastq.gz 3.2 GB Report
EGAF00008272914 fastq.gz 7.9 GB Report
EGAF00008272915 fastq.gz 1.1 GB Report
EGAF00008272916 fastq.gz 3.2 GB Report
EGAF00008272917 fastq.gz 7.9 GB Report
EGAF00008272918 fastq.gz 1.1 GB Report
EGAF00008272919 fastq.gz 3.2 GB Report
EGAF00008272920 fastq.gz 7.8 GB Report
EGAF00008272921 fastq.gz 1.1 GB Report
EGAF00008272922 fastq.gz 3.2 GB Report
EGAF00008272923 fastq.gz 7.8 GB Report
EGAF00008272924 fastq.gz 1.2 GB Report
EGAF00008272925 fastq.gz 3.8 GB Report
EGAF00008272926 fastq.gz 9.4 GB Report
EGAF00008272927 fastq.gz 1.2 GB Report
EGAF00008272928 fastq.gz 3.8 GB Report
EGAF00008272929 fastq.gz 9.3 GB Report
EGAF00008272930 fastq.gz 1.2 GB Report
EGAF00008272931 fastq.gz 3.8 GB Report
EGAF00008272932 fastq.gz 9.3 GB Report
EGAF00008272933 fastq.gz 1.2 GB Report
EGAF00008272934 fastq.gz 3.8 GB Report
EGAF00008272935 fastq.gz 9.3 GB Report
EGAF00008272936 fastq.gz 169.0 MB Report
EGAF00008272937 fastq.gz 500.4 MB Report
EGAF00008272938 fastq.gz 1.1 GB Report
EGAF00008272939 fastq.gz 171.0 MB Report
EGAF00008272940 fastq.gz 510.3 MB Report
EGAF00008272941 fastq.gz 1.2 GB Report
EGAF00008272942 fastq.gz 150.3 MB Report
EGAF00008272943 fastq.gz 459.5 MB Report
EGAF00008272944 fastq.gz 996.4 MB Report
EGAF00008272945 fastq.gz 151.5 MB Report
EGAF00008272946 fastq.gz 466.5 MB Report
EGAF00008272947 fastq.gz 1.0 GB Report
EGAF00008272948 fastq.gz 1.5 GB Report
EGAF00008272949 fastq.gz 4.8 GB Report
EGAF00008272950 fastq.gz 11.7 GB Report
EGAF00008272951 fastq.gz 1.5 GB Report
EGAF00008272952 fastq.gz 4.8 GB Report
EGAF00008272953 fastq.gz 11.7 GB Report
EGAF00008272954 fastq.gz 1.5 GB Report
EGAF00008272955 fastq.gz 4.8 GB Report
EGAF00008272956 fastq.gz 11.6 GB Report
EGAF00008272957 fastq.gz 1.5 GB Report
EGAF00008272958 fastq.gz 4.8 GB Report
EGAF00008272959 fastq.gz 11.6 GB Report
EGAF00008272960 fastq.gz 181.3 MB Report
EGAF00008272961 fastq.gz 535.0 MB Report
EGAF00008272962 fastq.gz 1.2 GB Report
EGAF00008272963 fastq.gz 183.8 MB Report
EGAF00008272964 fastq.gz 545.8 MB Report
EGAF00008272965 fastq.gz 1.2 GB Report
EGAF00008272966 fastq.gz 1.3 GB Report
EGAF00008272967 fastq.gz 3.9 GB Report
EGAF00008272968 fastq.gz 9.6 GB Report
EGAF00008272969 fastq.gz 1.3 GB Report
EGAF00008272970 fastq.gz 3.9 GB Report
EGAF00008272971 fastq.gz 9.6 GB Report
EGAF00008272972 fastq.gz 1.3 GB Report
EGAF00008272973 fastq.gz 3.9 GB Report
EGAF00008272974 fastq.gz 9.6 GB Report
EGAF00008272975 fastq.gz 1.3 GB Report
EGAF00008272976 fastq.gz 3.9 GB Report
EGAF00008272977 fastq.gz 9.6 GB Report
EGAF00008272978 fastq.gz 151.4 MB Report
EGAF00008272979 fastq.gz 438.7 MB Report
EGAF00008272980 fastq.gz 981.6 MB Report
EGAF00008272981 fastq.gz 152.3 MB Report
EGAF00008272982 fastq.gz 445.3 MB Report
EGAF00008272983 fastq.gz 994.0 MB Report
EGAF00008272984 fastq.gz 1.3 GB Report
EGAF00008272985 fastq.gz 3.8 GB Report
EGAF00008272986 fastq.gz 9.2 GB Report
EGAF00008272987 fastq.gz 1.3 GB Report
EGAF00008272988 fastq.gz 3.8 GB Report
EGAF00008272989 fastq.gz 9.2 GB Report
EGAF00008272990 fastq.gz 1.3 GB Report
EGAF00008272991 fastq.gz 3.8 GB Report
EGAF00008272992 fastq.gz 9.1 GB Report
EGAF00008272993 fastq.gz 1.3 GB Report
EGAF00008272994 fastq.gz 3.8 GB Report
EGAF00008272995 fastq.gz 9.2 GB Report
EGAF00008272996 fastq.gz 189.5 MB Report
EGAF00008272997 fastq.gz 577.9 MB Report
EGAF00008272998 fastq.gz 1.3 GB Report
EGAF00008272999 fastq.gz 191.2 MB Report
EGAF00008273000 fastq.gz 587.0 MB Report
EGAF00008273001 fastq.gz 1.3 GB Report
EGAF00008273002 fastq.gz 1.4 GB Report
EGAF00008273003 fastq.gz 4.5 GB Report
EGAF00008273004 fastq.gz 11.0 GB Report
EGAF00008273005 fastq.gz 1.4 GB Report
EGAF00008273006 fastq.gz 4.5 GB Report
EGAF00008273007 fastq.gz 11.0 GB Report
EGAF00008273008 fastq.gz 1.4 GB Report
EGAF00008273009 fastq.gz 4.5 GB Report
EGAF00008273010 fastq.gz 10.9 GB Report
EGAF00008273011 fastq.gz 1.4 GB Report
EGAF00008273012 fastq.gz 4.5 GB Report
EGAF00008273013 fastq.gz 10.9 GB Report
EGAF00008273014 fastq.gz 183.6 MB Report
EGAF00008273015 fastq.gz 550.3 MB Report
EGAF00008273016 fastq.gz 1.3 GB Report
EGAF00008273017 fastq.gz 185.0 MB Report
EGAF00008273018 fastq.gz 559.4 MB Report
EGAF00008273019 fastq.gz 1.3 GB Report
EGAF00008273020 fastq.gz 1.2 GB Report
EGAF00008273021 fastq.gz 3.8 GB Report
EGAF00008273022 fastq.gz 9.2 GB Report
EGAF00008273023 fastq.gz 1.2 GB Report
EGAF00008273024 fastq.gz 3.8 GB Report
EGAF00008273025 fastq.gz 9.2 GB Report
EGAF00008273026 fastq.gz 1.2 GB Report
EGAF00008273027 fastq.gz 3.8 GB Report
EGAF00008273028 fastq.gz 9.1 GB Report
EGAF00008273029 fastq.gz 1.2 GB Report
EGAF00008273030 fastq.gz 3.8 GB Report
EGAF00008273031 fastq.gz 9.2 GB Report
EGAF00008273032 fastq.gz 213.8 MB Report
EGAF00008273033 fastq.gz 609.7 MB Report
EGAF00008273034 fastq.gz 1.4 GB Report
EGAF00008273035 fastq.gz 216.6 MB Report
EGAF00008273036 fastq.gz 621.0 MB Report
EGAF00008273037 fastq.gz 1.4 GB Report
EGAF00008273038 fastq.gz 1.3 GB Report
EGAF00008273039 fastq.gz 4.0 GB Report
EGAF00008273040 fastq.gz 9.7 GB Report
EGAF00008273041 fastq.gz 1.3 GB Report
EGAF00008273042 fastq.gz 4.0 GB Report
EGAF00008273043 fastq.gz 9.7 GB Report
EGAF00008273044 fastq.gz 1.3 GB Report
EGAF00008273045 fastq.gz 4.0 GB Report
EGAF00008273046 fastq.gz 9.6 GB Report
EGAF00008273047 fastq.gz 1.3 GB Report
EGAF00008273048 fastq.gz 4.0 GB Report
EGAF00008273049 fastq.gz 9.7 GB Report
EGAF00008273050 fastq.gz 170.3 MB Report
EGAF00008273051 fastq.gz 491.6 MB Report
EGAF00008273052 fastq.gz 1.1 GB Report
EGAF00008273053 fastq.gz 171.7 MB Report
EGAF00008273054 fastq.gz 498.5 MB Report
EGAF00008273055 fastq.gz 1.1 GB Report
EGAF00008273056 fastq.gz 1.1 GB Report
EGAF00008273057 fastq.gz 3.2 GB Report
EGAF00008273058 fastq.gz 7.9 GB Report
EGAF00008273059 fastq.gz 1.0 GB Report
EGAF00008273060 fastq.gz 3.2 GB Report
EGAF00008273061 fastq.gz 7.8 GB Report
EGAF00008273062 fastq.gz 1.0 GB Report
EGAF00008273063 fastq.gz 3.2 GB Report
EGAF00008273064 fastq.gz 7.8 GB Report
EGAF00008273065 fastq.gz 1.0 GB Report
EGAF00008273066 fastq.gz 3.2 GB Report
EGAF00008273067 fastq.gz 7.8 GB Report
EGAF00008273068 fastq.gz 75.2 MB Report
EGAF00008273069 fastq.gz 209.7 MB Report
EGAF00008273070 fastq.gz 459.7 MB Report
EGAF00008273071 fastq.gz 75.6 MB Report
EGAF00008273072 fastq.gz 212.5 MB Report
EGAF00008273073 fastq.gz 464.4 MB Report
EGAF00008273074 fastq.gz 1.2 GB Report
EGAF00008273075 fastq.gz 3.9 GB Report
EGAF00008273076 fastq.gz 9.5 GB Report
EGAF00008273077 fastq.gz 1.2 GB Report
EGAF00008273078 fastq.gz 3.9 GB Report
EGAF00008273079 fastq.gz 9.5 GB Report
EGAF00008273080 fastq.gz 1.2 GB Report
EGAF00008273081 fastq.gz 3.8 GB Report
EGAF00008273082 fastq.gz 9.4 GB Report
EGAF00008273083 fastq.gz 1.2 GB Report
EGAF00008273084 fastq.gz 3.9 GB Report
EGAF00008273085 fastq.gz 9.5 GB Report
EGAF00008273086 fastq.gz 87.4 MB Report
EGAF00008273087 fastq.gz 238.7 MB Report
EGAF00008273088 fastq.gz 522.8 MB Report
EGAF00008273089 fastq.gz 88.5 MB Report
EGAF00008273090 fastq.gz 242.6 MB Report
EGAF00008273091 fastq.gz 530.5 MB Report
180 Files (617.9 GB)