The long term effects of chemotherapy on normal blood - Nanoseq dataset
In developed countries, ~10% of individuals are exposed to systemic chemotherapy for cancer and other diseases. Many chemotherapeutic agents act by increasing DNA damage in cancer cells, hence triggering cell death. However, there is limited understanding of the extent and consequences of collateral DNA damage to normal tissues. To investigate the impact of chemotherapy on mutation burdens and cell population structure of a normal tissue we sequenced blood cell genomes from 23 individuals, aged 3-80 years, treated with a range of chemotherapy regimens. Substantial additional mutation loads with characteristic mutational signatures were imposed by some chemotherapeutic agents, but there were differences in burden between different classes of agent, different agents of the same class and different blood cell types. Chemotherapy also induced premature changes in the cell population structure of normal blood, similar to those of normal ageing. The results constitute an initial survey of the long-term biological consequences of cytotoxic agents to which a substantial fraction of the population is exposed during the course of their disease management, raising mechanistic questions and highlighting opportunities for mitigation of adverse effects.
- 1 sample
- DAC: EGAC00001000000
- Technology: Illumina NovaSeq 6000
- PUB DUO:0000019 (version: 2021-02-23)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
- US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
- IS DUO:0000028 (version: 2021-02-23)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS00001004330 | Cancer Genomics | |
EGAS00001005521 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF00008322317 | cram | 2.3 GB | ||
EGAF00008322320 | cram | 1.9 GB | ||
EGAF00008322338 | cram | 1.6 GB | ||
EGAF00008322356 | cram | 2.1 GB | ||
EGAF00008322359 | cram | 1.6 GB | ||
EGAF00008322361 | cram | 2.0 GB | ||
EGAF00008322362 | cram | 1.8 GB | ||
EGAF00008322363 | cram | 1.5 GB | ||
EGAF00008322374 | cram | 1.8 GB | ||
EGAF00008322391 | cram | 1.7 GB | ||
EGAF00008322393 | cram | 1.8 GB | ||
EGAF00008322396 | cram | 1.6 GB | ||
EGAF00008322397 | cram | 1.6 GB | ||
EGAF00008322398 | cram | 1.7 GB | ||
EGAF00008322399 | cram | 1.9 GB | ||
EGAF00008322401 | cram | 1.7 GB | ||
EGAF00008322406 | cram | 2.3 GB | ||
EGAF00008322409 | cram | 1.9 GB | ||
EGAF00008322427 | cram | 1.6 GB | ||
EGAF00008322445 | cram | 2.1 GB | ||
EGAF00008322448 | cram | 1.6 GB | ||
EGAF00008322450 | cram | 2.0 GB | ||
EGAF00008322451 | cram | 1.8 GB | ||
EGAF00008322452 | cram | 1.5 GB | ||
EGAF00008322463 | cram | 1.8 GB | ||
EGAF00008322480 | cram | 1.7 GB | ||
EGAF00008322482 | cram | 1.8 GB | ||
EGAF00008322485 | cram | 1.7 GB | ||
EGAF00008322486 | cram | 1.6 GB | ||
EGAF00008322487 | cram | 1.7 GB | ||
EGAF00008322488 | cram | 1.9 GB | ||
EGAF00008322490 | cram | 1.7 GB | ||
EGAF00008322495 | cram | 8.6 GB | ||
EGAF00008322498 | cram | 7.0 GB | ||
EGAF00008322516 | cram | 6.1 GB | ||
EGAF00008322534 | cram | 7.6 GB | ||
EGAF00008322537 | cram | 5.9 GB | ||
EGAF00008322539 | cram | 7.3 GB | ||
EGAF00008322540 | cram | 6.5 GB | ||
EGAF00008322541 | cram | 5.7 GB | ||
EGAF00008322552 | cram | 6.8 GB | ||
EGAF00008322569 | cram | 6.2 GB | ||
EGAF00008322571 | cram | 6.6 GB | ||
EGAF00008322574 | cram | 6.2 GB | ||
EGAF00008322575 | cram | 5.7 GB | ||
EGAF00008322576 | cram | 6.3 GB | ||
EGAF00008322577 | cram | 7.3 GB | ||
EGAF00008322579 | cram | 6.7 GB | ||
EGAF00008397361 | cram | 29.2 GB | ||
EGAF00008397362 | cram | 26.0 GB | ||
EGAF00008397363 | cram | 31.5 GB | ||
EGAF00008397364 | cram | 31.3 GB | ||
EGAF00008397365 | cram | 26.3 GB | ||
EGAF00008397366 | cram | 33.9 GB | ||
EGAF00008397367 | cram | 30.8 GB | ||
EGAF00008397368 | cram | 30.4 GB | ||
EGAF00008397369 | cram | 27.3 GB | ||
EGAF00008397370 | cram | 31.1 GB | ||
EGAF00008397371 | cram | 29.6 GB | ||
EGAF00008397372 | cram | 27.8 GB | ||
EGAF00008397373 | cram | 34.6 GB | ||
EGAF00008397374 | cram | 25.8 GB | ||
EGAF00008397375 | cram | 32.1 GB | ||
EGAF00008397376 | cram | 31.2 GB | ||
EGAF00008397397 | cram | 27.8 GB | ||
EGAF00008397398 | cram | 23.9 GB | ||
EGAF00008397399 | cram | 30.0 GB | ||
EGAF00008397400 | cram | 35.8 GB | ||
EGAF00008397401 | cram | 26.2 GB | ||
EGAF00008397402 | cram | 22.5 GB | ||
EGAF00008397403 | cram | 28.8 GB | ||
EGAF00008397404 | cram | 31.7 GB | ||
EGAF00008397405 | cram | 34.1 GB | ||
EGAF00008397406 | cram | 27.8 GB | ||
EGAF00008397407 | cram | 28.8 GB | ||
EGAF00008397408 | cram | 32.0 GB | ||
EGAF00008397409 | cram | 30.9 GB | ||
EGAF00008397410 | cram | 27.2 GB | ||
EGAF00008397411 | cram | 25.7 GB | ||
EGAF00008397412 | cram | 28.6 GB | ||
EGAF00008397413 | cram | 28.4 GB | ||
EGAF00008397414 | cram | 30.2 GB | ||
EGAF00008397415 | cram | 26.6 GB | ||
EGAF00008397416 | cram | 31.7 GB | ||
EGAF00008397417 | cram | 26.9 GB | ||
EGAF00008397418 | cram | 28.0 GB | ||
EGAF00008397419 | cram | 26.0 GB | ||
EGAF00008397420 | cram | 34.2 GB | ||
EGAF00008397421 | cram | 26.4 GB | ||
EGAF00008397422 | cram | 26.9 GB | ||
EGAF00008397423 | cram | 22.4 GB | ||
EGAF00008397424 | cram | 32.5 GB | ||
EGAF00008397425 | cram | 28.8 GB | ||
EGAF00008397426 | cram | 31.9 GB | ||
EGAF00008397427 | cram | 29.2 GB | ||
EGAF00008397428 | cram | 29.5 GB | ||
EGAF00008397429 | cram | 33.8 GB | ||
EGAF00008397430 | cram | 30.0 GB | ||
EGAF00008397431 | cram | 30.4 GB | ||
EGAF00008397432 | cram | 33.5 GB | ||
EGAF00008397433 | cram | 31.8 GB | ||
EGAF00008397434 | cram | 28.0 GB | ||
EGAF00008397435 | cram | 28.4 GB | ||
EGAF00008397436 | cram | 29.5 GB | ||
EGAF00008397437 | cram | 28.0 GB | ||
EGAF00008397438 | cram | 26.6 GB | ||
EGAF00008397439 | cram | 33.4 GB | ||
EGAF00008397440 | cram | 35.4 GB | ||
EGAF00008397441 | cram | 29.5 GB | ||
EGAF00008397442 | cram | 32.8 GB | ||
EGAF00008397443 | cram | 25.4 GB | ||
EGAF00008397444 | cram | 30.1 GB | ||
EGAF00008397445 | cram | 35.2 GB | ||
EGAF00008397446 | cram | 30.1 GB | ||
EGAF00008397447 | cram | 29.3 GB | ||
EGAF00008397448 | cram | 31.3 GB | ||
EGAF00008397449 | cram | 32.3 GB | ||
EGAF00008397450 | cram | 31.1 GB | ||
EGAF00008397451 | cram | 28.5 GB | ||
119 Files (2.3 TB) |