About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WGS Dataset of Organoid drug profiling identifies methotrexate as a therapy for SCCOHT, a rare pediatric cancer

We generated and characterized tumoroids from small cell carcinoma of the ovary, hypercalcemic type. Furthermore, we identified a drug that is selective and effective against SCCOHT tumoroids.

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DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO_0006517

Data Access Agreement of data controlled by the Data Access Commitee of the Princess Maxima Center for Pediatric Oncology

The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes. Please contact the DAC (EGAC00001001864) for the most up to date policies.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007911 Other
  • Changed sample subject id
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  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008619365 cram 45.8 GB
EGAF00008619367 cram 65.4 GB
EGAF00008619368 cram 59.4 GB
EGAF00008619370 cram 55.5 GB
EGAF00008619372 cram 81.9 GB
EGAF00008619374 cram 18.9 GB
EGAF00008619375 cram 19.0 GB
EGAF00008619376 cram 15.9 GB
EGAF00008619377 cram 18.6 GB
EGAF00008619381 cram 13.3 GB
EGAF00008619382 cram 16.6 GB
EGAF00008619383 cram 16.5 GB
EGAF00008619389 cram 29.0 GB
13 Files (455.8 GB)