About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

Dataset for transcriptome sequencing of chordoma cells

This dataset contains transcriptome sequencing for 15 samples from chordoma cells. The sequencing was performed on Illumina HiSeq 4000 and Illumina NovaSeq 6000. The sequencing was always paired.

Request Access

DUO:0000026
version: 2019-01-07

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001008140 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008740489 fastq.gz 2.3 GB
EGAF00008740490 fastq.gz 2.3 GB
EGAF00008740491 fastq.gz 2.4 GB
EGAF00008740492 fastq.gz 2.4 GB
EGAF00008740493 fastq.gz 2.5 GB
EGAF00008740494 fastq.gz 2.0 GB
EGAF00008740495 fastq.gz 2.5 GB
EGAF00008740496 fastq.gz 2.1 GB
EGAF00008740497 fastq.gz 2.1 GB
EGAF00008740498 fastq.gz 3.4 GB
EGAF00008740499 fastq.gz 2.0 GB
EGAF00008740500 fastq.gz 3.6 GB
EGAF00008740501 fastq.gz 3.5 GB
EGAF00008740502 fastq.gz 1.7 GB
EGAF00008740503 fastq.gz 1.7 GB
EGAF00008740504 fastq.gz 4.6 GB
EGAF00008740505 fastq.gz 2.7 GB
EGAF00008740506 fastq.gz 4.0 GB
EGAF00008740507 fastq.gz 3.9 GB
EGAF00008740508 fastq.gz 2.7 GB
EGAF00008740509 fastq.gz 2.8 GB
EGAF00008740510 fastq.gz 5.3 GB
EGAF00008740511 fastq.gz 2.1 GB
EGAF00008740512 fastq.gz 3.8 GB
EGAF00008740513 fastq.gz 3.6 GB
EGAF00008740514 fastq.gz 2.1 GB
EGAF00008740515 fastq.gz 4.9 GB
EGAF00008740516 fastq.gz 1.8 GB
EGAF00008740517 fastq.gz 1.8 GB
EGAF00008740518 fastq.gz 4.6 GB
EGAF00008740519 fastq.gz 2.8 GB
EGAF00008740520 fastq.gz 3.8 GB
EGAF00008740521 fastq.gz 2.6 GB
EGAF00008740522 fastq.gz 2.2 GB
EGAF00008740523 fastq.gz 2.6 GB
EGAF00008740524 fastq.gz 4.0 GB
EGAF00008740525 fastq.gz 4.1 GB
EGAF00008740526 fastq.gz 2.8 GB
EGAF00008740527 fastq.gz 2.1 GB
EGAF00008740528 fastq.gz 2.7 GB
EGAF00008740529 fastq.gz 2.2 GB
EGAF00008740530 fastq.gz 2.1 GB
EGAF00008740531 fastq.gz 4.8 GB
EGAF00008740532 fastq.gz 5.5 GB
44 Files (131.4 GB)