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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Whole-genome sequencing of rhabdomyosarcoma tumouroids (2025-09-30)

This study investigates high-risk rhabdomyosarcoma (RMS) using multiple single-cell and spatial genomic technologies. We generated and analysed single-cell and single-nucleus RNA-sequencing, chromatin accessibility, and spatial transcriptomics data from primary tumours and validation samples. These datasets characterise cellular diversity within rhabdomyosarcoma and identify cell states associated with aggressive disease. The data support research into tumour biology, risk stratification, and therapeutic target discovery. This repository houses the whole-genome sequencing of RMS tumoroids data. . This dataset contains all the data available for this study on 2025-09-30.

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Wellcome Trust Sanger Institute Data Sharing Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001008270 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008934542 cram 10.1 GB
EGAF00008934543 cram 10.3 GB
EGAF00008934544 cram 9.6 GB
EGAF00008934545 cram 12.1 GB
EGAF00008934546 cram 9.2 GB
EGAF00008934547 cram 11.1 GB
EGAF00008934548 cram 9.6 GB
EGAF00008934549 cram 10.8 GB
EGAF00008934550 cram 10.1 GB
EGAF00008934551 cram 10.3 GB
EGAF00008934552 cram 9.6 GB
EGAF00008934553 cram 12.0 GB
EGAF00008934554 cram 9.2 GB
EGAF00008934555 cram 11.1 GB
EGAF00008934556 cram 9.6 GB
EGAF00008934557 cram 10.8 GB
16 Files (165.3 GB)